Factsheet for HORVU7Hr1G110980.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G482300.1	Wheat	nucleus	60.58	85.8
TraesCS7A01G494900.1	Wheat	nucleus	74.16	84.52
TraesCS7B01G402400.1	Wheat	nucleus	71.27	79.8
TraesCS7D01G482200.1	Wheat	nucleus	66.59	73.28
TraesCS7A01G494800.1	Wheat	nucleus	64.59	72.68
Os06t0659100-00	Rice	nucleus	57.24	60.33
EER88765	Sorghum	nucleus	58.35	59.01
Zm00001d046906_P001	Maize	nucleus	55.46	58.73
Zm00001d036692_P001	Maize	nucleus	55.23	57.14
HORVU6Hr1G030490.2	Barley	nucleus, plastid	45.21	41.34
Bra032662.1-P	Field mustard	nucleus	14.03	39.87
GSMUA_Achr4P20590_001	Banana	nucleus	21.6	35.66
GSMUA_Achr3P00810_001	Banana	nucleus	19.82	34.9
GSMUA_Achr7P05010_001	Banana	nucleus	21.16	34.67
GSMUA_Achr10P...	Banana	nucleus	17.37	34.21
HORVU2Hr1G097610.1	Barley	nucleus	15.14	33.5
HORVU2Hr1G097580.1	Barley	nucleus	15.14	32.54
KRH75288	Soybean	nucleus	18.93	29.62
VIT_15s0021g02300.t01	Wine grape	nucleus	20.04	29.61
PGSC0003DMT400074976	Potato	nucleus	19.15	29.35
HORVU2Hr1G048280.2	Barley	plastid	12.69	29.23
PGSC0003DMT400066955	Potato	nucleus	19.6	29.14
Solyc10g018780.1.1	Tomato	nucleus	18.93	29.01
GSMUA_Achr7P08750_001	Banana	nucleus	22.72	28.81
Solyc01g090730.2.1	Tomato	nucleus	18.93	28.43
KRH66611	Soybean	nucleus	21.16	28.27
KRH48747	Soybean	nucleus	21.16	28.11
CDX90071	Canola	nucleus	19.15	27.56
Bra033221.1-P	Field mustard	nucleus	19.82	27.13
CDY38043	Canola	nucleus	19.82	26.57
AT1G02065.1	Thale cress	nucleus	19.6	26.43
KRH07602	Soybean	nucleus	12.03	25.0
CDY15132	Canola	nucleus	12.92	24.89
HORVU5Hr1G073440.7	Barley	nucleus	19.38	20.91
HORVU6Hr1G031450.6	Barley	nucleus	15.14	20.86
HORVU0Hr1G039170.6	Barley	nucleus	18.26	20.5
HORVU3Hr1G094730.2	Barley	nucleus	18.49	19.35
HORVU5Hr1G076380.9	Barley	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	14.48	16.58
HORVU6Hr1G019700.3	Barley	nucleus	17.37	15.38
HORVU2Hr1G111620.1	Barley	cytosol, nucleus	1.34	9.38

Protein Annotations

MapMan:15.5.18	Gene3D:4.10.1100.10	UniProt:A0A287XT74	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0046872
EnsemblPlantsGene:HORVU7Hr1G110980	EnsemblPlants:HORVU7Hr1G110980.3	InterPro:IPR004333	InterPro:IPR036893	PFAM:PF03110	PFscan:PS51141
PANTHER:PTHR31251	PANTHER:PTHR31251:SF34	InterPro:SBP_dom	InterPro:SBP_sf	SUPFAM:SSF103612	UniParc:UPI000B477F19
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:631947284..631949772

Molecular Weight (calculated)

47991.9 Da

IEP (calculated)

8.908

GRAVY (calculated)

-0.511

Length

449 amino acids

Sequence
(BLAST)

001: TLTLSPWPAG SLFNHLCALH HLTQHSTTTL IHHPASSSQP HAPSPSPSSL GPAMMSGGRM NGPASDDFPF GAMQPPPYVG FEHAGGGGGQ RHQGAMMYDN
101: FDFAVAAAAF GQFQDAPHHQ MLAMPPNGSG AGGLVPMAPP PMPMPGMQLQ MPPMPHGMHG HGDVCPSMGM VKREGGAGDA GRIGLNLGRR TYFSPGDMMA
201: VDRVLMRSRL GGVFGLGFGR AHQQAPRCQV EDCKADLSGA KHYHRRHKVC EYHAKAALVS TAGKQQRFCQ QCSRSHVLME FDEAKRSCRR RLAEHNRRRR
301: KPAAGSTATS SKDSAPPSKK PNAGAICSSY TGDNSSLSAT KSTISSNTSA ISCLQLQGQA RAAAAARPTA LTLGAPPEKD DQQQQFRNAM QLHHHQEHQH
401: FITSLLHGNI NNSNILSCSS VSSNTMPSAV AANGEDDNNN MHMFEVDFM

Best Arabidopsis Sequence Match ( AT1G02065.1 )
(BLAST)

001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG

Arabidopsis Description

SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.