Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P06150_001 | Banana | nucleus | 66.29 | 59.03 |
| GSMUA_Achr6P27520_001 | Banana | plastid | 22.57 | 51.63 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 46.29 | 50.78 |
| GSMUA_Achr9P01380_001 | Banana | nucleus | 52.0 | 48.79 |
| GSMUA_AchrUn_... | Banana | nucleus | 51.43 | 48.39 |
| GSMUA_Achr6P06030_001 | Banana | nucleus | 50.86 | 48.24 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.57 | 48.16 |
| GSMUA_Achr9P29330_001 | Banana | nucleus | 50.86 | 46.6 |
| HORVU0Hr1G039170.6 | Barley | nucleus | 52.86 | 46.25 |
| TraesCS7A01G260500.1 | Wheat | nucleus | 53.71 | 46.19 |
| TraesCS7B01G158500.1 | Wheat | nucleus | 53.14 | 45.48 |
| TraesCS7D01G261500.1 | Wheat | nucleus | 53.71 | 45.41 |
| GSMUA_Achr11P... | Banana | nucleus | 50.29 | 42.41 |
| Zm00001d006091_P001 | Maize | nucleus | 50.86 | 42.08 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 42.86 | 41.67 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 48.57 | 41.16 |
| EER97011 | Sorghum | nucleus | 53.14 | 40.09 |
| Os08t0531600-01 | Rice | nucleus | 52.0 | 40.0 |
| TraesCS5B01G286000.1 | Wheat | nucleus | 48.86 | 39.49 |
| TraesCS5D01G294400.1 | Wheat | nucleus | 48.57 | 39.35 |
| Zm00001d049824_P002 | Maize | nucleus | 48.57 | 39.08 |
| KXG25534 | Sorghum | nucleus | 50.57 | 38.82 |
| TraesCS5A01G286700.2 | Wheat | nucleus | 48.0 | 38.53 |
| Zm00001d049822_P001 | Maize | nucleus | 47.43 | 38.43 |
| Zm00001d021056_P001 | Maize | nucleus | 50.86 | 38.28 |
| Os09t0507100-00 | Rice | nucleus | 50.29 | 37.29 |
| HORVU5Hr1G076380.9 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 41.71 | 37.24 |
| VIT_14s0068g01780.t01 | Wine grape | nucleus | 37.14 | 34.39 |
| GSMUA_Achr4P23650_001 | Banana | nucleus | 17.43 | 32.62 |
| Zm00001d012015_P001 | Maize | nucleus | 34.86 | 32.53 |
| KRH06918 | Soybean | nucleus | 33.71 | 32.33 |
| KRG94562 | Soybean | nucleus | 33.71 | 32.33 |
| EES01979 | Sorghum | nucleus | 37.14 | 32.26 |
| GSMUA_Achr1P08440_001 | Banana | nucleus | 17.14 | 32.09 |
| Zm00001d042319_P001 | Maize | nucleus | 36.86 | 31.54 |
| Os01t0922600-01 | Rice | nucleus | 27.43 | 30.87 |
| TraesCS3B01G468400.1 | Wheat | nucleus | 36.0 | 30.43 |
| TraesCS3A01G432500.1 | Wheat | nucleus | 35.43 | 29.88 |
| TraesCS3D01G425800.1 | Wheat | nucleus | 35.43 | 29.59 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 21.14 | 29.02 |
| GSMUA_Achr10P... | Banana | nucleus | 18.86 | 28.95 |
| HORVU3Hr1G094730.2 | Barley | nucleus | 34.86 | 28.44 |
| GSMUA_Achr2P03070_001 | Banana | nucleus | 17.43 | 28.37 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 21.71 | 27.74 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 21.14 | 27.21 |
| GSMUA_Achr4P03880_001 | Banana | nucleus | 21.71 | 26.67 |
| GSMUA_Achr5P13440_001 | Banana | mitochondrion, nucleus | 21.43 | 25.77 |
| GSMUA_Achr7P20510_001 | Banana | nucleus | 23.43 | 24.05 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 23.43 | 23.7 |
| GSMUA_Achr4P26940_001 | Banana | nucleus | 23.14 | 23.34 |
| GSMUA_Achr9P22260_001 | Banana | nucleus | 22.86 | 23.32 |
| GSMUA_Achr8P25550_001 | Banana | nucleus | 22.57 | 22.97 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 20.86 | 22.96 |
| GSMUA_Achr9P27660_001 | Banana | nucleus | 23.71 | 22.49 |
| TraesCS4D01G332700.1 | Wheat | nucleus | 14.0 | 22.37 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 20.86 | 22.26 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 22.29 | 22.03 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 20.86 | 21.1 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 20.86 | 20.86 |
| GSMUA_Achr3P11170_001 | Banana | nucleus | 22.86 | 20.62 |
| GSMUA_Achr6P22280_001 | Banana | nucleus | 24.0 | 20.44 |
| GSMUA_Achr4P01450_001 | Banana | nucleus | 20.29 | 19.89 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 24.0 | 19.4 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 22.29 | 18.75 |
| GSMUA_Achr9P20220_001 | Banana | nucleus | 13.14 | 18.7 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 22.86 | 18.26 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 23.43 | 17.9 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 22.86 | 17.62 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 23.14 | 17.46 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 22.86 | 17.06 |
| GSMUA_Achr10P... | Banana | nucleus | 23.43 | 16.27 |
| GSMUA_Achr10P... | Banana | nucleus | 22.0 | 15.81 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 22.57 | 14.99 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 2.0 | 12.07 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_AchrUn_randomG21900_001 |
| EnsemblPlants:GSMUA_AchrUn_randomP21900_001 | EnsemblPlants:GSMUA_AchrUn_randomT21900_001 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:M0UB98 | PFAM:PF03110 |
| PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF33 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
| UniParc:UPI000296080B | SEG:seg | : | : | : | : |
Description
Putative Squamosa promoter-binding-like protein 16 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG21900_001]
Coordinates
chrchrUn_random:-:107090413..107092030
Molecular Weight (calculated)
37981.3 Da
IEP (calculated)
6.227
GRAVY (calculated)
-0.476
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWDPKLPSW GLAELEQTAE AKMGAMAGPS CSVDLKLGGG SGDAGPPEQW RDQPRSTTTT TMACSPSKRA RAPSMASQTA SCLVDGCRAD LSSCKEYHRR
101: HKVCELHSKT PVVVVGGVEQ RFCQQCSRFH LLTEFDEEKR SCRKRLDGHN RRRRKPQSES INSPTLLPLY QGTRFSTYPH VSQILPTQPS WAGIIKTEED
201: ALYTHGHHCF PPGSFSNIYK QDKAAYGRTA METVSAAESS SRIFSDGLTQ VLDSDCALSL LSSPTQTSTI NVGRMLSAGV VAVGEPLVSS LQYSGFSCSR
301: VEDDQTGGVL ISDADADADT DADLHCQDIF HVGGEGSSDV ASHSLPFSWQ
101: HKVCELHSKT PVVVVGGVEQ RFCQQCSRFH LLTEFDEEKR SCRKRLDGHN RRRRKPQSES INSPTLLPLY QGTRFSTYPH VSQILPTQPS WAGIIKTEED
201: ALYTHGHHCF PPGSFSNIYK QDKAAYGRTA METVSAAESS SRIFSDGLTQ VLDSDCALSL LSSPTQTSTI NVGRMLSAGV VAVGEPLVSS LQYSGFSCSR
301: VEDDQTGGVL ISDADADADT DADLHCQDIF HVGGEGSSDV ASHSLPFSWQ
001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
Arabidopsis Description
SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.