Factsheet for Bra038101.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25876	Canola	nucleus	95.08	98.86
CDY50515	Canola	nucleus	78.69	91.72
Bra039656.1-P	Field mustard	nucleus	83.06	84.44
AT1G53160.1	Thale cress	nucleus	72.68	76.44
Bra027265.1-P	Field mustard	nucleus	67.76	69.27
Bra021094.1-P	Field mustard	nucleus	63.39	65.91
VIT_10s0003g00050.t01	Wine grape	nucleus	43.17	56.43
Bra005470.1-P	Field mustard	nucleus	43.17	55.63
Solyc10g009080.2.1	Tomato	nucleus	40.98	55.56
PGSC0003DMT400058753	Potato	nucleus	39.89	54.07
PGSC0003DMT400076399	Potato	nucleus	39.34	52.94
Solyc02g077920.2.1	Tomato	nucleus	38.8	52.21
Bra021880.1-P	Field mustard	nucleus	37.16	48.23
KRH20415	Soybean	nucleus	36.07	46.48
KRH21401	Soybean	nucleus	34.43	45.65
KRH10909	Soybean	nucleus	34.43	45.65
KRH50085	Soybean	nucleus	36.07	45.21
Bra032662.1-P	Field mustard	nucleus	30.6	35.44
Os07t0505200-01	Rice	nucleus	37.7	31.94
EER97257	Sorghum	nucleus	35.52	30.23
Zm00001d021573_P001	Maize	mitochondrion	30.05	26.7
Zm00001d006451_P001	Maize	mitochondrion	36.61	26.38
KXG36284	Sorghum	nucleus	31.15	26.15
Bra004363.1-P	Field mustard	nucleus	30.6	18.6
Bra033221.1-P	Field mustard	nucleus	31.15	17.38
Bra038324.1-P	Field mustard	nucleus	30.6	17.18
Bra016891.1-P	Field mustard	nucleus	32.79	16.53
Bra003305.1-P	Field mustard	nucleus	28.42	16.46
Bra004674.1-P	Field mustard	nucleus	32.79	16.26
Bra014599.1-P	Field mustard	nucleus	26.78	16.23
Bra022766.1-P	Field mustard	nucleus	29.51	15.79
Bra033671.1-P	Field mustard	nucleus	30.05	15.19
Bra032823.1-P	Field mustard	nucleus	26.23	14.63
Bra030040.1-P	Field mustard	nucleus	29.51	13.85
Bra010949.1-P	Field mustard	nucleus	27.32	13.66
Bra030041.1-P	Field mustard	nucleus	27.87	13.64
Bra027478.1-P	Field mustard	nucleus	28.96	13.59
Bra032822.1-P	Field mustard	nucleus	26.78	13.42

Protein Annotations

MapMan:15.5.18	Gene3D:4.10.1100.10	EnsemblPlantsGene:Bra038101	EnsemblPlants:Bra038101.1	EnsemblPlants:Bra038101.1-P	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987
GO:GO:0046872	InterPro:IPR004333	InterPro:IPR036893	UniProt:M4FAI7	PFAM:PF03110	PIRSF:PIRSF037575
PFscan:PS51141	PANTHER:PTHR31251	PANTHER:PTHR31251:SF64	InterPro:SBP_dom	InterPro:SBP_fam	InterPro:SBP_sf
SUPFAM:SSF103612	UniParc:UPI00025477F3	SEG:seg	:	:	:

Description

AT3G15270 (E=1e-052) SPL5 | SPL5 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 5); DNA binding / transcription factor

Coordinates

chrA05:-:10522710..10523331

Molecular Weight (calculated)

21061.8 Da

IEP (calculated)

10.131

GRAVY (calculated)

-1.258

Length

183 amino acids

Sequence
(BLAST)

001: MEGKKAQGLG YLKKKAPMST YHADEELEND TDGEEEVERE EEKRKGVMDR FKGSSSNRVS SRLCQVDRCT TDLKEAKQYH RRHKVCEVHA KASSVYLAGV
101: KQRFCQQCSR FHELPEFDEA KRSCRRRLAG HNERRRKSSG ESFGEGAGGR RGVTSQGMQK QERSRVEMTL PMSNSSFKRP QIR

Best Arabidopsis Sequence Match ( AT3G15270.1 )
(BLAST)

001: MEGQRTQRRG YLKDKATVSN LVEEEMENGM DGEEEDGGDE DKRKKVMERV RGPSTDRVPS RLCQVDRCTV NLTEAKQYYR RHRVCEVHAK ASAATVAGVR
101: QRFCQQCSRF HELPEFDEAK RSCRRRLAGH NERRRKISGD SFGEGSGRRG FSGQLIQTQE RNRVDRKLPM TNSSFKRPQI R

Arabidopsis Description

SPL5SPL5 [Source:UniProtKB/TrEMBL;Acc:A0A178VL13]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.