Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G111620.1 | Barley | cytosol, nucleus | 15.53 | 100.0 |
| TraesCS2B01G530400.1 | Wheat | nucleus | 95.63 | 96.57 |
| TraesCS2D01G502900.2 | Wheat | nucleus | 95.39 | 96.56 |
| Os04t0656500-01 | Rice | nucleus | 74.51 | 73.8 |
| EES11579 | Sorghum | nucleus | 71.36 | 73.5 |
| Zm00001d026491_P001 | Maize | nucleus | 68.93 | 71.72 |
| Bra032662.1-P | Field mustard | nucleus | 17.48 | 45.57 |
| GSMUA_Achr10P... | Banana | nucleus | 20.87 | 37.72 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 21.36 | 34.51 |
| TraesCS2A01G232400.1 | Wheat | nucleus | 15.78 | 33.85 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 21.36 | 32.12 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 20.63 | 31.25 |
| VIT_15s0021g02300.t01 | Wine grape | nucleus | 22.57 | 30.59 |
| CDX90071 | Canola | nucleus | 22.82 | 30.13 |
| KRH75288 | Soybean | nucleus | 20.87 | 29.97 |
| Bra033221.1-P | Field mustard | nucleus | 23.3 | 29.27 |
| Solyc01g090730.2.1 | Tomato | nucleus | 20.87 | 28.76 |
| PGSC0003DMT400074976 | Potato | nucleus | 20.39 | 28.67 |
| Solyc10g018780.1.1 | Tomato | nucleus | 20.39 | 28.67 |
| CDY38043 | Canola | nucleus | 23.3 | 28.66 |
| KRH66611 | Soybean | nucleus | 23.06 | 28.27 |
| AT1G02065.1 | Thale cress | nucleus | 22.82 | 28.23 |
| PGSC0003DMT400066955 | Potato | nucleus | 20.63 | 28.15 |
| KRH48747 | Soybean | nucleus | 23.06 | 28.11 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 24.03 | 27.97 |
| CDY15132 | Canola | nucleus | 15.78 | 27.9 |
| TraesCS7A01G495100.1 | Wheat | nucleus | 27.67 | 27.21 |
| TraesCS7A01G494900.1 | Wheat | nucleus | 25.73 | 26.9 |
| TraesCS7A01G495000.1 | Wheat | nucleus | 26.46 | 26.85 |
| TraesCS7A01G494800.1 | Wheat | nucleus | 25.73 | 26.57 |
| KRH07602 | Soybean | nucleus | 13.11 | 25.0 |
| TraesCS6A01G155300.1 | Wheat | nucleus | 18.93 | 23.78 |
| TraesCS7A01G246500.1 | Wheat | nucleus | 22.09 | 23.58 |
| TraesCS2A01G413900.1 | Wheat | nucleus | 19.42 | 22.92 |
| TraesCS6A01G152000.1 | Wheat | nucleus | 24.27 | 22.32 |
| TraesCS5A01G265900.2 | Wheat | nucleus | 21.36 | 21.41 |
| TraesCS7A01G260500.1 | Wheat | nucleus | 20.87 | 21.13 |
| TraesCS5A01G286700.2 | Wheat | nucleus | 22.09 | 20.87 |
| TraesCS3A01G432500.1 | Wheat | nucleus | 20.15 | 20.0 |
| TraesCS6A01G110100.2 | Wheat | nucleus | 21.12 | 18.32 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G502300.1 | EnsemblPlantsGene:TraesCS2A01G502300 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR004333 |
| InterPro:IPR036893 | InterPro:SBP_dom | InterPro:SBP_sf | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF17 | PFAM:PF03110 |
| PFscan:PS51141 | SEG:seg | SUPFAM:SSF103612 | MapMan:15.5.18 | : | : |
Description
No Description!
Coordinates
chr2A:-:730613752..730617415
Molecular Weight (calculated)
44491.5 Da
IEP (calculated)
7.682
GRAVY (calculated)
-0.779
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNLPPAAVN SCDEFGYGAP NPPPPSLFPI MDHQEGGGGI HREHDHHHHH HLGGYSLEPS SLALLPPSSH ATIAAHSPHD ILQFYHHPTS HHYLAAAAAG
101: GNGSPYGQFG GGGTAGGFQS YYHQQAGTGA PEYYFPTLVS SAEENMASFA ATQLGLNLGY RTYFPPRGGY TYGHHPPRCQ AEGCKADLSG AKRYHRRHKV
201: CEHHSKAPVV VTAGGLHQRF CQQCSRFHLL DEFDDAKKSC RKRLADHNRR RRKSKPSEGD AADKRRAQAS KAASAKGKAA GSSSKSTGTG DAMDIQVQLG
301: SGDLSKDQDE TMGHGEAVKE MQVDPKGKAS MMQQQQQQQG HHGHGLHLQS QHGFPFPSSS AGSCFPQSQA VSSTDNTSNI GHVQQEQPAL GFHQHSNILQ
401: LGQAMFDLDF DH
101: GNGSPYGQFG GGGTAGGFQS YYHQQAGTGA PEYYFPTLVS SAEENMASFA ATQLGLNLGY RTYFPPRGGY TYGHHPPRCQ AEGCKADLSG AKRYHRRHKV
201: CEHHSKAPVV VTAGGLHQRF CQQCSRFHLL DEFDDAKKSC RKRLADHNRR RRKSKPSEGD AADKRRAQAS KAASAKGKAA GSSSKSTGTG DAMDIQVQLG
301: SGDLSKDQDE TMGHGEAVKE MQVDPKGKAS MMQQQQQQQG HHGHGLHLQS QHGFPFPSSS AGSCFPQSQA VSSTDNTSNI GHVQQEQPAL GFHQHSNILQ
401: LGQAMFDLDF DH
001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
Arabidopsis Description
SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.