Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 42.41 | 55.17 |
| GSMUA_Achr6P27520_001 | Banana | plastid | 18.8 | 50.98 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.54 | 50.81 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.13 | 50.71 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.41 | 50.29 |
| GSMUA_Achr2P06150_001 | Banana | nucleus | 44.58 | 47.07 |
| GSMUA_Achr6P06030_001 | Banana | nucleus | 40.72 | 45.8 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 44.82 | 45.04 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 37.83 | 43.61 |
| TraesCS7D01G261500.1 | Wheat | nucleus | 42.65 | 42.75 |
| TraesCS7A01G260500.1 | Wheat | nucleus | 41.93 | 42.75 |
| TraesCS7B01G158500.1 | Wheat | nucleus | 41.93 | 42.54 |
| HORVU0Hr1G039170.6 | Barley | nucleus | 40.96 | 42.5 |
| GSMUA_Achr9P01380_001 | Banana | nucleus | 37.83 | 42.09 |
| GSMUA_Achr9P29330_001 | Banana | nucleus | 37.83 | 41.1 |
| Zm00001d006091_P001 | Maize | nucleus | 40.96 | 40.19 |
| TraesCS5B01G286000.1 | Wheat | nucleus | 41.2 | 39.49 |
| TraesCS5D01G294400.1 | Wheat | nucleus | 40.96 | 39.35 |
| TraesCS5A01G286700.2 | Wheat | nucleus | 40.48 | 38.53 |
| EER97011 | Sorghum | nucleus | 42.41 | 37.93 |
| Os08t0531600-01 | Rice | nucleus | 41.2 | 37.58 |
| Zm00001d021056_P001 | Maize | nucleus | 41.45 | 36.99 |
| Zm00001d049824_P002 | Maize | nucleus | 38.55 | 36.78 |
| HORVU5Hr1G076380.9 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 34.7 | 36.73 |
| Zm00001d049822_P001 | Maize | nucleus | 38.07 | 36.57 |
| KXG25534 | Sorghum | nucleus | 40.0 | 36.4 |
| Os09t0507100-00 | Rice | nucleus | 39.52 | 34.75 |
| VIT_14s0068g01780.t01 | Wine grape | nucleus | 31.57 | 34.66 |
| EES01979 | Sorghum | nucleus | 31.08 | 32.01 |
| Zm00001d012015_P001 | Maize | nucleus | 28.92 | 32.0 |
| Os01t0922600-01 | Rice | nucleus | 23.37 | 31.19 |
| KRG94562 | Soybean | nucleus | 26.99 | 30.68 |
| GSMUA_Achr4P23650_001 | Banana | nucleus | 13.73 | 30.48 |
| KRH06918 | Soybean | nucleus | 26.75 | 30.41 |
| Zm00001d042319_P001 | Maize | nucleus | 29.64 | 30.07 |
| GSMUA_Achr1P08440_001 | Banana | nucleus | 13.01 | 28.88 |
| TraesCS3B01G468400.1 | Wheat | nucleus | 28.67 | 28.74 |
| TraesCS3A01G432500.1 | Wheat | nucleus | 28.19 | 28.19 |
| TraesCS3D01G425800.1 | Wheat | nucleus | 28.43 | 28.16 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 17.11 | 27.84 |
| GSMUA_Achr10P... | Banana | nucleus | 15.18 | 27.63 |
| HORVU3Hr1G094730.2 | Barley | nucleus | 28.19 | 27.27 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 17.59 | 26.84 |
| GSMUA_Achr4P03880_001 | Banana | nucleus | 18.31 | 26.67 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 17.35 | 26.28 |
| GSMUA_Achr2P03070_001 | Banana | nucleus | 13.49 | 26.05 |
| GSMUA_Achr5P13440_001 | Banana | mitochondrion, nucleus | 17.35 | 24.74 |
| GSMUA_Achr7P20510_001 | Banana | nucleus | 19.52 | 23.75 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 19.04 | 22.83 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 19.28 | 22.6 |
| GSMUA_Achr9P27660_001 | Banana | nucleus | 20.0 | 22.49 |
