Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G27370.1 | Thale cress | nucleus | 76.08 | 75.51 |
| CDY27611 | Canola | nucleus | 69.97 | 75.34 |
| Bra032822.1-P | Field mustard | nucleus | 69.72 | 75.07 |
| CDX84928 | Canola | nucleus | 68.19 | 73.63 |
| Bra032823.1-P | Field mustard | nucleus | 60.81 | 72.87 |
| CDY27612 | Canola | nucleus | 60.56 | 72.34 |
| CDX84927 | Canola | nucleus | 66.16 | 70.84 |
| Bra010949.1-P | Field mustard | nucleus | 64.89 | 69.67 |
| CDY67700 | Canola | nucleus | 61.32 | 69.65 |
| CDY03914 | Canola | nucleus | 65.65 | 69.35 |
| Bra030041.1-P | Field mustard | nucleus | 65.65 | 68.98 |
| CDY15712 | Canola | nucleus | 65.39 | 68.72 |
| CDY11816 | Canola | nucleus | 63.36 | 68.22 |
| AT2G33810.1 | Thale cress | nucleus | 13.74 | 41.22 |
| Os02t0139400-01 | Rice | nucleus | 29.01 | 40.43 |
| AT5G43270.1 | Thale cress | nucleus | 35.88 | 33.65 |
| KRG97402 | Soybean | nucleus | 36.13 | 32.79 |
| KRH31506 | Soybean | nucleus | 36.39 | 32.28 |
| Os02t0174100-02 | Rice | nucleus | 20.61 | 32.27 |
| AT1G53160.1 | Thale cress | nucleus | 14.25 | 32.18 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 34.61 | 29.69 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 32.32 | 29.0 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 32.82 | 28.41 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 30.03 | 28.37 |
| TraesCS6A01G155300.1 | Wheat | nucleus | 23.66 | 28.35 |
| VIT_11s0065g00170.t01 | Wine grape | nucleus | 33.33 | 28.17 |
| TraesCS6B01G183400.1 | Wheat | nucleus | 23.41 | 28.13 |
| TraesCS6D01G098500.1 | Wheat | nucleus | 33.84 | 28.12 |
| TraesCS6D01G145200.1 | Wheat | nucleus | 23.16 | 28.0 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 24.94 | 28.0 |
| OQU77017 | Sorghum | nucleus | 31.3 | 27.95 |
| TraesCS6B01G138400.1 | Wheat | nucleus | 33.59 | 27.91 |
| TraesCS6A01G110100.2 | Wheat | nucleus | 33.59 | 27.79 |
| EES04495 | Sorghum | nucleus | 33.84 | 27.71 |
| HORVU6Hr1G031450.6 | Barley | nucleus | 22.9 | 27.61 |
| Zm00001d014698_P001 | Maize | nucleus | 30.79 | 27.56 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 30.03 | 27.25 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 23.92 | 27.17 |
| AT3G15270.1 | Thale cress | nucleus | 12.47 | 27.07 |
| Os06t0703500-02 | Rice | nucleus | 32.32 | 26.74 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 31.55 | 26.72 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 31.55 | 26.44 |
| HORVU6Hr1G019700.3 | Barley | nucleus | 33.84 | 26.23 |
| Zm00001d015410_P002 | Maize | nucleus | 22.14 | 26.2 |
| EES04609 | Sorghum | nucleus | 22.39 | 26.11 |
| Zm00001d053775_P001 | Maize | nucleus | 21.88 | 25.98 |
| Os06t0663500-00 | Rice | nucleus | 22.39 | 25.66 |
