Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY61750 | Canola | nucleus | 97.35 | 95.45 |
Bra003305.1-P | Field mustard | nucleus | 69.87 | 66.77 |
AT3G57920.1 | Thale cress | nucleus | 68.87 | 58.76 |
Bra016891.1-P | Field mustard | nucleus | 48.34 | 40.22 |
Bra004674.1-P | Field mustard | nucleus | 48.01 | 39.3 |
Bra005470.1-P | Field mustard | nucleus | 16.23 | 34.51 |
VIT_08s0007g06270.t01 | Wine grape | nucleus | 42.38 | 33.77 |
Bra021880.1-P | Field mustard | nucleus | 15.23 | 32.62 |
GSMUA_Achr4P03880_001 | Banana | nucleus | 30.13 | 31.93 |
KRH67040 | Soybean | nucleus | 38.41 | 31.61 |
KRG95361 | Soybean | nucleus | 37.09 | 31.2 |
Solyc10g078700.1.1 | Tomato | nucleus | 37.42 | 30.38 |
PGSC0003DMT400029751 | Potato | nucleus | 37.42 | 30.38 |
Bra032662.1-P | Field mustard | nucleus | 15.56 | 29.75 |
GSMUA_Achr7P20510_001 | Banana | nucleus | 32.45 | 28.74 |
Bra021094.1-P | Field mustard | nucleus | 16.56 | 28.41 |
KRH38141 | Soybean | nucleus, plastid | 34.77 | 28.15 |
KRH71914 | Soybean | nucleus, plastid | 32.78 | 27.65 |
Bra039656.1-P | Field mustard | nucleus | 16.23 | 27.22 |
GSMUA_Achr9P22260_001 | Banana | nucleus | 30.79 | 27.11 |
Bra027265.1-P | Field mustard | nucleus | 15.89 | 26.82 |
Bra038101.1-P | Field mustard | nucleus | 16.23 | 26.78 |
GSMUA_Achr7P02020_001 | Banana | nucleus | 29.47 | 25.72 |
GSMUA_Achr8P25550_001 | Banana | nucleus | 28.48 | 25.0 |
GSMUA_Achr4P01450_001 | Banana | nucleus | 28.15 | 23.81 |
GSMUA_Achr6P22280_001 | Banana | nucleus | 31.79 | 23.36 |
GSMUA_Achr9P20220_001 | Banana | nucleus | 18.87 | 23.17 |
GSMUA_Achr3P11170_001 | Banana | nucleus | 29.14 | 22.68 |
Bra004363.1-P | Field mustard | nucleus | 22.52 | 22.59 |
GSMUA_Achr9P27660_001 | Banana | nucleus | 26.82 | 21.95 |
Zm00001d006028_P001 | Maize | nucleus | 27.81 | 21.93 |
Zm00001d020941_P001 | Maize | nucleus | 26.82 | 21.43 |
Bra038324.1-P | Field mustard | nucleus | 22.85 | 21.17 |
TraesCS5B01G265600.2 | Wheat | nucleus | 27.15 | 20.71 |
TraesCS7B01G144900.1 | Wheat | nucleus | 26.16 | 20.47 |
EER99092 | Sorghum | nucleus | 26.16 | 20.36 |
TraesCS5D01G273900.2 | Wheat | nucleus | 27.48 | 20.34 |
TraesCS7D01G245200.2 | Wheat | nucleus | 25.83 | 20.26 |
TraesCS5A01G265900.2 | Wheat | nucleus | 27.48 | 20.19 |
TraesCS7A01G246500.1 | Wheat | nucleus | 25.5 | 19.95 |
Zm00001d031451_P001 | Maize | nucleus | 26.49 | 19.85 |
HORVU5Hr1G073440.7 | Barley | nucleus | 27.15 | 19.71 |
Os08t0509600-01 | Rice | nucleus | 27.15 | 19.66 |
Bra022766.1-P | Field mustard | nucleus | 22.19 | 19.59 |
EES14266 | Sorghum | nucleus | 26.49 | 19.56 |
Bra033671.1-P | Field mustard | nucleus | 22.85 | 19.06 |
Bra027478.1-P | Field mustard | nucleus | 24.17 | 18.72 |