| GSMUA_Achr4P26940_001 | Banana | nucleus | 18.8 | 22.48 |
| GSMUA_Achr9P22260_001 | Banana | nucleus | 18.55 | 22.45 |
| GSMUA_Achr8P25550_001 | Banana | nucleus | 18.55 | 22.38 |
| GSMUA_Achr6P22280_001 | Banana | nucleus | 20.96 | 21.17 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 17.59 | 21.1 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 16.14 | 21.07 |
| GSMUA_Achr4P01450_001 | Banana | nucleus | 17.59 | 20.45 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 17.11 | 20.29 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 15.9 | 20.12 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 22.17 | 20.09 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 20.72 | 19.86 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 20.48 | 19.41 |
| GSMUA_Achr3P11170_001 | Banana | nucleus | 18.07 | 19.33 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 18.31 | 18.27 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 19.76 | 18.06 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 20.24 | 17.91 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 20.0 | 17.89 |
| TraesCS4D01G332700.1 | Wheat | nucleus | 9.4 | 17.81 |
| GSMUA_Achr10P... | Banana | nucleus | 21.45 | 17.66 |
| GSMUA_Achr9P20220_001 | Banana | nucleus | 10.36 | 17.48 |
| GSMUA_Achr10P... | Banana | nucleus | 20.48 | 17.45 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 19.04 | 14.99 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 0.72 | 5.17 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr11G19580_001 | EnsemblPlants:GSMUA_Achr11P19580_001 | EnsemblPlants:GSMUA_Achr11T19580_001 | InterPro:IPR004333 | InterPro:IPR036893 |
| UniProt:M0RTN8 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF33 | InterPro:SBP_dom |
| InterPro:SBP_sf | SUPFAM:SSF103612 | TMHMM:TMhelix | UniParc:UPI000294A12D | SEG:seg | : |
Description
Putative Squamosa promoter-binding-like protein 18 [Source:GMGC_GENE;Acc:GSMUA_Achr11G19580_001]
Coordinates
chr11:+:20672195..20676016
Molecular Weight (calculated)
46403.3 Da
IEP (calculated)
9.423
GRAVY (calculated)
-0.387
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWDLKMPPW CLAELDRDGS IINGTAGGPA VHRLASGPEC SVDLKLGGLS DSGSSYKWKD QLRVSSMSVP SSGPLKKQRA MSNASQKASC LVDGCKADLS
101: KCREYHRRHK VCEAHSKTPV VTVGGREQRF CQQCSRFHML VEFDEAKRSC RKRLEGHNRR RRKPQPSSLN SGIRFSAYPQ VHTTVTTEPN WTRIVRREED
201: TTVPVLIDRK TSNANSSHSY SEERKQFPFL QESETSLSNI TPLITSRLSG ISSSEMLSDG LTQVFHSDRA HSLLSSPTTQ TSLINPCHMM RSADGIVMGQ
301: PLVSSMQYSD LTQYSRVATE GVSLTGYSCS GVGGDDRART IMVSEANGVG IHRQKVFCRR GEGSTALPFS WQLLLSTCLV NPKIIRVIYW KIFQFIIFIA
401: VFLFYFTSSY QFWSA
101: KCREYHRRHK VCEAHSKTPV VTVGGREQRF CQQCSRFHML VEFDEAKRSC RKRLEGHNRR RRKPQPSSLN SGIRFSAYPQ VHTTVTTEPN WTRIVRREED
201: TTVPVLIDRK TSNANSSHSY SEERKQFPFL QESETSLSNI TPLITSRLSG ISSSEMLSDG LTQVFHSDRA HSLLSSPTTQ TSLINPCHMM RSADGIVMGQ
301: PLVSSMQYSD LTQYSRVATE GVSLTGYSCS GVGGDDRART IMVSEANGVG IHRQKVFCRR GEGSTALPFS WQLLLSTCLV NPKIIRVIYW KIFQFIIFIA
401: VFLFYFTSSY QFWSA
001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
Arabidopsis Description
SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.