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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G250900.1 Wheat nucleus 57.44 58.33
TraesCS2A01G232400.1 Wheat nucleus 56.41 57.29
TraesCS2D01G232800.1 Wheat nucleus 55.9 56.77
GSMUA_Achr1P08440_001 Banana nucleus 45.13 47.06
Os07t0505200-01 Rice nucleus 50.26 45.37
EER97257 Sorghum nucleus 49.23 44.65
GSMUA_Achr4P23650_001 Banana nucleus 42.56 44.38
Solyc07g053810.2.1 Tomato nucleus 33.33 44.22
KRH27270 Soybean nucleus 40.0 41.71
KRH22053 Soybean nucleus 39.49 41.18
KRH55227 Soybean nucleus 38.46 40.54
GSMUA_Achr2P03070_001 Banana nucleus 44.1 40.0
KRG88838 Soybean nucleus 38.97 40.0
PGSC0003DMT400082789 Potato nucleus 33.33 39.39
VIT_19s0014g02350.t01 Wine grape nucleus 40.0 38.24
Zm00001d006451_P001 Maize mitochondrion 49.74 38.19
HORVU2Hr1G097610.1 Barley nucleus 30.26 29.06
HORVU2Hr1G097580.1 Barley nucleus 30.26 28.23
Zm00001d021573_P001 Maize mitochondrion 29.23 27.67
KXG36284 Sorghum nucleus 29.74 26.61
HORVU6Hr1G031450.6 Barley nucleus 27.18 16.26
HORVU5Hr1G076380.9 Barley endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 31.79 15.82
HORVU0Hr1G039170.6 Barley nucleus 29.74 14.5
HORVU3Hr1G094730.2 Barley nucleus 31.28 14.22
HORVU5Hr1G073440.7 Barley nucleus 28.72 13.46
HORVU7Hr1G110980.3 Barley nucleus, plastid 29.23 12.69
HORVU6Hr1G030490.2 Barley nucleus, plastid 29.74 11.81
HORVU6Hr1G019700.3 Barley nucleus 28.21 10.85
HORVU2Hr1G111620.1 Barley cytosol, nucleus 0.0 0.0
Protein Annotations
MapMan:15.5.18Gene3D:4.10.1100.10UniProt:A0A287HYE0ncoils:CoilGO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0046872EnsemblPlantsGene:HORVU2Hr1G048280EnsemblPlants:HORVU2Hr1G048280.2InterPro:IPR004333InterPro:IPR036893PFAM:PF03110
PFscan:PS51141PANTHER:PTHR31251PANTHER:PTHR31251:SF60InterPro:SBP_domInterPro:SBP_sfSUPFAM:SSF103612
UniParc:UPI000B46DF15SEG:seg::::
Description
No Description!
Coordinates
chrchr2H:-:269392292..269400012
Molecular Weight (calculated)
18948.2 Da
IEP (calculated)
11.479
GRAVY (calculated)
-0.884
Length
195 amino acids
Sequence
(BLAST)
001: PSASSPSPST HQLAPQFHFC DSSPRRALAS FVFIAPHRKA WTARTSLASP PQQRPWQRSP RQLXXXXXXX XXXXXXXXXX XXXXXXXXXX XERCGADLTE
101: AKRYHRRHKV CEAHSKAAVV VVAGLRQRFC QQCSRFHELL EFDDQKRSCR RRLAGHNERR RKSSAEXNGG DGCRHADQDG RSHPGNPPLN HFQIR
Best Arabidopsis Sequence Match ( AT1G53160.3 )
(BLAST)
001: MEGKRSQGQG YMKKKSYLVE EDMETDTDEE EEVGRDRVRG SRGSINRGGS LRLCQVDRCT ADMKEAKLYH RRHKVCEVHA KASSVFLSGL NQRFCQQCSR
101: FHDLQEFDEA KRSCRRRLAG HNERRRKSSG ESTYGEGSGR RGINGQVVMQ NQERSRIRVR SVTYPKAQGN Y
Arabidopsis Description
SPL4Squamosa promoter-binding-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7A9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.