Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P25550_001 | Banana | nucleus | 55.78 | 56.1 |
| GSMUA_Achr4P01450_001 | Banana | nucleus | 56.94 | 55.18 |
| GSMUA_Achr9P27660_001 | Banana | nucleus | 53.18 | 49.86 |
| GSMUA_Achr3P11170_001 | Banana | nucleus | 55.78 | 49.74 |
| TraesCS7A01G246500.1 | Wheat | nucleus | 50.29 | 45.08 |
| Os09t0491532-01 | Rice | nucleus | 41.91 | 44.89 |
| TraesCS7B01G144900.1 | Wheat | nucleus | 50.0 | 44.82 |
| Zm00001d020941_P001 | Maize | nucleus | 48.84 | 44.71 |
| EER99092 | Sorghum | nucleus | 49.42 | 44.07 |
| TraesCS7D01G245200.2 | Wheat | nucleus | 48.84 | 43.9 |
| Zm00001d006028_P001 | Maize | nucleus | 47.98 | 43.34 |
| EES14266 | Sorghum | nucleus | 49.42 | 41.81 |
| Zm00001d031451_P001 | Maize | nucleus | 48.55 | 41.69 |
| Os08t0509600-01 | Rice | nucleus | 50.0 | 41.49 |
| Zm00001d052890_P001 | Maize | nucleus | 46.82 | 39.71 |
| GSMUA_Achr4P03880_001 | Banana | nucleus | 31.21 | 37.89 |
| GSMUA_Achr7P20510_001 | Banana | nucleus | 36.71 | 37.24 |
| GSMUA_Achr6P27520_001 | Banana | plastid | 15.9 | 35.95 |
| GSMUA_Achr9P22260_001 | Banana | nucleus | 33.81 | 34.11 |
| GSMUA_Achr4P23650_001 | Banana | nucleus | 18.21 | 33.69 |
| VIT_08s0007g06270.t01 | Wine grape | nucleus | 36.42 | 33.25 |
| GSMUA_Achr1P08440_001 | Banana | nucleus | 17.92 | 33.16 |
| KRH67040 | Soybean | nucleus | 33.53 | 31.61 |
| KRH71914 | Soybean | nucleus, plastid | 32.66 | 31.56 |
| CDY61750 | Canola | nucleus | 28.03 | 31.49 |
| KRG95361 | Soybean | nucleus | 32.37 | 31.2 |
| KRH38141 | Soybean | nucleus, plastid | 33.53 | 31.1 |
| CDX98259 | Canola | nucleus | 29.19 | 31.08 |
| Bra003305.1-P | Field mustard | nucleus | 28.03 | 30.7 |
| Solyc10g078700.1.1 | Tomato | nucleus | 32.95 | 30.65 |
| PGSC0003DMT400029751 | Potato | nucleus | 32.95 | 30.65 |
| GSMUA_Achr2P03070_001 | Banana | nucleus | 18.79 | 30.23 |
| AT2G42200.1 | Thale cress | nucleus | 32.66 | 30.13 |
| CDX67715 | Canola | nucleus | 27.46 | 30.06 |
| CDX79888 | Canola | nucleus | 31.79 | 29.89 |
| CDY53504 | Canola | nucleus | 31.79 | 29.73 |
| CDY47656 | Canola | nucleus | 27.75 | 29.63 |
| CDY06881 | Canola | nucleus | 30.92 | 29.48 |
| Bra016891.1-P | Field mustard | nucleus | 30.92 | 29.48 |
| Bra014599.1-P | Field mustard | nucleus | 25.72 | 29.47 |
| CDY14818 | Canola | nucleus | 31.21 | 29.43 |
| AT3G57920.1 | Thale cress | nucleus | 30.06 | 29.38 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 21.39 | 29.02 |
| Bra004674.1-P | Field mustard | nucleus | 30.64 | 28.73 |
| GSMUA_Achr6P22280_001 | Banana | nucleus | 33.81 | 28.47 |
| GSMUA_Achr9P20220_001 | Banana | nucleus | 19.94 | 28.05 |
| GSMUA_Achr10P... | Banana | nucleus | 18.21 | 27.63 |
| GSMUA_Achr5P13440_001 | Banana | mitochondrion, nucleus | 22.25 | 26.46 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 19.65 | 25.0 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 19.65 | 24.82 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 22.25 | 24.21 |
| GSMUA_Achr4P26940_001 | Banana | nucleus | 23.7 | 23.63 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 21.68 | 23.51 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 22.25 | 23.48 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.7 | 23.43 |
| GSMUA_Achr6P06030_001 | Banana | nucleus | 24.57 | 23.04 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 23.12 | 22.86 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 22.83 | 22.83 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 22.54 | 22.03 |