| GSMUA_Achr10P... | Banana | nucleus | 32.82 | 25.6 |
| Zm00001d015233_P001 | Maize | mitochondrion, nucleus, plastid | 33.84 | 25.05 |
| Zm00001d053890_P003 | Maize | nucleus | 30.53 | 24.9 |
| GSMUA_Achr10P... | Banana | nucleus | 30.53 | 24.64 |
| AT1G02065.1 | Thale cress | nucleus | 19.08 | 22.52 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 29.77 | 22.2 |
| AT2G42200.1 | Thale cress | nucleus | 21.12 | 22.13 |
| AT3G57920.1 | Thale cress | nucleus | 19.59 | 21.75 |
| AT5G50570.2 | Thale cress | nucleus | 19.08 | 20.89 |
| AT5G50670.2 | Thale cress | nucleus | 19.08 | 20.89 |
| AT1G69170.1 | Thale cress | nucleus | 18.83 | 18.27 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | EntrezGene:839625 | UniProt:A0A178WBN1 | ProteinID:AAF99733.1 | ProteinID:AEE30810.1 |
| ProteinID:AEE30811.1 | ProteinID:AEE30812.1 | ProteinID:AEE30813.1 | EMBL:AJ011635 | ArrayExpress:AT1G27360 | EnsemblPlantsGene:AT1G27360 |
| RefSeq:AT1G27360 | TAIR:AT1G27360 | RefSeq:AT1G27360-TAIR-G | EnsemblPlants:AT1G27360.1 | TAIR:AT1G27360.1 | EMBL:AY070106 |
| EMBL:AY088185 | EMBL:AY091286 | ProteinID:CAB56586.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0046872 | GO:GO:0048510 | InterPro:IPR004333 | InterPro:IPR036893 | RefSeq:NP_001077603.1 |
| RefSeq:NP_001077604.1 | RefSeq:NP_564280.1 | RefSeq:NP_973920.1 | ProteinID:OAP14462.1 | PFAM:PF03110 | PO:PO:0000013 |
| PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009049 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF30 | UniProt:Q9FZK0 | InterPro:SBP_dom |
| InterPro:SBP_sf | Symbol:SPL11 | SUPFAM:SSF103612 | UniParc:UPI000009EC77 | SEG:seg | : |
Description
SPL11Squamosa promoter-binding-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZK0]
Coordinates
chr1:+:9500894..9504023
Molecular Weight (calculated)
43866.2 Da
IEP (calculated)
8.136
GRAVY (calculated)
-0.716
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCNMVSSSQ WDWEHLIMSN PSRTEDDSKQ LPTEWEIEKG EGIESIVPHF SGLERVSSGS ATSFWHTAVS KSSQSTSINS SSPEAKRCKL ASESSPGDSC
101: SNIDFVQVKA PTALEVSVAS AESDLCLKLG KRTYSEEYWG RNNNEISAVS MKLLTPSVVA GKSKLCGQSM PVPRCQIDGC ELDLSSAKGY HRKHKVCEKH
201: SKCPKVSVSG LERRFCQQCS RFHAVSEFDE KKRSCRKRLS HHNARRRKPQ GVFSMNPERV YDRRQHTNML WNGVSLNARS EEMYEWGNNT YDTKPRQTEK
301: SFTLSFQRGN GSEDQLVASS SRMFSTSQTS GGFPAGKSKF QLHGEDVGEY SGVLHESQDI HRALSLLSTS SDPLAQPHVQ PFSLLCSYDV VPK
101: SNIDFVQVKA PTALEVSVAS AESDLCLKLG KRTYSEEYWG RNNNEISAVS MKLLTPSVVA GKSKLCGQSM PVPRCQIDGC ELDLSSAKGY HRKHKVCEKH
201: SKCPKVSVSG LERRFCQQCS RFHAVSEFDE KKRSCRKRLS HHNARRRKPQ GVFSMNPERV YDRRQHTNML WNGVSLNARS EEMYEWGNNT YDTKPRQTEK
301: SFTLSFQRGN GSEDQLVASS SRMFSTSQTS GGFPAGKSKF QLHGEDVGEY SGVLHESQDI HRALSLLSTS SDPLAQPHVQ PFSLLCSYDV VPK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.