Factsheet for HORVU5Hr1G076380.9

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi, nucleus

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, secretory
Any Predictor:	nucleus, secretory
iPSORT:	secretory
MultiLoc:	nucleus
TargetP:	secretory

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G286000.1	Wheat	nucleus	76.02	68.82
TraesCS5D01G294400.1	Wheat	nucleus	75.51	68.52
TraesCS5A01G286700.2	Wheat	nucleus	74.74	67.2
Zm00001d006091_P001	Maize	nucleus	58.93	54.61
EER97011	Sorghum	nucleus	63.01	53.23
Zm00001d021056_P001	Maize	nucleus	61.48	51.83
HORVU0Hr1G039170.6	Barley	nucleus	52.04	51.0
Os09t0507100-00	Rice	nucleus	60.71	50.42
GSMUA_Achr7P22940_001	Banana	nucleus, vacuole	37.24	45.77
GSMUA_AchrUn_...	Banana	nucleus	37.24	41.71
GSMUA_AchrUn_...	Banana	nucleus	37.24	39.25
GSMUA_AchrUn_...	Banana	nucleus	34.95	38.81
GSMUA_Achr5P25090_001	Banana	nucleus	39.29	37.29
GSMUA_Achr4P16050_001	Banana	nucleus	31.89	34.72
GSMUA_Achr11P...	Banana	nucleus	36.73	34.7
HORVU2Hr1G048280.2	Barley	plastid	15.82	31.79
VIT_14s0068g01780.t01	Wine grape	nucleus	29.34	30.42
HORVU2Hr1G097610.1	Barley	nucleus	14.8	28.57
KRH06918	Soybean	nucleus	26.28	28.22
KRG94562	Soybean	nucleus	26.02	27.95
HORVU2Hr1G097580.1	Barley	nucleus	14.8	27.75
HORVU3Hr1G094730.2	Barley	nucleus	29.08	26.57
HORVU6Hr1G031450.6	Barley	nucleus	20.41	24.54
HORVU5Hr1G073440.7	Barley	nucleus	20.66	19.47
HORVU6Hr1G019700.3	Barley	nucleus	20.66	15.98
HORVU6Hr1G030490.2	Barley	nucleus, plastid	18.37	14.66
HORVU7Hr1G110980.3	Barley	nucleus, plastid	16.58	14.48
HORVU2Hr1G111620.1	Barley	cytosol, nucleus	0.26	1.56
CDX80286	Canola	cytosol, nucleus, plasma membrane	0.0	0.0

Protein Annotations

MapMan:15.5.18	Gene3D:4.10.1100.10	UniProt:A0A287RV33	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0016020	GO:GO:0016021	GO:GO:0046872	EnsemblPlantsGene:HORVU5Hr1G076380	EnsemblPlants:HORVU5Hr1G076380.9	InterPro:IPR004333
InterPro:IPR036893	PFAM:PF03110	PFscan:PS51141	PANTHER:PTHR31251	PANTHER:PTHR31251:SF33	InterPro:SBP_dom
InterPro:SBP_sf	SUPFAM:SSF103612	TMHMM:TMhelix	UniParc:UPI000B485527	SEG:seg	:

Description

No Description!

Coordinates

chrchr5H:-:551053445..551057341

Molecular Weight (calculated)

38901.9 Da

IEP (calculated)

7.799

GRAVY (calculated)

-0.181

Length

392 amino acids

Sequence
(BLAST)

001: IFHVIYVTIH RIFIVSFWVL FAFHFCYFAY XXXCFLWCSS IFIGICSFYV XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXSCAVDG CKADLSKCRD
101: YHRRHKVCEA HSKTPLVVVA GREMRFCQQC SRFHMLAEFD EAKRSCRKRL DGHNRRRRKP QVDSMNSGSF MTTQQGTRFA SFSAPRPEPS WSGIIKSEDS
201: NPFYSTHQVN FGGATSSYSK EGRRFPFLHE GDQMSFSTGA PALEIPVCQP LLKAVAPLPP PPESSSSNKM FSDGQLTHVL DSDCALSLLS SPANSSSVDV
301: SRMVRPSEHV PSVPSLQFGT SSWFACSQAS SGGGATGFAA TFPGGMDGEQ LNAGGALVPG SNDNEMNCHG IFHVGADGSS EGTSPSLPFS WQ

Best Arabidopsis Sequence Match ( AT5G50570.1 )
(BLAST)

001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE

Arabidopsis Description

SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.