Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 1
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2B01G250900.1 | Wheat | nucleus | 57.44 | 58.33 |
TraesCS2A01G232400.1 | Wheat | nucleus | 56.41 | 57.29 |
TraesCS2D01G232800.1 | Wheat | nucleus | 55.9 | 56.77 |
GSMUA_Achr1P08440_001 | Banana | nucleus | 45.13 | 47.06 |
Os07t0505200-01 | Rice | nucleus | 50.26 | 45.37 |
EER97257 | Sorghum | nucleus | 49.23 | 44.65 |
GSMUA_Achr4P23650_001 | Banana | nucleus | 42.56 | 44.38 |
Solyc07g053810.2.1 | Tomato | nucleus | 33.33 | 44.22 |
KRH27270 | Soybean | nucleus | 40.0 | 41.71 |
KRH22053 | Soybean | nucleus | 39.49 | 41.18 |
KRH55227 | Soybean | nucleus | 38.46 | 40.54 |
GSMUA_Achr2P03070_001 | Banana | nucleus | 44.1 | 40.0 |
KRG88838 | Soybean | nucleus | 38.97 | 40.0 |
PGSC0003DMT400082789 | Potato | nucleus | 33.33 | 39.39 |
VIT_19s0014g02350.t01 | Wine grape | nucleus | 40.0 | 38.24 |
Zm00001d006451_P001 | Maize | mitochondrion | 49.74 | 38.19 |
HORVU2Hr1G097610.1 | Barley | nucleus | 30.26 | 29.06 |
HORVU2Hr1G097580.1 | Barley | nucleus | 30.26 | 28.23 |
Zm00001d021573_P001 | Maize | mitochondrion | 29.23 | 27.67 |
KXG36284 | Sorghum | nucleus | 29.74 | 26.61 |
HORVU6Hr1G031450.6 | Barley | nucleus | 27.18 | 16.26 |
HORVU5Hr1G076380.9 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 31.79 | 15.82 |
HORVU0Hr1G039170.6 | Barley | nucleus | 29.74 | 14.5 |
HORVU3Hr1G094730.2 | Barley | nucleus | 31.28 | 14.22 |
HORVU5Hr1G073440.7 | Barley | nucleus | 28.72 | 13.46 |
HORVU7Hr1G110980.3 | Barley | nucleus, plastid | 29.23 | 12.69 |
HORVU6Hr1G030490.2 | Barley | nucleus, plastid | 29.74 | 11.81 |
HORVU6Hr1G019700.3 | Barley | nucleus | 28.21 | 10.85 |
HORVU2Hr1G111620.1 | Barley | cytosol, nucleus | 0.0 | 0.0 |
Protein Annotations
MapMan:15.5.18 | Gene3D:4.10.1100.10 | UniProt:A0A287HYE0 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
GO:GO:0046872 | EnsemblPlantsGene:HORVU2Hr1G048280 | EnsemblPlants:HORVU2Hr1G048280.2 | InterPro:IPR004333 | InterPro:IPR036893 | PFAM:PF03110 |
PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF60 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
UniParc:UPI000B46DF15 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:269392292..269400012
Molecular Weight (calculated)
18948.2 Da
IEP (calculated)
11.479
GRAVY (calculated)
-0.884
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: PSASSPSPST HQLAPQFHFC DSSPRRALAS FVFIAPHRKA WTARTSLASP PQQRPWQRSP RQLXXXXXXX XXXXXXXXXX XXXXXXXXXX XERCGADLTE
101: AKRYHRRHKV CEAHSKAAVV VVAGLRQRFC QQCSRFHELL EFDDQKRSCR RRLAGHNERR RKSSAEXNGG DGCRHADQDG RSHPGNPPLN HFQIR
101: AKRYHRRHKV CEAHSKAAVV VVAGLRQRFC QQCSRFHELL EFDDQKRSCR RRLAGHNERR RKSSAEXNGG DGCRHADQDG RSHPGNPPLN HFQIR
001: MEGKRSQGQG YMKKKSYLVE EDMETDTDEE EEVGRDRVRG SRGSINRGGS LRLCQVDRCT ADMKEAKLYH RRHKVCEVHA KASSVFLSGL NQRFCQQCSR
101: FHDLQEFDEA KRSCRRRLAG HNERRRKSSG ESTYGEGSGR RGINGQVVMQ NQERSRIRVR SVTYPKAQGN Y
101: FHDLQEFDEA KRSCRRRLAG HNERRRKSSG ESTYGEGSGR RGINGQVVMQ NQERSRIRVR SVTYPKAQGN Y
Arabidopsis Description
SPL4Squamosa promoter-binding-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7A9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.