Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003305.1-P | Field mustard | nucleus | 69.77 | 78.16 |
| CDX98259 | Canola | nucleus | 71.47 | 77.85 |
| CDX67715 | Canola | nucleus | 68.93 | 77.22 |
| CDY47656 | Canola | nucleus | 66.1 | 72.22 |
| CDY61750 | Canola | nucleus | 61.02 | 70.13 |
| Bra014599.1-P | Field mustard | nucleus | 58.76 | 68.87 |
| AT2G42200.1 | Thale cress | nucleus | 57.34 | 54.13 |
| AT2G33810.1 | Thale cress | nucleus | 15.54 | 41.98 |
| VIT_08s0007g06270.t01 | Wine grape | nucleus | 43.79 | 40.9 |
| KRH67040 | Soybean | nucleus | 37.29 | 35.97 |
| KRG95361 | Soybean | nucleus | 36.44 | 35.93 |
| GSMUA_Achr4P03880_001 | Banana | nucleus | 28.81 | 35.79 |
| Solyc10g078700.1.1 | Tomato | nucleus | 37.01 | 35.22 |
| PGSC0003DMT400029751 | Potato | nucleus | 37.01 | 35.22 |
| AT1G53160.1 | Thale cress | nucleus | 16.95 | 34.48 |
| GSMUA_Achr7P20510_001 | Banana | nucleus | 32.2 | 33.43 |
| GSMUA_Achr9P22260_001 | Banana | nucleus | 32.2 | 33.24 |
| KRH38141 | Soybean | nucleus, plastid | 33.62 | 31.9 |
| KRH71914 | Soybean | nucleus, plastid | 31.36 | 31.01 |
| AT3G15270.1 | Thale cress | nucleus | 15.82 | 30.94 |
| GSMUA_Achr8P25550_001 | Banana | nucleus | 29.38 | 30.23 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 29.38 | 30.06 |
| GSMUA_Achr4P01450_001 | Banana | nucleus | 29.66 | 29.41 |
| GSMUA_Achr9P20220_001 | Banana | nucleus | 20.34 | 29.27 |
| GSMUA_Achr6P22280_001 | Banana | nucleus | 32.2 | 27.74 |
| GSMUA_Achr9P27660_001 | Banana | nucleus | 28.53 | 27.37 |
| GSMUA_Achr3P11170_001 | Banana | nucleus | 29.38 | 26.8 |
| Zm00001d006028_P001 | Maize | nucleus | 28.25 | 26.11 |
| Zm00001d020941_P001 | Maize | nucleus | 26.55 | 24.87 |
| TraesCS5B01G265600.2 | Wheat | nucleus | 27.4 | 24.49 |
| TraesCS7B01G144900.1 | Wheat | nucleus | 26.55 | 24.35 |
| EER99092 | Sorghum | nucleus | 26.55 | 24.23 |
| TraesCS7D01G245200.2 | Wheat | nucleus | 26.27 | 24.16 |
| Os09t0491532-01 | Rice | nucleus | 22.03 | 24.15 |
| TraesCS5A01G265900.2 | Wheat | nucleus | 27.68 | 23.84 |
| TraesCS7A01G246500.1 | Wheat | nucleus | 25.99 | 23.83 |
| TraesCS5D01G273900.2 | Wheat | nucleus | 27.4 | 23.77 |
| EES14266 | Sorghum | nucleus | 27.4 | 23.72 |
| Zm00001d031451_P001 | Maize | nucleus | 26.84 | 23.57 |
| Os08t0509600-01 | Rice | nucleus | 27.68 | 23.5 |
| HORVU5Hr1G073440.7 | Barley | nucleus | 27.12 | 23.08 |
| Zm00001d052890_P001 | Maize | nucleus | 24.86 | 21.57 |
| AT5G50670.2 | Thale cress | nucleus | 21.47 | 21.17 |
| AT5G50570.2 | Thale cress | nucleus | 21.47 | 21.17 |
| AT1G02065.1 | Thale cress | nucleus | 19.49 | 20.72 |
| AT5G43270.1 | Thale cress | nucleus | 24.29 | 20.53 |
| AT1G69170.1 | Thale cress | nucleus | 23.45 | 20.49 |
| AT1G27360.1 | Thale cress | nucleus | 21.75 | 19.59 |
| AT1G27370.1 | Thale cress | nucleus | 21.47 | 19.19 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | EntrezGene:824961 | UniProt:A0A178V850 | ProteinID:AEE79717.1 | ArrayExpress:AT3G57920 |
| EnsemblPlantsGene:AT3G57920 | RefSeq:AT3G57920 | TAIR:AT3G57920 | RefSeq:AT3G57920-TAIR-G | EnsemblPlants:AT3G57920.1 | TAIR:AT3G57920.1 |
| EMBL:AY086384 | Unigene:At.34784 | ProteinID:CAB67620.1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008361 | GO:GO:0009058 | GO:GO:0009791 | GO:GO:0009908 |
| GO:GO:0009987 | GO:GO:0010228 | GO:GO:0016043 | GO:GO:0042127 | GO:GO:0046872 | GO:GO:0048653 |
| InterPro:IPR004333 | InterPro:IPR036893 | RefSeq:NP_191351.1 | ProteinID:OAP02470.1 | PFAM:PF03110 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025022 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF62 |
| UniProt:Q9M2Q6 | InterPro:SBP_dom | InterPro:SBP_sf | Symbol:SPL15 | SUPFAM:SSF103612 | UniParc:UPI00000A9F63 |
| SEG:seg | : | : | : | : | : |
Description
SPL15Squamosa promoter-binding-like protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Q6]
Coordinates
chr3:-:21444243..21446035
Molecular Weight (calculated)
39674.6 Da
IEP (calculated)
8.994
GRAVY (calculated)
-0.662
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MELLMCSGQA ESGGSSSTES SSLSGGLRFG QKIYFEDGSG SRSKNRVNTV RKSSTTARCQ VEGCRMDLSN VKAYYSRHKV CCIHSKSSKV IVSGLHQRFC
101: QQCSRFHQLS EFDLEKRSCR RRLACHNERR RKPQPTTALF TSHYSRIAPS LYGNPNAAMI KSVLGDPTAW STARSVMQRP GPWQINPVRE THPHMNVLSH
201: GSSSFTTCPE MINNNSTDSS CALSLLSNSY PIHQQQLQTP TNTWRPSSGF DSMISFSDKV TMAQPPPIST HQPPISTHQQ YLSQTWEVIA GEKSNSHYMS
301: PVSQISEPAD FQISNGTTMG GFELYLHQQV LKQYMEPENT RAYDSSPQHF NWSL
101: QQCSRFHQLS EFDLEKRSCR RRLACHNERR RKPQPTTALF TSHYSRIAPS LYGNPNAAMI KSVLGDPTAW STARSVMQRP GPWQINPVRE THPHMNVLSH
201: GSSSFTTCPE MINNNSTDSS CALSLLSNSY PIHQQQLQTP TNTWRPSSGF DSMISFSDKV TMAQPPPIST HQPPISTHQQ YLSQTWEVIA GEKSNSHYMS
301: PVSQISEPAD FQISNGTTMG GFELYLHQQV LKQYMEPENT RAYDSSPQHF NWSL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.