Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99092 | Sorghum | nucleus | 82.51 | 81.44 |
| Zm00001d020941_P001 | Maize | nucleus | 78.33 | 79.37 |
| Os09t0491532-01 | Rice | nucleus | 56.14 | 66.56 |
| TraesCS7A01G246500.1 | Wheat | nucleus | 58.22 | 57.77 |
| TraesCS7B01G144900.1 | Wheat | nucleus | 57.96 | 57.51 |
| TraesCS7D01G245200.2 | Wheat | nucleus | 56.92 | 56.62 |
| Os08t0509600-01 | Rice | nucleus | 55.87 | 51.32 |
| Zm00001d031451_P001 | Maize | nucleus | 52.48 | 49.88 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 43.34 | 47.98 |
| Zm00001d052890_P001 | Maize | nucleus | 50.39 | 47.3 |
| KRG95361 | Soybean | nucleus | 31.07 | 33.15 |
| KRH67040 | Soybean | nucleus | 31.33 | 32.7 |
| KRH71914 | Soybean | nucleus, plastid | 29.5 | 31.56 |
| CDY06881 | Canola | nucleus | 29.77 | 31.41 |
| Bra016891.1-P | Field mustard | nucleus | 29.77 | 31.41 |
| VIT_08s0007g06270.t01 | Wine grape | nucleus | 30.81 | 31.13 |
| CDY14818 | Canola | nucleus | 29.77 | 31.06 |
| CDX98259 | Canola | nucleus | 25.85 | 30.46 |
| CDX79888 | Canola | nucleus | 29.24 | 30.43 |
| KRH38141 | Soybean | nucleus, plastid | 29.5 | 30.29 |
| CDY53504 | Canola | nucleus | 29.24 | 30.27 |
| CDY61750 | Canola | nucleus | 24.02 | 29.87 |
| AT2G42200.1 | Thale cress | nucleus | 29.24 | 29.87 |
| Bra004674.1-P | Field mustard | nucleus | 28.46 | 29.54 |
| Bra003305.1-P | Field mustard | nucleus | 24.02 | 29.11 |
| CDY47656 | Canola | nucleus | 24.54 | 29.01 |
| PGSC0003DMT400029751 | Potato | nucleus | 27.94 | 28.76 |
| Solyc10g078700.1.1 | Tomato | nucleus | 27.68 | 28.49 |
| CDX67715 | Canola | nucleus | 23.5 | 28.48 |
| AT3G57920.1 | Thale cress | nucleus | 26.11 | 28.25 |
| Bra014599.1-P | Field mustard | nucleus | 21.93 | 27.81 |
| Zm00001d021573_P001 | Maize | mitochondrion | 14.36 | 26.7 |
| Zm00001d053775_P001 | Maize | nucleus | 22.19 | 25.68 |
| Zm00001d006451_P001 | Maize | mitochondrion | 16.45 | 24.8 |
| Zm00001d015410_P002 | Maize | nucleus | 21.41 | 24.7 |
| Zm00001d012015_P001 | Maize | nucleus | 22.72 | 23.2 |
| Zm00001d042319_P001 | Maize | nucleus | 22.72 | 21.27 |
| Zm00001d049824_P002 | Maize | nucleus | 23.76 | 20.92 |
| Zm00001d026175_P001 | Maize | nucleus | 21.67 | 20.8 |
| Zm00001d049822_P001 | Maize | nucleus | 23.24 | 20.6 |
| Zm00001d006091_P001 | Maize | nucleus | 22.72 | 20.57 |
| Zm00001d026491_P001 | Maize | nucleus | 20.37 | 19.7 |
| Zm00001d002005_P001 | Maize | nucleus | 20.37 | 19.55 |
| Zm00001d021056_P001 | Maize | nucleus | 23.24 | 19.14 |
| Zm00001d053890_P003 | Maize | nucleus | 22.98 | 18.26 |
| Zm00001d053756_P001 | Maize | nucleus | 19.06 | 17.98 |
| Zm00001d015451_P001 | Maize | nucleus | 20.63 | 17.91 |
| Zm00001d014698_P001 | Maize | nucleus | 20.37 | 17.77 |
| Zm00001d036692_P001 | Maize | nucleus | 20.1 | 17.74 |
| Zm00001d046906_P001 | Maize | nucleus | 19.32 | 17.45 |
| Zm00001d015233_P001 | Maize | mitochondrion, nucleus, plastid | 21.67 | 15.63 |
Protein Annotations
| EntrezGene:100217104 | MapMan:15.5.18 | Gene3D:4.10.1100.10 | UniProt:B4FLF0 | EMBL:BT037938 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0046872 | InterPro:IPR004333 | InterPro:IPR036893 | EMBL:KJ726823 | ProteinID:ONM22558.1 |
| PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF59 | InterPro:SBP_dom | InterPro:SBP_sf |
| SUPFAM:SSF103612 | UniParc:UPI00017B6ADA | EnsemblPlantsGene:Zm00001d006028 | EnsemblPlants:Zm00001d006028_P001 | EnsemblPlants:Zm00001d006028_T001 | SEG:seg |
Description
SBP-transcription factor 23Squamosa promoter-binding-like protein 15
Coordinates
chr2:-:195579800..195583642
Molecular Weight (calculated)
40201.6 Da
IEP (calculated)
8.375
GRAVY (calculated)
-0.539
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGGGGGSD DFHGLTFGQK IYFEQDAGAA GGSATGGRKG KGAAASASAA QPPRCRVDGC GVDLSAVKQY YCRHKVCYMH SKEPRVFVAG IEQRFCQQCS
101: RFHQLPEFDQ GKRSCRRRLI GHNERRRKPP PGPLTSRYGP LAASLVQEPG RFRSFLLDFS YPRVPSSVRD DAWQWQGMQH GGDRMLLGTA SAIQWHGNQE
201: PHPPHRSAAA GYGNHAYNNC HGGGGLVAAA AGASMLSSAF EPPPGGGGCV AGATAADSSC ALSLLSTQPW DTPTQSGSSH HNRSPAMSAA AGAFEVAPSS
301: VVASSYTASS SWSGSRDPAD GARKNAQRHD DGLHLVHPPG PVHHGHFSGE LELALQGSGP PHVDHGGGTC FSHSDTNAMN WSL
101: RFHQLPEFDQ GKRSCRRRLI GHNERRRKPP PGPLTSRYGP LAASLVQEPG RFRSFLLDFS YPRVPSSVRD DAWQWQGMQH GGDRMLLGTA SAIQWHGNQE
201: PHPPHRSAAA GYGNHAYNNC HGGGGLVAAA AGASMLSSAF EPPPGGGGCV AGATAADSSC ALSLLSTQPW DTPTQSGSSH HNRSPAMSAA AGAFEVAPSS
301: VVASSYTASS SWSGSRDPAD GARKNAQRHD DGLHLVHPPG PVHHGHFSGE LELALQGSGP PHVDHGGGTC FSHSDTNAMN WSL
001: MEMGSNSGPG HGPGQAESGG SSTESSSFSG GLMFGQKIYF EDGGGGSGSS SSGGRSNRRV RGGGSGQSGQ IPRCQVEGCG MDLTNAKGYY SRHRVCGVHS
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
Arabidopsis Description
SPL9Squamosa promoter-binding-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q700W2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.