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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY61750 Canola nucleus 97.35 95.45
Bra003305.1-P Field mustard nucleus 69.87 66.77
AT3G57920.1 Thale cress nucleus 68.87 58.76
Bra016891.1-P Field mustard nucleus 48.34 40.22
Bra004674.1-P Field mustard nucleus 48.01 39.3
Bra005470.1-P Field mustard nucleus 16.23 34.51
VIT_08s0007g06270.t01 Wine grape nucleus 42.38 33.77
Bra021880.1-P Field mustard nucleus 15.23 32.62
GSMUA_Achr4P03880_001 Banana nucleus 30.13 31.93
KRH67040 Soybean nucleus 38.41 31.61
KRG95361 Soybean nucleus 37.09 31.2
Solyc10g078700.1.1 Tomato nucleus 37.42 30.38
PGSC0003DMT400029751 Potato nucleus 37.42 30.38
Bra032662.1-P Field mustard nucleus 15.56 29.75
GSMUA_Achr7P20510_001 Banana nucleus 32.45 28.74
Bra021094.1-P Field mustard nucleus 16.56 28.41
KRH38141 Soybean nucleus, plastid 34.77 28.15
KRH71914 Soybean nucleus, plastid 32.78 27.65
Bra039656.1-P Field mustard nucleus 16.23 27.22
GSMUA_Achr9P22260_001 Banana nucleus 30.79 27.11
Bra027265.1-P Field mustard nucleus 15.89 26.82
Bra038101.1-P Field mustard nucleus 16.23 26.78
GSMUA_Achr7P02020_001 Banana nucleus 29.47 25.72
GSMUA_Achr8P25550_001 Banana nucleus 28.48 25.0
GSMUA_Achr4P01450_001 Banana nucleus 28.15 23.81
GSMUA_Achr6P22280_001 Banana nucleus 31.79 23.36
GSMUA_Achr9P20220_001 Banana nucleus 18.87 23.17
GSMUA_Achr3P11170_001 Banana nucleus 29.14 22.68
Bra004363.1-P Field mustard nucleus 22.52 22.59
GSMUA_Achr9P27660_001 Banana nucleus 26.82 21.95
Zm00001d006028_P001 Maize nucleus 27.81 21.93
Zm00001d020941_P001 Maize nucleus 26.82 21.43
Bra038324.1-P Field mustard nucleus 22.85 21.17
TraesCS5B01G265600.2 Wheat nucleus 27.15 20.71
TraesCS7B01G144900.1 Wheat nucleus 26.16 20.47
EER99092 Sorghum nucleus 26.16 20.36
TraesCS5D01G273900.2 Wheat nucleus 27.48 20.34
TraesCS7D01G245200.2 Wheat nucleus 25.83 20.26
TraesCS5A01G265900.2 Wheat nucleus 27.48 20.19
TraesCS7A01G246500.1 Wheat nucleus 25.5 19.95
Zm00001d031451_P001 Maize nucleus 26.49 19.85
HORVU5Hr1G073440.7 Barley nucleus 27.15 19.71
Os08t0509600-01 Rice nucleus 27.15 19.66
Bra022766.1-P Field mustard nucleus 22.19 19.59
EES14266 Sorghum nucleus 26.49 19.56
Bra033671.1-P Field mustard nucleus 22.85 19.06
Bra027478.1-P Field mustard nucleus 24.17 18.72
Os09t0491532-01 Rice nucleus 19.87 18.58
Zm00001d052890_P001 Maize nucleus 24.83 18.38
Bra032823.1-P Field mustard nucleus 19.54 17.99
Bra033221.1-P Field mustard nucleus 19.21 17.68
Bra032822.1-P Field mustard nucleus 20.53 16.99
Bra010949.1-P Field mustard nucleus 20.53 16.94
Bra030040.1-P Field mustard nucleus 20.86 16.15
Bra030041.1-P Field mustard nucleus 19.54 15.78
Protein Annotations
MapMan:15.5.18Gene3D:4.10.1100.10EnsemblPlantsGene:Bra014599EnsemblPlants:Bra014599.1EnsemblPlants:Bra014599.1-PGO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0046872InterPro:IPR004333InterPro:IPR036893UniProt:M4DDN1PFAM:PF03110
PFscan:PS51141PANTHER:PTHR31251PANTHER:PTHR31251:SF62InterPro:SBP_domInterPro:SBP_sfSUPFAM:SSF103612
UniParc:UPI00025443A5SEG:seg::::
Description
AT3G57920 (E=3e-050) SPL15 | SPL15 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 15); DNA binding / transcription factor
Coordinates
chrA04:+:1674031..1675273
Molecular Weight (calculated)
33682.5 Da
IEP (calculated)
9.552
GRAVY (calculated)
-0.689
Length
302 amino acids
Sequence
(BLAST)
001: MELLMGSGQN RTETVGSSSR ESSSLSGGLR IGQKIYFEDG SGSGKDRANK YRKTTTGARC QVEGCKMDLS NAKTYYSRHK VCGIHSKSSK VTVSGLHQRF
101: HQLCEFDLEK RSCRRRLACH NERRRKPQAT RATLFTSGLS RISPSLYGSV LGDPSWDRSV FSQGSSRFSI TYPEMVKNSS TDSSCVLSLL SNSNTTQQQQ
201: QQLQTSTNAY LMDAERVTIM AKSPPVSVHN QYSNQTWEFM SGEKSNSPCV SSPALRLSQI SEPDDDLQFL MSNGATMGGF ELNLQQQVLR QYSSTQHFTW
301: PL
Best Arabidopsis Sequence Match ( AT3G57920.1 )
(BLAST)
001: MELLMCSGQA ESGGSSSTES SSLSGGLRFG QKIYFEDGSG SRSKNRVNTV RKSSTTARCQ VEGCRMDLSN VKAYYSRHKV CCIHSKSSKV IVSGLHQRFC
101: QQCSRFHQLS EFDLEKRSCR RRLACHNERR RKPQPTTALF TSHYSRIAPS LYGNPNAAMI KSVLGDPTAW STARSVMQRP GPWQINPVRE THPHMNVLSH
201: GSSSFTTCPE MINNNSTDSS CALSLLSNSY PIHQQQLQTP TNTWRPSSGF DSMISFSDKV TMAQPPPIST HQPPISTHQQ YLSQTWEVIA GEKSNSHYMS
301: PVSQISEPAD FQISNGTTMG GFELYLHQQV LKQYMEPENT RAYDSSPQHF NWSL
Arabidopsis Description
SPL15Squamosa promoter-binding-like protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Q6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.