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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • cytosol 1
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_01s0010g03710.t01 Wine grape nucleus 54.41 53.04
Os02t0139400-01 Rice nucleus 28.6 47.16
GSMUA_Achr9P14160_001 Banana nucleus 45.16 45.85
KRG97402 Soybean nucleus 42.58 45.73
GSMUA_Achr4P12470_001 Banana nucleus 34.41 45.71
GSMUA_Achr4P05720_001 Banana nucleus 33.55 45.09
GSMUA_Achr9P23140_001 Banana nucleus 40.22 44.95
KRH31506 Soybean nucleus 42.58 44.7
GSMUA_Achr5P22630_001 Banana nucleus 42.58 43.61
GSMUA_Achr3P05360_001 Banana nucleus 43.44 43.53
GSMUA_Achr3P27750_001 Banana nucleus 43.23 42.86
GSMUA_Achr5P21990_001 Banana nucleus 39.78 42.73
GSMUA_Achr10P... Banana nucleus 44.09 40.67
OQU77017 Sorghum nucleus 37.63 39.77
TraesCS6B01G183400.1 Wheat nucleus 27.96 39.76
GSMUA_Achr6P36010_001 Banana nucleus 37.42 39.73
HORVU6Hr1G031450.6 Barley nucleus 27.74 39.57
EES04609 Sorghum nucleus 28.6 39.47
TraesCS6D01G145200.1 Wheat nucleus 27.53 39.38
TraesCS6A01G155300.1 Wheat nucleus 27.74 39.33
TraesCS6D01G098500.1 Wheat nucleus 40.0 39.32
VIT_10s0003g00050.t01 Wine grape nucleus 11.83 39.29
TraesCS6A01G110100.2 Wheat nucleus 40.0 39.16
TraesCS6B01G138400.1 Wheat nucleus 39.78 39.11
Zm00001d015410_P002 Maize nucleus 27.31 38.25
CDY27611 Canola nucleus 29.89 38.08
Zm00001d053775_P001 Maize nucleus 27.1 38.07
Zm00001d014698_P001 Maize nucleus 35.91 38.04
Os06t0703500-02 Rice nucleus 38.71 37.89
Bra032822.1-P Field mustard nucleus 29.46 37.53
Os02t0174100-02 Rice nucleus 20.22 37.45
CDX84928 Canola nucleus 29.25 37.36
HORVU6Hr1G019700.3 Barley nucleus 40.43 37.08
CDY27612 Canola nucleus 26.02 36.78
Bra030040.1-P Field mustard nucleus 30.75 36.67
CDY03913 Canola nucleus 29.25 36.66
Bra032823.1-P Field mustard nucleus 25.81 36.59
CDY15713 Canola nucleus 30.54 36.41
EES04495 Sorghum nucleus 37.42 36.25
CDX84927 Canola nucleus 28.6 36.24
GSMUA_Achr10P... Banana nucleus 37.85 36.14
CDY67700 Canola nucleus 26.88 36.13
AT1G27370.1 Thale cress nucleus 30.54 35.86
CDY15712 Canola nucleus 28.6 35.56
Bra030041.1-P Field mustard nucleus 28.39 35.29
Bra010949.1-P Field mustard nucleus 27.74 35.25
GSMUA_Achr8P23820_001 Banana nucleus 39.78 35.1
CDY03914 Canola nucleus 27.96 34.95
CDY11816 Canola nucleus 27.1 34.52
Os06t0663500-00 Rice nucleus 25.16 34.11
AT1G27360.1 Thale cress nucleus 28.17 33.33
VIT_12s0028g03350.t01 Wine grape nucleus 11.83 32.54
Zm00001d015233_P001 Maize mitochondrion, nucleus, plastid 35.7 31.26
Zm00001d053890_P003 Maize nucleus 31.83 30.71
