Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH54164 | Soybean | nucleus | 92.18 | 82.61 |
| KRH41121 | Soybean | nucleus | 65.77 | 61.62 |
| KRH59812 | Soybean | nucleus | 64.69 | 61.54 |
| VIT_17s0000g01260.t01 | Wine grape | nucleus | 53.91 | 49.88 |
| PGSC0003DMT400056374 | Potato | nucleus | 36.39 | 42.32 |
| Solyc05g015840.2.1 | Tomato | nucleus | 35.58 | 42.31 |
| AT5G50670.2 | Thale cress | nucleus | 40.43 | 41.78 |
| AT5G50570.2 | Thale cress | nucleus | 40.43 | 41.78 |
| KRH21401 | Soybean | nucleus | 15.09 | 40.58 |
| CDY45826 | Canola | nucleus | 37.2 | 40.47 |
| CDX84872 | Canola | nucleus | 36.93 | 40.18 |
| Bra022766.1-P | Field mustard | nucleus | 36.93 | 40.06 |
| KRH10909 | Soybean | nucleus | 14.82 | 39.86 |
| CDX71667 | Canola | nucleus | 38.54 | 39.83 |
| CDY34028 | Canola | nucleus | 36.66 | 39.08 |
| KRH20415 | Soybean | nucleus | 14.56 | 38.03 |
| KRH50085 | Soybean | nucleus | 14.02 | 35.62 |
| KRH28893 | Soybean | nucleus | 12.67 | 32.19 |
| KRG94562 | Soybean | nucleus | 31.0 | 31.51 |
| KRH06918 | Soybean | nucleus | 31.0 | 31.51 |
| KRH55227 | Soybean | nucleus | 15.63 | 31.35 |
| KRG88952 | Soybean | nucleus | 18.87 | 31.25 |
| KRH27270 | Soybean | nucleus | 15.63 | 31.02 |
| KRH22053 | Soybean | nucleus | 15.36 | 30.48 |
| KRH22367 | Soybean | nucleus | 12.94 | 30.38 |
| KRG88838 | Soybean | nucleus | 15.09 | 29.47 |
| KRH71914 | Soybean | nucleus, plastid | 23.45 | 24.3 |
| KRG95361 | Soybean | nucleus | 23.18 | 23.96 |
| KRH38141 | Soybean | nucleus, plastid | 23.45 | 23.32 |
| KRH54739 | Soybean | nucleus | 23.72 | 23.16 |
| KRH67040 | Soybean | nucleus | 22.64 | 22.89 |
| KRH66611 | Soybean | nucleus | 20.22 | 22.32 |
| KRH48747 | Soybean | nucleus | 20.22 | 22.19 |
| KRH75288 | Soybean | nucleus | 16.98 | 21.95 |
| KRH75287 | Soybean | nucleus | 19.41 | 20.93 |
| KRH66613 | Soybean | nucleus | 18.6 | 20.18 |
| KRH48746 | Soybean | nucleus | 18.33 | 19.88 |
| KRG97402 | Soybean | nucleus | 22.64 | 19.4 |
| KRH31506 | Soybean | nucleus | 22.91 | 19.19 |
| KRH70968 | Soybean | nucleus | 23.45 | 18.05 |
| KRH75117 | Soybean | nucleus | 23.45 | 18.01 |
| KRH63174 | Soybean | nucleus | 26.68 | 17.55 |
| KRH03167 | Soybean | nucleus | 25.61 | 17.46 |
| KRH07602 | Soybean | nucleus | 9.97 | 17.13 |
| KRH56776 | Soybean | nucleus | 25.34 | 17.12 |
Protein Annotations
| EntrezGene:100787407 | MapMan:15.5.18 | Gene3D:4.10.1100.10 | EMBL:ACUP02002711 | EnsemblPlantsGene:GLYMA_04G197100 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0046872 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:K7KL73 | EnsemblPlants:KRH63786 |
| ProteinID:KRH63786 | ProteinID:KRH63786.1 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF20 |
| InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI000294C73A | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr4:-:46877265..46882186
Molecular Weight (calculated)
40730.5 Da
IEP (calculated)
8.689
GRAVY (calculated)
-0.692
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEQNRFGVY RMKGEFSVDL KLGHHVGNSG TESALANKSK DAAAAGVSKM ASSPSGSSKR ARAINSTSLT VACLVDGCNS DLSNCRDYHR RHKVCELHSK
101: TPEVTIGGFK QRFCQQCSRF HSLEQFDERK RSCRKRLDGH NRRRRKPQPE PLSRPGSFLS NYQGTQLLPF SSPHVYPSTA IVSPAWSASL VTSSADARLH
201: NHNQQQHHHH QQDLFLGSSH KEGKQVAFLH NNHPSTAAAL SSQTPPPFPS SSVRHTLLRT DPLSETCGGA RSKMFCESLT TTTTNNNSVH DTTPCALSLL
301: SSSQTHTPGN GLNQMVQPPP SMSLMQPLGL SLQDNNSLES VDHCSSMYSL ASDHGSQCNE AAPQLFPFQW E
101: TPEVTIGGFK QRFCQQCSRF HSLEQFDERK RSCRKRLDGH NRRRRKPQPE PLSRPGSFLS NYQGTQLLPF SSPHVYPSTA IVSPAWSASL VTSSADARLH
201: NHNQQQHHHH QQDLFLGSSH KEGKQVAFLH NNHPSTAAAL SSQTPPPFPS SSVRHTLLRT DPLSETCGGA RSKMFCESLT TTTTNNNSVH DTTPCALSLL
301: SSSQTHTPGN GLNQMVQPPP SMSLMQPLGL SLQDNNSLES VDHCSSMYSL ASDHGSQCNE AAPQLFPFQW E
001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
Arabidopsis Description
SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.