Os09t0491532-01 | Rice | nucleus | 19.87 | 18.58 |
Zm00001d052890_P001 | Maize | nucleus | 24.83 | 18.38 |
Bra032823.1-P | Field mustard | nucleus | 19.54 | 17.99 |
Bra033221.1-P | Field mustard | nucleus | 19.21 | 17.68 |
Bra032822.1-P | Field mustard | nucleus | 20.53 | 16.99 |
Bra010949.1-P | Field mustard | nucleus | 20.53 | 16.94 |
Bra030040.1-P | Field mustard | nucleus | 20.86 | 16.15 |
Bra030041.1-P | Field mustard | nucleus | 19.54 | 15.78 |
Protein Annotations
MapMan:15.5.18 | Gene3D:4.10.1100.10 | EnsemblPlantsGene:Bra014599 | EnsemblPlants:Bra014599.1 | EnsemblPlants:Bra014599.1-P | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005634 | GO:GO:0046872 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:M4DDN1 | PFAM:PF03110 |
PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF62 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
UniParc:UPI00025443A5 | SEG:seg | : | : | : | : |
Description
AT3G57920 (E=3e-050) SPL15 | SPL15 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 15); DNA binding / transcription factor
Coordinates
chrA04:+:1674031..1675273
Molecular Weight (calculated)
33682.5 Da
IEP (calculated)
9.552
GRAVY (calculated)
-0.689
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MELLMGSGQN RTETVGSSSR ESSSLSGGLR IGQKIYFEDG SGSGKDRANK YRKTTTGARC QVEGCKMDLS NAKTYYSRHK VCGIHSKSSK VTVSGLHQRF
101: HQLCEFDLEK RSCRRRLACH NERRRKPQAT RATLFTSGLS RISPSLYGSV LGDPSWDRSV FSQGSSRFSI TYPEMVKNSS TDSSCVLSLL SNSNTTQQQQ
201: QQLQTSTNAY LMDAERVTIM AKSPPVSVHN QYSNQTWEFM SGEKSNSPCV SSPALRLSQI SEPDDDLQFL MSNGATMGGF ELNLQQQVLR QYSSTQHFTW
301: PL
101: HQLCEFDLEK RSCRRRLACH NERRRKPQAT RATLFTSGLS RISPSLYGSV LGDPSWDRSV FSQGSSRFSI TYPEMVKNSS TDSSCVLSLL SNSNTTQQQQ
201: QQLQTSTNAY LMDAERVTIM AKSPPVSVHN QYSNQTWEFM SGEKSNSPCV SSPALRLSQI SEPDDDLQFL MSNGATMGGF ELNLQQQVLR QYSSTQHFTW
301: PL
001: MELLMCSGQA ESGGSSSTES SSLSGGLRFG QKIYFEDGSG SRSKNRVNTV RKSSTTARCQ VEGCRMDLSN VKAYYSRHKV CCIHSKSSKV IVSGLHQRFC
101: QQCSRFHQLS EFDLEKRSCR RRLACHNERR RKPQPTTALF TSHYSRIAPS LYGNPNAAMI KSVLGDPTAW STARSVMQRP GPWQINPVRE THPHMNVLSH
201: GSSSFTTCPE MINNNSTDSS CALSLLSNSY PIHQQQLQTP TNTWRPSSGF DSMISFSDKV TMAQPPPIST HQPPISTHQQ YLSQTWEVIA GEKSNSHYMS
301: PVSQISEPAD FQISNGTTMG GFELYLHQQV LKQYMEPENT RAYDSSPQHF NWSL
101: QQCSRFHQLS EFDLEKRSCR RRLACHNERR RKPQPTTALF TSHYSRIAPS LYGNPNAAMI KSVLGDPTAW STARSVMQRP GPWQINPVRE THPHMNVLSH
201: GSSSFTTCPE MINNNSTDSS CALSLLSNSY PIHQQQLQTP TNTWRPSSGF DSMISFSDKV TMAQPPPIST HQPPISTHQQ YLSQTWEVIA GEKSNSHYMS
301: PVSQISEPAD FQISNGTTMG GFELYLHQQV LKQYMEPENT RAYDSSPQHF NWSL
Arabidopsis Description
SPL15Squamosa promoter-binding-like protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Q6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.