VIT_08s0007g06270.t01 Wine grape nucleus 24.52 30.08
VIT_04s0210g00170.t01 Wine grape nucleus 12.9 28.99
VIT_19s0014g02350.t01 Wine grape nucleus 12.47 28.43
VIT_15s0021g02300.t01 Wine grape nucleus 17.2 26.32
VIT_01s0010g03910.t01 Wine grape nucleus 20.0 23.91
VIT_14s0068g01780.t01 Wine grape nucleus 19.35 23.81
VIT_15s0021g02290.t01 Wine grape nucleus 19.35 22.56
VIT_17s0000g01260.t01 Wine grape nucleus 17.63 20.45
VIT_17s0000g05020.t01 Wine grape nucleus 22.15 18.49
VIT_01s0011g00130.t01 Wine grape nucleus 17.42 15.98
Protein Annotations
EntrezGene:100246757wikigene:100246757MapMan:15.5.18Gene3D:4.10.1100.10ProteinID:ADG36381ProteinID:ADG36381.1
ProteinID:CCB48909ProteinID:CCB48909.1UniProt:F6H9P0EMBL:FN595502GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0046872EMBL:HM018601InterPro:IPR004333InterPro:IPR036893EntrezGene:LOC100246757wikigene:LOC100246757
PFAM:PF03110PFscan:PS51141PANTHER:PTHR31251PANTHER:PTHR31251:SF12InterPro:SBP_domInterPro:SBP_sf
SUPFAM:SSF103612TIGR:TC63294UniParc:UPI00019843C9ArrayExpress:VIT_11s0065g00170EnsemblPlantsGene:VIT_11s0065g00170EnsemblPlants:VIT_11s0065g00170.t01
unigene:Vvi.8167SEG:seg::::
Description
No Description!
Coordinates
chr11:-:13588641..13607268
Molecular Weight (calculated)
51453.9 Da
IEP (calculated)
7.935
GRAVY (calculated)
-0.697
Length
465 amino acids
Sequence
(BLAST)
001: MEWNLRTPSE WDWETLTAFN TKAFEFPGRV QLSNHDIEVD GGVDNGSVYS SGGGGFSGSD LGHGSSSRSS ISVSGDSSLK EGIKKFRNVE DFHKDFSENK
101: ELIRVGSSGN CPTVGTSDGS GEAMIGLKLG KRTYFEDVCA ASTAKTTTSS VNPASSVSAT KRFRTSYQSS QTPRCQVEGC NLDLKSAKDY HRRHRICENH
201: SKSPKVIVAG LERRFCQQCS RFHELTEFDD KKRSCRRRLN DHNARRRRPH PESIQFSSGR LPSSLYDGRQ QINLACNRLP IPVATPMWQN PCSFKDTQTG
301: GSLIRPVKAV GIDKQLHLPT DEMPDAISML HGNSERMLSF DGSTPRVLNQ GLEASAIASN SNVAPDFRRA LSLLSTNSWG LNDPGPTSLD QLMHVNQTSM
401: AQPTMHAEPH NWALASSENM HVQQTPSETR GHSLDLHNNG SSMFQEFQLF KAPYESGCFY PNQIN
Best Arabidopsis Sequence Match ( AT5G43270.2 )
(BLAST)
001: MECNAKPPFQ WELENLISFG TSTAEVPRKL KPMEWEIDGF DCTSLYSSSF AYAGSSGSDI AHAFSKSSKS TSISSSSAEV RTHNFTSETG ESLPGEFAKG
101: IDTSPSLELS FGSGDPVLGL KLGKRTYFED FWEVENAKGL GLPVTLASSS VSPVKKSKSI PQRLQTPHCQ VEGCNLDLSS AKDYHRKHRI CENHSKFPKV
201: VVSGVERRFC QQCSRFHCLS EFDEKKRSCR RRLSDHNARR RKPNPGRTYD GKPQVDFVWN RFALIHPRSE EKFIWPSSKH VPSRVLMPQP AKTEISDTEH
301: NRFGLLDPKT KTARAELFSK EKVTISSHMG ASQDLDGALS LLSNSTTWVS SSDQPRRFTL DHHPSSNLQP VAHRSAAQLN SVSGYWQPDP PAVEGPTALH
401: RNGVGQFNEN YFSLNQFYN
Arabidopsis Description
SPL2Squamosa promoter-binding-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S840]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.