Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 59.03 | 66.29 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 43.77 | 53.92 |
| GSMUA_Achr9P29330_001 | Banana | nucleus | 51.4 | 52.88 |
| GSMUA_Achr6P06030_001 | Banana | nucleus | 49.62 | 52.85 |
| GSMUA_AchrUn_... | Banana | nucleus | 49.87 | 52.69 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.07 | 52.41 |
| GSMUA_Achr6P27520_001 | Banana | plastid | 20.36 | 52.29 |
| GSMUA_Achr9P01380_001 | Banana | nucleus | 49.62 | 52.28 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 48.6 | 46.25 |
| GSMUA_Achr11P... | Banana | nucleus | 47.07 | 44.58 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 40.46 | 44.17 |
| VIT_14s0068g01780.t01 | Wine grape | nucleus | 37.4 | 38.89 |
| KRH06918 | Soybean | nucleus | 34.61 | 37.26 |
| KRG94562 | Soybean | nucleus | 34.61 | 37.26 |
| GSMUA_Achr1P08440_001 | Banana | nucleus | 16.29 | 34.22 |
| GSMUA_Achr4P23650_001 | Banana | nucleus | 15.01 | 31.55 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 17.81 | 27.45 |
| GSMUA_Achr2P03070_001 | Banana | nucleus | 15.01 | 27.44 |
| GSMUA_Achr4P03880_001 | Banana | nucleus | 19.85 | 27.37 |
| GSMUA_Achr10P... | Banana | nucleus | 15.78 | 27.19 |
| GSMUA_Achr7P20510_001 | Banana | nucleus | 22.9 | 26.39 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 17.56 | 25.18 |
| GSMUA_Achr5P13440_001 | Banana | mitochondrion, nucleus | 18.58 | 25.09 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 21.88 | 24.86 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 17.05 | 24.63 |
| GSMUA_Achr9P22260_001 | Banana | nucleus | 21.37 | 24.49 |
| GSMUA_Achr8P25550_001 | Banana | nucleus | 21.37 | 24.42 |
| GSMUA_Achr9P27660_001 | Banana | nucleus | 22.39 | 23.85 |
| GSMUA_Achr4P26940_001 | Banana | nucleus | 20.87 | 23.63 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 18.83 | 23.27 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 20.1 | 22.32 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 19.59 | 22.25 |
| GSMUA_Achr6P22280_001 | Banana | nucleus | 22.39 | 21.41 |
| GSMUA_Achr3P11170_001 | Banana | nucleus | 21.12 | 21.39 |
| GSMUA_Achr4P01450_001 | Banana | nucleus | 19.34 | 21.29 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 18.83 | 21.14 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 17.3 | 20.73 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 22.65 | 20.55 |
| GSMUA_Achr9P20220_001 | Banana | nucleus | 12.72 | 20.33 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 22.39 | 20.09 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 23.41 | 20.09 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 22.9 | 19.4 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 21.63 | 18.72 |
| GSMUA_Achr10P... | Banana | nucleus | 23.92 | 18.65 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 21.88 | 18.34 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 19.34 | 18.27 |
| GSMUA_Achr10P... | Banana | nucleus | 21.63 | 17.45 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 22.65 | 16.89 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 1.27 | 8.62 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr2G06150_001 |
| EnsemblPlants:GSMUA_Achr2P06150_001 | EnsemblPlants:GSMUA_Achr2T06150_001 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:M0S5K6 | PFAM:PF03110 |
| PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF33 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
| UniParc:UPI0002961FE5 | SEG:seg | : | : | : | : |
Description
Putative Squamosa promoter-binding-like protein 16 [Source:GMGC_GENE;Acc:GSMUA_Achr2G06150_001]
Coordinates
chr2:+:11037350..11039971
Molecular Weight (calculated)
42564.6 Da
IEP (calculated)
6.952
GRAVY (calculated)
-0.480
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWDYKMPPW DLAELEQSAE PSMGAVVGPS CNLRSQAEGA DCSVDLKLGG SPEKWKSQSK TTTAVSSSSP SKRARAPGAG SQNAACSVDG CNSDLSNCRE
101: YHRRHKVCEI HSKTPIVMVG GVEQRFCQQC SRFHLLIEFD EVKRSCRKRL DGHNRRRRKP QPESATSANL FPIQQGTRFS TCAYISQAPL TEPNWSAIVK
201: AEKDALYTHH TPLHLIDSQH HFPGSFSCSY KERKQFPFLQ DGKAAFSRTA VEASICQPLL NTVPSVESSS SSSSSKLFSD GLTQAINSEC ALSLLSSPTQ
301: TSSISVDHML PTNRIPVGQP LVPSLQYSSL NPYSGSPASG SVLPTEFSCS GAEDEQAGGV LVSDTDLHCQ GMFQIGGEGA NDGASPSLHF SWQ
101: YHRRHKVCEI HSKTPIVMVG GVEQRFCQQC SRFHLLIEFD EVKRSCRKRL DGHNRRRRKP QPESATSANL FPIQQGTRFS TCAYISQAPL TEPNWSAIVK
201: AEKDALYTHH TPLHLIDSQH HFPGSFSCSY KERKQFPFLQ DGKAAFSRTA VEASICQPLL NTVPSVESSS SSSSSKLFSD GLTQAINSEC ALSLLSSPTQ
301: TSSISVDHML PTNRIPVGQP LVPSLQYSSL NPYSGSPASG SVLPTEFSCS GAEDEQAGGV LVSDTDLHCQ GMFQIGGEGA NDGASPSLHF SWQ
001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
Arabidopsis Description
SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.