Factsheet for Bra033671.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027478.1-P	Field mustard	nucleus	80.11	74.36
AT5G43270.1	Thale cress	nucleus	82.6	71.36
CDY22356	Canola	nucleus	100.0	69.75
Os02t0139400-01	Rice	nucleus	33.15	42.55
Bra005470.1-P	Field mustard	nucleus	15.75	40.14
Bra021880.1-P	Field mustard	nucleus	14.64	37.59
VIT_01s0010g03710.t01	Wine grape	nucleus	49.45	37.53
PGSC0003DMT400084734	Potato	nucleus	44.2	34.41
Solyc05g015510.2.1	Tomato	nucleus	43.37	33.91
Bra032662.1-P	Field mustard	nucleus	14.64	33.54
Bra032823.1-P	Field mustard	nucleus	30.39	33.54
Bra030040.1-P	Field mustard	nucleus	35.91	33.33
Bra032822.1-P	Field mustard	nucleus	33.43	33.15
Bra030041.1-P	Field mustard	nucleus	33.7	32.62
GSMUA_Achr9P14160_001	Banana	nucleus	40.88	32.31
Bra010949.1-P	Field mustard	nucleus	32.6	32.24
GSMUA_Achr4P05720_001	Banana	nucleus	30.39	31.79
GSMUA_Achr5P21990_001	Banana	nucleus	37.85	31.64
GSMUA_Achr9P23140_001	Banana	nucleus	36.19	31.49
GSMUA_Achr4P12470_001	Banana	nucleus	30.11	31.14
GSMUA_Achr3P27750_001	Banana	nucleus	39.5	30.49
Os02t0174100-02	Rice	nucleus	20.99	30.28
Bra038101.1-P	Field mustard	nucleus	15.19	30.05
GSMUA_Achr3P05360_001	Banana	nucleus	38.4	29.96
PGSC0003DMT400068752	Potato	nucleus	31.77	29.87
TraesCS6D01G145200.1	Wheat	nucleus	26.8	29.85
TraesCS6A01G155300.1	Wheat	nucleus	26.8	29.57
TraesCS6B01G183400.1	Wheat	nucleus	26.52	29.36
HORVU6Hr1G031450.6	Barley	nucleus	26.24	29.14
Bra021094.1-P	Field mustard	nucleus	14.09	28.98
TraesCS6D01G098500.1	Wheat	nucleus	37.85	28.96
Zm00001d015410_P002	Maize	nucleus	26.52	28.92
TraesCS6B01G138400.1	Wheat	nucleus	37.57	28.75
Zm00001d053775_P001	Maize	nucleus	26.24	28.7
GSMUA_Achr5P22630_001	Banana	nucleus	35.91	28.63
Bra027265.1-P	Field mustard	nucleus	14.09	28.49
Zm00001d014698_P001	Maize	nucleus	34.53	28.47
TraesCS6A01G110100.2	Wheat	nucleus	37.29	28.42
Bra039656.1-P	Field mustard	nucleus	14.09	28.33
GSMUA_Achr6P36010_001	Banana	nucleus	34.25	28.31
Solyc04g045560.2.1	Tomato	nucleus	27.35	28.29
EES04609	Sorghum	nucleus	26.24	28.19
OQU77017	Sorghum	nucleus	34.25	28.18
GSMUA_Achr10P...	Banana	nucleus	39.23	28.17
Os06t0703500-02	Rice	nucleus	36.74	28.0
GSMUA_Achr10P...	Banana	nucleus	37.57	27.93
EES04495	Sorghum	nucleus	35.91	27.08
HORVU6Hr1G019700.3	Barley	nucleus	37.29	26.63
GSMUA_Achr8P23820_001	Banana	nucleus	36.74	25.24
Zm00001d053890_P003	Maize	nucleus	33.15	24.9
Bra003305.1-P	Field mustard	nucleus	21.55	24.68
Bra004363.1-P	Field mustard	nucleus	20.44	24.58
Os06t0663500-00	Rice	nucleus	22.93	24.2
Bra038324.1-P	Field mustard	nucleus	21.55	23.93
Zm00001d015233_P001	Maize	mitochondrion, nucleus, plastid	34.81	23.73
Bra004674.1-P	Field mustard	nucleus	23.48	23.04
Bra014599.1-P	Field mustard	nucleus	19.06	22.85
Bra016891.1-P	Field mustard	nucleus	22.65	22.59
Bra033221.1-P	Field mustard	nucleus	19.61	21.65
Bra022766.1-P	Field mustard	nucleus	20.17	21.34

