Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG88838 | Soybean | nucleus | 89.19 | 86.84 |
| KRH22053 | Soybean | nucleus | 63.24 | 62.57 |
| KRH27270 | Soybean | nucleus | 62.7 | 62.03 |
| GSMUA_Achr1P08440_001 | Banana | nucleus | 55.14 | 54.55 |
| VIT_19s0014g02350.t01 | Wine grape | nucleus | 56.76 | 51.47 |
| KRH50085 | Soybean | nucleus | 37.84 | 47.95 |
| KRH21401 | Soybean | nucleus | 35.68 | 47.83 |
| KRH10909 | Soybean | nucleus | 35.14 | 47.1 |
| KRH20415 | Soybean | nucleus | 35.68 | 46.48 |
| TraesCS2B01G250900.1 | Wheat | nucleus | 48.11 | 46.35 |
| TraesCS2D01G232800.1 | Wheat | nucleus | 47.57 | 45.83 |
| TraesCS2A01G232400.1 | Wheat | nucleus | 47.57 | 45.83 |
| GSMUA_Achr4P23650_001 | Banana | nucleus | 45.95 | 45.45 |
| GSMUA_Achr2P03070_001 | Banana | nucleus | 51.89 | 44.65 |
| KRH28893 | Soybean | nucleus | 35.14 | 44.52 |
| KRH22367 | Soybean | nucleus | 36.22 | 42.41 |
| HORVU2Hr1G048280.2 | Barley | plastid | 40.54 | 38.46 |
| EER97257 | Sorghum | nucleus | 42.7 | 36.74 |
| Os07t0505200-01 | Rice | nucleus | 42.7 | 36.57 |
| KRG88952 | Soybean | nucleus | 37.84 | 31.25 |
| Zm00001d006451_P001 | Maize | mitochondrion | 41.62 | 30.32 |
| Zm00001d021573_P001 | Maize | mitochondrion | 30.81 | 27.67 |
| KXG36284 | Sorghum | nucleus | 30.81 | 26.15 |
| KRH75288 | Soybean | nucleus | 34.05 | 21.95 |
| KRH75287 | Soybean | nucleus | 38.92 | 20.93 |
| KRH48746 | Soybean | nucleus | 37.3 | 20.18 |
| KRH66613 | Soybean | nucleus | 37.3 | 20.18 |
| KRG95361 | Soybean | nucleus | 37.84 | 19.5 |
| KRH66611 | Soybean | nucleus | 34.59 | 19.05 |
| KRH48747 | Soybean | nucleus | 34.59 | 18.93 |
| KRH67040 | Soybean | nucleus | 37.3 | 18.8 |
| KRH38141 | Soybean | nucleus, plastid | 35.14 | 17.43 |
| KRG94562 | Soybean | nucleus | 32.97 | 16.71 |
| KRH07602 | Soybean | nucleus | 19.46 | 16.67 |
| KRH71914 | Soybean | nucleus, plastid | 31.89 | 16.48 |
| KRH06918 | Soybean | nucleus | 31.89 | 16.16 |
| KRH59812 | Soybean | nucleus | 33.51 | 15.9 |
| KRH41121 | Soybean | nucleus | 33.51 | 15.66 |
| KRH63786 | Soybean | nucleus | 31.35 | 15.63 |
| KRH54739 | Soybean | nucleus | 31.89 | 15.53 |
| KRH54164 | Soybean | nucleus | 33.51 | 14.98 |
| KRG97402 | Soybean | nucleus | 33.51 | 14.32 |
| KRH31506 | Soybean | nucleus | 32.97 | 13.77 |
| KRH70968 | Soybean | nucleus | 34.59 | 13.28 |
| KRH75117 | Soybean | nucleus | 34.05 | 13.04 |
| KRH03167 | Soybean | nucleus | 32.97 | 11.21 |
| KRH56776 | Soybean | nucleus | 32.97 | 11.11 |
| KRH63174 | Soybean | nucleus | 33.51 | 10.99 |
Protein Annotations
| EntrezGene:100800646 | MapMan:15.5.18 | Gene3D:4.10.1100.10 | EMBL:ACUP02003927 | EnsemblPlantsGene:GLYMA_06G238100 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0046872 | UniProt:I1KDS8 | InterPro:IPR004333 | InterPro:IPR036893 | EnsemblPlants:KRH55227 |
| ProteinID:KRH55227 | ProteinID:KRH55227.1 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF64 |
| InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI000233A42D | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr6:+:38902646..38904277
Molecular Weight (calculated)
20886.2 Da
IEP (calculated)
8.919
GRAVY (calculated)
-1.208
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MERERALFER VRKNSTVEEE VENEVEEEDE SGVSITEEEK KKGVGSSGGR RGSSGGSGGV SPPSCQAERC GADLTDAKRY HRRHKVCEFH SKAPVVVVAG
101: LRQRFCQQCS RFHDLAEFDE SKRSCRRRLA GHNERRRKSN PEASNEGSTK GHHPKETTHC RLANERERIQ MNLPGSSGYK SFNIR
101: LRQRFCQQCS RFHDLAEFDE SKRSCRRRLA GHNERRRKSN PEASNEGSTK GHHPKETTHC RLANERERIQ MNLPGSSGYK SFNIR
001: MEGKRSQGQG YMKKKSYLVE EDMETDTDEE EEVGRDRVRG SRGSINRGGS LRLCQVDRCT ADMKEAKLYH RRHKVCEVHA KASSVFLSGL NQRFCQQCSR
101: FHDLQEFDEA KRSCRRRLAG HNERRRKSSG ESTYGEGSGR RGINGQVVMQ NQERSRVEMT LPMPNSSFKR PQIR
101: FHDLQEFDEA KRSCRRRLAG HNERRRKSSG ESTYGEGSGR RGINGQVVMQ NQERSRVEMT LPMPNSSFKR PQIR
Arabidopsis Description
SPL4Squamosa promoter-binding-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7A9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.