Factsheet for Os01t0922600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01979	Sorghum	nucleus	63.34	48.88
TraesCS3B01G468400.1	Wheat	nucleus	64.95	48.79
TraesCS3A01G432500.1	Wheat	nucleus	64.95	48.67
Zm00001d012015_P001	Maize	nucleus	58.52	48.53
Zm00001d042319_P001	Maize	nucleus	63.34	48.17
TraesCS3D01G425800.1	Wheat	nucleus	64.31	47.73
HORVU3Hr1G094730.2	Barley	nucleus	64.95	47.09
GSMUA_Achr7P22940_001	Banana	nucleus, vacuole	33.76	32.92
GSMUA_AchrUn_...	Banana	nucleus	33.76	29.75
GSMUA_AchrUn_...	Banana	nucleus	35.05	29.3
GSMUA_AchrUn_...	Banana	nucleus	30.87	27.43
GSMUA_Achr4P16050_001	Banana	nucleus	30.87	26.67
GSMUA_Achr5P25090_001	Banana	nucleus	34.08	25.67
Os08t0531600-01	Rice	nucleus	36.33	24.84
VIT_14s0068g01780.t01	Wine grape	nucleus	29.26	24.07
Os09t0507100-00	Rice	nucleus	35.69	23.52
GSMUA_Achr11P...	Banana	nucleus	31.19	23.37
KRH06918	Soybean	nucleus	27.33	23.29
KRG94562	Soybean	nucleus	27.33	23.29
Os07t0505200-01	Rice	nucleus	16.08	23.15
Os02t0174100-02	Rice	nucleus	18.33	22.71
Os09t0491532-01	Rice	nucleus	20.9	20.12
Os06t0663500-00	Rice	nucleus	21.86	19.83
Os08t0509600-01	Rice	nucleus	23.79	17.75
Os02t0139400-01	Rice	nucleus	15.76	17.38
Os04t0551500-01	Rice	nucleus	18.65	16.11
Os04t0656500-01	Rice	nucleus	20.26	15.14
Os02t0177300-00	Rice	nucleus	21.22	14.1
Os06t0659100-00	Rice	nucleus	18.65	13.62
Os06t0703500-02	Rice	nucleus	19.94	13.05
CDX80286	Canola	cytosol, nucleus, plasma membrane	0.0	0.0

Protein Annotations

MapMan:15.5.18	Gene3D:4.10.1100.10	UniProt:A0A0P0VC85	ProteinID:BAS75951.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0046872	InterPro:IPR004333	InterPro:IPR036893	EnsemblPlantsGene:Os01g0922600	EnsemblPlants:Os01t0922600-01
PFAM:PF03110	PFscan:PS51141	PANTHER:PTHR31251	PANTHER:PTHR31251:SF63	InterPro:SBP_dom	InterPro:SBP_sf
SUPFAM:SSF103612	UniParc:UPI0000DD8E86	SEG:seg	:	:	:

Description

RICE SQUAMOSA PROMOTER-BINDING-LIKE 2Similar to SBP-domain protein 4. (Os01t0922600-01)

Coordinates

chr1:+:40332266..40335625

Molecular Weight (calculated)

33330.7 Da

IEP (calculated)

9.383

GRAVY (calculated)

-0.549

Length

311 amino acids

Sequence
(BLAST)

001: SKCVRDYHRR HKVCEAHSKT AVVTVAGQQQ RFCQQCSRFH LLGEFDEEKR SCRKRLDGHN KRRRKPQPDP LNPGNLFANH HGAARFTSYP QIFSTAASMS
101: PQETKWPANV VKTEAADVFQ EPYYHALHLN GAGAAAAASI FHHGGNKARK HHFPFLTADH GGGAAAASPL FGCQPFTITP SSESRSSSSS RHSNGKMFAH
201: DGGLDNCALS LLSDNPTPTA QITIPQPLFA GGGQYGGGGG GDVSLTGLSY VRMAGKDTSI LAKSATTTAT TATTPTTTSA QLQYHGYYHH HVSADQGSSD
301: AAIQALPFSS W

Best Arabidopsis Sequence Match ( AT5G50670.2 )
(BLAST)

001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE

Arabidopsis Description

SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.