Factsheet for Bra033221.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032662.1-P	Field mustard	nucleus	38.11	79.11
CDY38043	Canola	nucleus	76.22	74.63
AT1G02065.1	Thale cress	nucleus	74.39	73.27
VIT_15s0021g02300.t01	Wine grape	nucleus	49.09	52.96
PGSC0003DMT400074976	Potato	nucleus	45.73	51.19
Solyc10g018780.1.1	Tomato	nucleus	45.12	50.51
Solyc01g090730.2.1	Tomato	nucleus	45.12	49.5
KRH66611	Soybean	nucleus	50.61	49.4
KRH48747	Soybean	nucleus	49.09	47.63
PGSC0003DMT400066955	Potato	nucleus	43.6	47.35
KRH75288	Soybean	nucleus	38.11	43.55
Bra005470.1-P	Field mustard	nucleus	17.99	41.55
KRH07602	Soybean	nucleus	27.13	41.2
Bra021880.1-P	Field mustard	nucleus	17.07	39.72
Bra021094.1-P	Field mustard	nucleus	17.68	32.95
Bra039656.1-P	Field mustard	nucleus	17.99	32.78
Bra027265.1-P	Field mustard	nucleus	17.68	32.4
GSMUA_Achr4P24610_001	Banana	nucleus	32.01	32.01
GSMUA_Achr2P11940_001	Banana	nucleus	30.49	31.45
Bra038101.1-P	Field mustard	nucleus	17.38	31.15
TraesCS7D01G482300.1	Wheat	nucleus	27.74	28.71
TraesCS7D01G482400.1	Wheat	nucleus	28.96	24.48
TraesCS6B01G180300.1	Wheat	nucleus	32.32	23.98
Bra004363.1-P	Field mustard	nucleus	21.95	23.92
TraesCS6D01G142100.1	Wheat	nucleus	32.93	23.89
EES11579	Sorghum	nucleus	28.96	23.75
Zm00001d026491_P001	Maize	nucleus	28.66	23.74
TraesCS6A01G152000.1	Wheat	nucleus	32.32	23.66
TraesCS7B01G402300.1	Wheat	nucleus	28.05	23.59
TraesCS2D01G502900.2	Wheat	nucleus	29.27	23.59
Zm00001d002005_P001	Maize	nucleus	28.66	23.56
TraesCS2B01G530400.1	Wheat	nucleus	29.27	23.53
TraesCS7B01G402400.1	Wheat	nucleus	28.66	23.44
TraesCS7A01G495000.1	Wheat	nucleus	28.96	23.4
TraesCS7D01G482500.1	Wheat	nucleus	29.57	23.32
TraesCS2A01G502300.1	Wheat	nucleus	29.27	23.3
Zm00001d053756_P001	Maize	nucleus	28.66	23.15
Zm00001d015451_P001	Maize	nucleus	31.1	23.13
Os04t0656500-01	Rice	nucleus	29.27	23.08
TraesCS7B01G402200.1	Wheat	nucleus	29.27	23.02
TraesCS7A01G495100.1	Wheat	nucleus	29.27	22.91
TraesCS7A01G494900.1	Wheat	nucleus	27.44	22.84
Zm00001d046906_P001	Maize	nucleus	29.27	22.64
EER88765	Sorghum	nucleus	30.49	22.52
Zm00001d036692_P001	Maize	nucleus	29.57	22.35
TraesCS7A01G494800.1	Wheat	nucleus	26.83	22.06
OQU84482	Sorghum	nucleus	29.88	22.02
Os06t0659100-00	Rice	nucleus	28.35	21.83
TraesCS7D01G482200.1	Wheat	nucleus	27.13	21.81
HORVU6Hr1G030490.2	Barley	nucleus, plastid	32.62	21.79
Os02t0177300-00	Rice	nucleus	30.79	21.58
Bra032823.1-P	Field mustard	nucleus	21.34	21.34
Bra038324.1-P	Field mustard	nucleus	21.04	21.17
Bra032822.1-P	Field mustard	nucleus	22.56	20.27
Bra022766.1-P	Field mustard	nucleus	20.73	19.88
HORVU7Hr1G110980.3	Barley	nucleus, plastid	27.13	19.82
Bra033671.1-P	Field mustard	nucleus	21.65	19.61
Bra010949.1-P	Field mustard	nucleus	21.65	19.4
Bra014599.1-P	Field mustard	nucleus	17.68	19.21
Bra003305.1-P	Field mustard	nucleus	18.29	18.99
Bra016891.1-P	Field mustard	nucleus	20.73	18.73
Bra027478.1-P	Field mustard	nucleus	22.26	18.72
Bra004674.1-P	Field mustard	nucleus	21.04	18.7
Bra030040.1-P	Field mustard	nucleus	21.95	18.46
Bra030041.1-P	Field mustard	nucleus	21.04	18.45
HORVU2Hr1G111620.1	Barley	cytosol, nucleus	1.83	9.38

Protein Annotations

MapMan:15.5.18	Gene3D:4.10.1100.10	EnsemblPlantsGene:Bra033221	EnsemblPlants:Bra033221.1	EnsemblPlants:Bra033221.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0046872	InterPro:IPR004333	InterPro:IPR036893	UniProt:M4EWN7	PFAM:PF03110
PFscan:PS51141	PANTHER:PTHR31251	PANTHER:PTHR31251:SF4	InterPro:SBP_dom	InterPro:SBP_sf	SUPFAM:SSF103612
UniParc:UPI0002543729	SEG:seg	:	:	:	:

Description

AT1G02065 (E=1e-115) SPL8 | SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8); DNA binding

Coordinates

chrA10:-:4830421..4832038

Molecular Weight (calculated)

36560.9 Da

IEP (calculated)

8.639

GRAVY (calculated)

-0.814

Length

328 amino acids

Sequence
(BLAST)

001: MLDYEWDNPS VIILSGEDRS HHHQQEPDPT RVLSIFDPTQ THHSQSSYSN TCPPLFPSLS NQQHLTVYGH QTSNQFHPSF VYDPRITNHP YSPSSDSIYG
101: HPHHSALFSF DQTGSGGSGS SYNFLIPKTE VDVSRPLDFT SNRIGLNLGG RTYFSAADDD FVSRLYRRSR PGELGVGNTL STPRCQAEGC NADLSHAKHY
201: HRRHKVCEFH SKASTVVAAG LSQRFCQQCS RFHLLSEFDN GKRSCRKRLA DHNRRRRKCH QSISKPTPDT TTTPQSPNDS GVKSSSSPSN ALPTISLECF
301: RQKQFQTTTT PSSSTSASSS NSMFFSSG

Best Arabidopsis Sequence Match ( AT1G02065.1 )
(BLAST)

001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG

Arabidopsis Description

SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.