Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH48747 | Soybean | nucleus | 85.65 | 54.73 |
| KRH66611 | Soybean | nucleus | 81.94 | 52.68 |
| KRH75288 | Soybean | nucleus | 49.07 | 36.93 |
| CDY15132 | Canola | nucleus | 37.5 | 34.76 |
| VIT_15s0021g02300.t01 | Wine grape | nucleus | 46.76 | 33.22 |
| PGSC0003DMT400074976 | Potato | nucleus | 42.59 | 31.4 |
| Solyc10g018780.1.1 | Tomato | nucleus | 42.13 | 31.06 |
| KRH20415 | Soybean | nucleus | 18.52 | 28.17 |
| PGSC0003DMT400066955 | Potato | nucleus | 38.89 | 27.81 |
| Solyc01g090730.2.1 | Tomato | nucleus | 38.43 | 27.76 |
| KRH21401 | Soybean | nucleus | 17.59 | 27.54 |
| CDY38043 | Canola | nucleus | 42.13 | 27.16 |
| Bra033221.1-P | Field mustard | nucleus | 41.2 | 27.13 |
| AT1G02065.1 | Thale cress | nucleus | 40.28 | 26.13 |
| CDX90071 | Canola | nucleus | 37.5 | 25.96 |
| KRH10909 | Soybean | nucleus | 16.2 | 25.36 |
| KRH50085 | Soybean | nucleus | 17.13 | 25.34 |
| Bra032662.1-P | Field mustard | nucleus | 17.59 | 24.05 |
| KRH27270 | Soybean | nucleus | 18.06 | 20.86 |
| KRH22053 | Soybean | nucleus | 18.06 | 20.86 |
| KRG88838 | Soybean | nucleus | 17.59 | 20.0 |
| KRH55227 | Soybean | nucleus | 16.67 | 19.46 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 28.24 | 18.6 |
| KRH28893 | Soybean | nucleus | 12.5 | 18.49 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 26.85 | 18.24 |
| TraesCS7D01G482300.1 | Wheat | nucleus | 23.61 | 16.09 |
| KRG88952 | Soybean | nucleus | 15.74 | 15.18 |
| TraesCS6B01G180300.1 | Wheat | nucleus | 31.02 | 15.16 |
| TraesCS6D01G142100.1 | Wheat | nucleus | 31.02 | 14.82 |
| KRH22367 | Soybean | nucleus | 10.65 | 14.56 |
| TraesCS6A01G152000.1 | Wheat | nucleus | 30.09 | 14.51 |
| TraesCS7B01G402300.1 | Wheat | nucleus | 25.46 | 14.1 |
| TraesCS7A01G494900.1 | Wheat | nucleus | 25.46 | 13.96 |
| TraesCS7D01G482400.1 | Wheat | nucleus | 25.0 | 13.92 |
| Zm00001d015451_P001 | Maize | nucleus | 28.24 | 13.83 |
| Zm00001d053756_P001 | Maize | nucleus | 25.93 | 13.79 |
| OQU84482 | Sorghum | nucleus | 28.24 | 13.71 |
| TraesCS7A01G495100.1 | Wheat | nucleus | 26.39 | 13.6 |
| TraesCS7D01G482200.1 | Wheat | nucleus | 25.46 | 13.48 |
| TraesCS7B01G402400.1 | Wheat | nucleus | 25.0 | 13.47 |
| Zm00001d046906_P001 | Maize | nucleus | 26.39 | 13.44 |
| TraesCS7B01G402200.1 | Wheat | nucleus | 25.93 | 13.43 |
| Zm00001d002005_P001 | Maize | nucleus | 24.54 | 13.28 |
| TraesCS2D01G502900.2 | Wheat | nucleus | 25.0 | 13.27 |
| Os02t0177300-00 | Rice | nucleus | 28.7 | 13.25 |
| TraesCS2B01G530400.1 | Wheat | nucleus | 25.0 | 13.24 |
| TraesCS7D01G482500.1 | Wheat | nucleus | 25.46 | 13.22 |
| TraesCS2A01G502300.1 | Wheat | nucleus | 25.0 | 13.11 |
| TraesCS7A01G495000.1 | Wheat | nucleus | 24.54 | 13.05 |
| TraesCS7A01G494800.1 | Wheat | nucleus | 24.07 | 13.03 |