Protein Annotations

MapMan:15.5.18	Gene3D:4.10.1100.10	EnsemblPlantsGene:Bra033671	EnsemblPlants:Bra033671.1	EnsemblPlants:Bra033671.1-P	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0007275	GO:GO:0008150	GO:GO:0009791	GO:GO:0009908
GO:GO:0043565	GO:GO:0044212	GO:GO:0046872	GO:GO:0048510	GO:GO:0048653	InterPro:IPR004333
InterPro:IPR036893	UniProt:M4EXY2	PFAM:PF03110	PFscan:PS51141	PANTHER:PTHR31251	PANTHER:PTHR31251:SF30
InterPro:SBP_dom	InterPro:SBP_sf	SUPFAM:SSF103612	UniParc:UPI000253F79E	SEG:seg	:

Description

AT5G43270 (E=4e-110) SPL2 | SPL2 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2); DNA binding / transcription factor

Coordinates

chrA06:+:25709037..25710612

Molecular Weight (calculated)

39758.8 Da

IEP (calculated)

7.282

GRAVY (calculated)

-0.659

Length

362 amino acids

Sequence
(BLAST)

001: MECNAKPSLQ WEWDNLISFG TSSAEIPKKQ RPMDWENDGF DCTTFYSSSF ATEAAYGGGS SGSDLAHAFS KSSKSTSISS SSAEVRTYNF TSEAGESVPP
101: GELGSSEEFA MGIDASPSLE LSFGSGDPVL GLKLGKRTYF EDFWEVENAK GSALPVSLAS SSASPVKKSK TLSQKLQTPH CQVEGCNLDL SSAKDYHRKH
201: RICENHSKFP KVVVSGVERR FCQQCSRFHC LSEFDEKKRS CRRRLSDHNA RRRKPNPGRT YDLLEKVTIS SSHMGASQDL DGALSLLSNS TPWVSSNQPT
301: RFSLNHHSTS NLQPVVHGSV TQLSSVSSYW QPDPPAAEGS TALTRNGVGQ FNENYNLNQF YN

Best Arabidopsis Sequence Match ( AT5G43270.2 )
(BLAST)

001: MECNAKPPFQ WELENLISFG TSTAEVPRKL KPMEWEIDGF DCTSLYSSSF AYAGSSGSDI AHAFSKSSKS TSISSSSAEV RTHNFTSETG ESLPGEFAKG
101: IDTSPSLELS FGSGDPVLGL KLGKRTYFED FWEVENAKGL GLPVTLASSS VSPVKKSKSI PQRLQTPHCQ VEGCNLDLSS AKDYHRKHRI CENHSKFPKV
201: VVSGVERRFC QQCSRFHCLS EFDEKKRSCR RRLSDHNARR RKPNPGRTYD GKPQVDFVWN RFALIHPRSE EKFIWPSSKH VPSRVLMPQP AKTEISDTEH
301: NRFGLLDPKT KTARAELFSK EKVTISSHMG ASQDLDGALS LLSNSTTWVS SSDQPRRFTL DHHPSSNLQP VAHRSAAQLN SVSGYWQPDP PAVEGPTALH
401: RNGVGQFNEN YFSLNQFYN

Arabidopsis Description

SPL2Squamosa promoter-binding-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S840]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.