Factsheet for HORVU2Hr1G097580.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G097610.1	Barley	nucleus	94.26	97.04
TraesCS2A01G413900.1	Wheat	nucleus	86.12	51.58
TraesCS2D01G410700.1	Wheat	nucleus	86.12	50.7
TraesCS2B01G432700.1	Wheat	nucleus	85.17	50.42
Os04t0551500-01	Rice	nucleus	56.94	33.06
EES11232	Sorghum	nucleus	65.55	32.78
KRG88952	Soybean	nucleus	34.45	32.14
Zm00001d026175_P001	Maize	nucleus	60.77	31.83
HORVU2Hr1G048280.2	Barley	plastid	28.23	30.26
GSMUA_Achr4P26940_001	Banana	nucleus	45.93	27.67
GSMUA_Achr5P13440_001	Banana	mitochondrion, nucleus	35.41	25.43
KRH75287	Soybean	nucleus	39.23	23.84
KRH66613	Soybean	nucleus	35.41	21.64
VIT_15s0021g02290.t01	Wine grape	nucleus	39.71	20.8
KRH48746	Soybean	nucleus	33.97	20.76
HORVU6Hr1G031450.6	Barley	nucleus	31.1	19.94
HORVU0Hr1G039170.6	Barley	nucleus	33.97	17.75
HORVU5Hr1G073440.7	Barley	nucleus	34.45	17.31
HORVU3Hr1G094730.2	Barley	nucleus	34.93	17.02
HORVU7Hr1G110980.3	Barley	nucleus, plastid	32.54	15.14
HORVU5Hr1G076380.9	Barley	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	27.75	14.8
HORVU6Hr1G030490.2	Barley	nucleus, plastid	32.06	13.65
HORVU6Hr1G019700.3	Barley	nucleus	33.01	13.61
HORVU2Hr1G111620.1	Barley	cytosol, nucleus	0.48	1.56

Protein Annotations

EnsemblPlants:HORVU2Hr1G097580.1	EnsemblPlantsGene:HORVU2Hr1G097580	Gene3D:4.10.1100.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:IPR004333
InterPro:IPR036893	InterPro:SBP_dom	InterPro:SBP_sf	PANTHER:PTHR31251	PFAM:PF03110	PFscan:PS51141
SEG:seg	SUPFAM:SSF103612	UniParc:UPI000295D374	UniProt:M0YIK1	MapMan:15.5.18	:

Description

No Description!

Coordinates

chrchr2H:+:679640052..679642809

Molecular Weight (calculated)

22854.1 Da

IEP (calculated)

9.823

GRAVY (calculated)

-0.740

Length

209 amino acids

Sequence
(BLAST)

001: MEGDGDARSR AGLAWDLGMQ QWAPAASATY PQHFLPPPPP GVASHHHQQQ QHMQQELTSL KLGKRPCSLA GVQVAQVDGT GAAVVEGKRK EKAGAPATAA
101: MPRCQVEGCH MVLAGAKEYH RRHKVCEAHS KAPRVIVHGA EQRFCQQCSR FHAMAEFDDA KRSCRRRLAG HNERRRKSNA NDAMARGTAH AHGNPCHYSH
201: TSISAKYSC

Best Arabidopsis Sequence Match ( AT1G69170.1 )
(BLAST)

001: MDSWSYGRSV FMSNETLLPC DTFAKNRRFE QRLSNNDDVL ISDMAGNSNG FSAVSITKVV PEEEDEENIS SSSKFSSQEL NRIDFKLRSF LDLGNDDDDT
101: SSRGFALPSK KSRASNLCSQ NPLCQVYGCS KDLSSSKDYH KRHRVCEAHS KTSVVIVNGL EQRFCQQCSR FHFLSEFDDG KRSCRRRLAG HNERRRKPAF
201: YFLPGKRHKL LRTSQDVVGN KFLENSSLVL PESFPGSLLY RVIDEDDHRT SRLVSFKDEP TCSMFPTNEQ NSSRTYESKP AIYSTEVSSI WDLHETAASR
301: STRALSLLSA QSQQHLSKFP NTTFSITQPN QNLNHSSSTD YHQMEQPLWI DPGKTNSAGS SSCKGKGTST VDLLQLSSHL QRIEQQRNYT GDVKQEYNEL
401: YFPGS

Arabidopsis Description

SPL6Squamosa promoter-binding-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q94JW8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.