| EES11579 | Sorghum | nucleus | 24.07 | 13.0 |
| Os06t0659100-00 | Rice | nucleus | 25.46 | 12.91 |
| HORVU6Hr1G030490.2 | Barley | nucleus, plastid | 29.17 | 12.83 |
| Zm00001d026491_P001 | Maize | nucleus | 23.15 | 12.63 |
| EER88765 | Sorghum | nucleus | 25.93 | 12.61 |
| Zm00001d036692_P001 | Maize | nucleus | 25.0 | 12.44 |
| Os04t0656500-01 | Rice | nucleus | 23.61 | 12.26 |
| HORVU7Hr1G110980.3 | Barley | nucleus, plastid | 25.0 | 12.03 |
| KRH67040 | Soybean | nucleus | 19.44 | 11.44 |
| KRG95361 | Soybean | nucleus | 18.98 | 11.42 |
| KRH66613 | Soybean | nucleus | 17.59 | 11.11 |
| KRH48746 | Soybean | nucleus | 17.59 | 11.11 |
| KRH75287 | Soybean | nucleus | 17.59 | 11.05 |
| HORVU2Hr1G111620.1 | Barley | cytosol, nucleus | 3.24 | 10.94 |
| KRH38141 | Soybean | nucleus, plastid | 18.52 | 10.72 |
| KRH71914 | Soybean | nucleus, plastid | 17.59 | 10.61 |
| KRH63786 | Soybean | nucleus | 17.13 | 9.97 |
| KRH54164 | Soybean | nucleus | 18.98 | 9.9 |
| KRH54739 | Soybean | nucleus | 16.2 | 9.21 |
| KRH06918 | Soybean | nucleus | 15.28 | 9.04 |
| KRG94562 | Soybean | nucleus | 15.28 | 9.04 |
| KRG97402 | Soybean | nucleus | 18.06 | 9.01 |
| KRH59812 | Soybean | nucleus | 16.2 | 8.97 |
| KRH31506 | Soybean | nucleus | 18.06 | 8.8 |
| KRH70968 | Soybean | nucleus | 19.44 | 8.71 |
| KRH75117 | Soybean | nucleus | 19.44 | 8.7 |
| KRH41121 | Soybean | nucleus | 15.74 | 8.59 |
| KRH56776 | Soybean | nucleus | 21.3 | 8.38 |
| KRH03167 | Soybean | nucleus | 20.37 | 8.09 |
| KRH63174 | Soybean | nucleus | 18.98 | 7.27 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | UniProt:A0A0R0FW55 | EMBL:ACUP02010059 | EnsemblPlantsGene:GLYMA_16G097400 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0046872 | InterPro:IPR004333 | InterPro:IPR036893 | EnsemblPlants:KRH07602 | ProteinID:KRH07602 |
| ProteinID:KRH07602.1 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF4 | InterPro:SBP_dom |
| InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI0006EE14AA | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr16:+:18919558..18920242
Molecular Weight (calculated)
24510.5 Da
IEP (calculated)
7.598
GRAVY (calculated)
-0.674
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTRNEDSSA TASDQTHRQI FDHYASNTFI PNHFLHAPMH STATTVATTT VDFTHSHFNP QPHHHNQMNH HQHHHAFFDP RAFHDASNTS YPHPLPCFHL
101: THCLTNGPEP YRLLLVPKSE EVGWPMDFVG SRIGLNMGGR TYFSSSEDDF VSRLYRRSRP VEPGSTILSN SPRCQAEGCN ADLSQAKHYH HRHKVCEFHS
201: KAATVIAAGL TQRLCQ
101: THCLTNGPEP YRLLLVPKSE EVGWPMDFVG SRIGLNMGGR TYFSSSEDDF VSRLYRRSRP VEPGSTILSN SPRCQAEGCN ADLSQAKHYH HRHKVCEFHS
201: KAATVIAAGL TQRLCQ
001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFVPPKV ATFDLF
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFVPPKV ATFDLF
Arabidopsis Description
SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.