| GSMUA_Achr2P06150_001 | Banana | nucleus | 24.86 | 21.88 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.25 | 21.81 |
| GSMUA_Achr9P01380_001 | Banana | nucleus | 23.41 | 21.72 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 25.72 | 21.39 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 21.97 | 21.11 |
| GSMUA_Achr9P29330_001 | Banana | nucleus | 23.12 | 20.94 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.25 | 20.7 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 23.99 | 20.1 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 25.14 | 20.09 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 26.59 | 19.83 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 25.72 | 19.43 |
| GSMUA_Achr11P... | Banana | nucleus | 22.83 | 19.04 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 25.43 | 18.76 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 23.99 | 18.28 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 23.12 | 18.26 |
| GSMUA_Achr10P... | Banana | nucleus | 25.72 | 17.66 |
| GSMUA_Achr10P... | Banana | nucleus | 24.57 | 17.45 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 24.28 | 15.94 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr7G02020_001 |
| EnsemblPlants:GSMUA_Achr7P02020_001 | EnsemblPlants:GSMUA_Achr7T02020_001 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:M0TDZ2 | PFAM:PF03110 |
| PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF59 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
| UniParc:UPI0002969CDD | SEG:seg | : | : | : | : |
Description
Putative Squamosa promoter-binding-like protein 17 [Source:GMGC_GENE;Acc:GSMUA_Achr7G02020_001]
Coordinates
chr7:+:1558808..1563805
Molecular Weight (calculated)
37117.8 Da
IEP (calculated)
8.550
GRAVY (calculated)
-0.488
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMGSSSVGV SGASSGSSDS LHGLKFGKKI YFEDGGGNSS KDALAPASQP PRCQVDGCKV DLTGAKTYYC KHKVCGMHSK APKVTVAGLE QRFCQQCSRF
101: HQLPEFDQGK RSCRRRLAGH NERRRKPPPP GPFASRHCHH TPSFHEELGR ARSFPVDFSC PRFSTTTRDV WPTIAPGDWV AGNHCLGVLY PLSSGAVVHG
201: AHPCMHGHLE GPLYSITKPP LRDCLSGASD SSCALSLLST QPWNHNTARN QVPTISVSSC LDGTPMARST VSDNCMTRSW GFIGHGGRPN PQNIQHIAGG
301: VGRVAEVGDG QISGMLELAR HGDGQCLHGS SGTAYDESGQ VMRWSL
101: HQLPEFDQGK RSCRRRLAGH NERRRKPPPP GPFASRHCHH TPSFHEELGR ARSFPVDFSC PRFSTTTRDV WPTIAPGDWV AGNHCLGVLY PLSSGAVVHG
201: AHPCMHGHLE GPLYSITKPP LRDCLSGASD SSCALSLLST QPWNHNTARN QVPTISVSSC LDGTPMARST VSDNCMTRSW GFIGHGGRPN PQNIQHIAGG
301: VGRVAEVGDG QISGMLELAR HGDGQCLHGS SGTAYDESGQ VMRWSL
001: MELLMCSGQA ESGGSSSTES SSLSGGLRFG QKIYFEDGSG SRSKNRVNTV RKSSTTARCQ VEGCRMDLSN VKAYYSRHKV CCIHSKSSKV IVSGLHQRFC
101: QQCSRFHQLS EFDLEKRSCR RRLACHNERR RKPQPTTALF TSHYSRIAPS LYGNPNAAMI KSVLGDPTAW STARSVMQRP GPWQINPVRE THPHMNVLSH
201: GSSSFTTCPE MINNNSTDSS CALSLLSNSY PIHQQQLQTP TNTWRPSSGF DSMISFSDKV TMAQPPPIST HQPPISTHQQ YLSQTWEVIA GEKSNSHYMS
301: PVSQISEPAD FQISNGTTMG GFELYLHQQV LKQYMEPENT RAYDSSPQHF NWSL
101: QQCSRFHQLS EFDLEKRSCR RRLACHNERR RKPQPTTALF TSHYSRIAPS LYGNPNAAMI KSVLGDPTAW STARSVMQRP GPWQINPVRE THPHMNVLSH
201: GSSSFTTCPE MINNNSTDSS CALSLLSNSY PIHQQQLQTP TNTWRPSSGF DSMISFSDKV TMAQPPPIST HQPPISTHQQ YLSQTWEVIA GEKSNSHYMS
301: PVSQISEPAD FQISNGTTMG GFELYLHQQV LKQYMEPENT RAYDSSPQHF NWSL
Arabidopsis Description
SPL15Squamosa promoter-binding-like protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Q6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.