Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G039170.6 | Barley | nucleus | 61.32 | 69.75 |
| TraesCS7D01G261500.1 | Wheat | nucleus | 62.42 | 68.6 |
| TraesCS7B01G158500.1 | Wheat | nucleus | 61.54 | 68.46 |
| TraesCS7A01G260500.1 | Wheat | nucleus | 60.88 | 68.06 |
| Zm00001d049822_P001 | Maize | nucleus | 61.54 | 64.81 |
| KXG25534 | Sorghum | nucleus | 64.62 | 64.47 |
| Zm00001d049824_P002 | Maize | nucleus | 61.1 | 63.91 |
| Os09t0507100-00 | Rice | nucleus | 58.68 | 56.57 |
| GSMUA_AchrUn_... | Banana | nucleus | 40.0 | 52.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.68 | 49.86 |
| GSMUA_AchrUn_... | Banana | nucleus | 40.22 | 49.19 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 33.85 | 48.28 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 39.56 | 43.58 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 32.97 | 41.67 |
| GSMUA_Achr11P... | Banana | nucleus | 37.58 | 41.2 |
| Os01t0922600-01 | Rice | nucleus | 24.84 | 36.33 |
| VIT_14s0068g01780.t01 | Wine grape | nucleus | 30.11 | 36.24 |
| KRG94562 | Soybean | nucleus | 26.59 | 33.15 |
| KRH06918 | Soybean | nucleus | 25.93 | 32.33 |
| Os02t0174100-02 | Rice | nucleus | 17.14 | 31.08 |
| Os07t0505200-01 | Rice | nucleus | 14.51 | 30.56 |
| Os02t0139400-01 | Rice | nucleus | 16.26 | 26.24 |
| Os06t0663500-00 | Rice | nucleus | 17.58 | 23.32 |
| Os09t0491532-01 | Rice | nucleus | 16.48 | 23.22 |
| Os04t0551500-01 | Rice | nucleus | 18.24 | 23.06 |
| Os08t0509600-01 | Rice | nucleus | 19.78 | 21.58 |
| Os04t0656500-01 | Rice | nucleus | 18.46 | 20.19 |
| Os06t0659100-00 | Rice | nucleus | 18.46 | 19.72 |
| Os06t0703500-02 | Rice | nucleus | 19.34 | 18.53 |
| Os02t0177300-00 | Rice | nucleus | 18.46 | 17.95 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 1.32 | 10.34 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | EntrezGene:4346133 | EMBL:AK109469 | ProteinID:BAD11641.1 | ProteinID:BAF24248.1 |
| ProteinID:BAT06401.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046872 | InterPro:IPR004333 |
| InterPro:IPR036893 | EnsemblPlantsGene:Os08g0531600 | EnsemblPlants:Os08t0531600-01 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 |
| PANTHER:PTHR31251:SF33 | UniProt:Q6YZE8 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI0000241682 |
| RefSeq:XP_015649377.1 | SEG:seg | : | : | : | : |
Description
GRAIN-WIDTH 8Transcription factor, Positive regulator of cell proliferation, Control of grain size, shape and quality (Os08t0531600-01)
Coordinates
chr8:+:26501167..26506198
Molecular Weight (calculated)
46581.5 Da
IEP (calculated)
7.502
GRAVY (calculated)
-0.336
Length
455 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWDLKMPPA ASWELADELE NSGGGGVPAA VSSSSAAVGG GVNAGGGGRQ ECSVDLKLGG LGEFGGGGAQ PRVAVAGEPA KGKGPAAAAT GAAAAASSAP
101: AKRPRGAAAA GQQQCPSCAV DGCKEDLSKC RDYHRRHKVC EAHSKTPLVV VSGREMRFCQ QCSRFHLLQE FDEAKRSCRK RLDGHNRRRR KPQPDPMNSA
201: SYLASQQGAR FSPFATPRPE ASWTGMIKTE ESPYYTHHQI PLGISSRQQH FVGSTSDGGR RFPFLQEGEI SFGTGAGAGG VPMDQAAAAA AASVCQPLLK
301: TVAPPPPPHG GGGSGGGKMF SDGGLTQVLD SDCALSLLSA PANSTAIDVG GGRVVVQPTE HIPMAQPLIS GLQFGGGGGS SAWFAARPHH QAATGAAATA
401: VVVSTAGFSC PVVESEQLNT VLSSNDNEMN YNGMFHVGGE GSSDGTSSSL PFSWQ
101: AKRPRGAAAA GQQQCPSCAV DGCKEDLSKC RDYHRRHKVC EAHSKTPLVV VSGREMRFCQ QCSRFHLLQE FDEAKRSCRK RLDGHNRRRR KPQPDPMNSA
201: SYLASQQGAR FSPFATPRPE ASWTGMIKTE ESPYYTHHQI PLGISSRQQH FVGSTSDGGR RFPFLQEGEI SFGTGAGAGG VPMDQAAAAA AASVCQPLLK
301: TVAPPPPPHG GGGSGGGKMF SDGGLTQVLD SDCALSLLSA PANSTAIDVG GGRVVVQPTE HIPMAQPLIS GLQFGGGGGS SAWFAARPHH QAATGAAATA
401: VVVSTAGFSC PVVESEQLNT VLSSNDNEMN YNGMFHVGGE GSSDGTSSSL PFSWQ
001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
Arabidopsis Description
SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.