Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99092 | Sorghum | nucleus | 71.52 | 59.54 |
| Zm00001d020941_P001 | Maize | nucleus | 66.56 | 56.88 |
| Zm00001d006028_P001 | Maize | nucleus | 66.56 | 56.14 |
| TraesCS7B01G144900.1 | Wheat | nucleus | 63.78 | 53.37 |
| TraesCS7A01G246500.1 | Wheat | nucleus | 63.47 | 53.11 |
| TraesCS7D01G245200.2 | Wheat | nucleus | 62.54 | 52.47 |
| Os08t0509600-01 | Rice | nucleus | 62.85 | 48.68 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 44.89 | 41.91 |
| VIT_08s0007g06270.t01 | Wine grape | nucleus | 31.58 | 26.91 |
| Os07t0505200-01 | Rice | nucleus | 17.65 | 26.39 |
| Solyc10g078700.1.1 | Tomato | nucleus | 29.72 | 25.81 |
| PGSC0003DMT400029751 | Potato | nucleus | 29.41 | 25.54 |
| KRG95361 | Soybean | nucleus | 27.86 | 25.07 |
| CDY06881 | Canola | nucleus | 27.86 | 24.79 |
| Bra016891.1-P | Field mustard | nucleus | 27.86 | 24.79 |
| KRH71914 | Soybean | nucleus, plastid | 27.24 | 24.58 |
| KRH67040 | Soybean | nucleus | 27.86 | 24.52 |
| CDY14818 | Canola | nucleus | 27.24 | 23.98 |
| CDX79888 | Canola | nucleus | 27.24 | 23.91 |
| KRH38141 | Soybean | nucleus, plastid | 27.55 | 23.86 |
| CDY53504 | Canola | nucleus | 27.24 | 23.78 |
| CDX98259 | Canola | nucleus | 23.53 | 23.38 |
| Bra004674.1-P | Field mustard | nucleus | 26.63 | 23.31 |
| AT2G42200.1 | Thale cress | nucleus | 26.93 | 23.2 |
| CDY47656 | Canola | nucleus | 22.29 | 22.22 |
| Bra003305.1-P | Field mustard | nucleus | 21.67 | 22.15 |
| CDY61750 | Canola | nucleus | 21.05 | 22.08 |
| AT3G57920.1 | Thale cress | nucleus | 24.15 | 22.03 |
| CDX67715 | Canola | nucleus | 21.36 | 21.84 |
| Os01t0922600-01 | Rice | nucleus | 20.12 | 20.9 |
| Os02t0174100-02 | Rice | nucleus | 15.79 | 20.32 |
| Os04t0551500-01 | Rice | nucleus | 22.6 | 20.28 |
| Bra014599.1-P | Field mustard | nucleus | 18.58 | 19.87 |
| Os06t0663500-00 | Rice | nucleus | 21.05 | 19.83 |
| Os04t0656500-01 | Rice | nucleus | 24.77 | 19.23 |
| Os02t0139400-01 | Rice | nucleus | 15.17 | 17.38 |
| Os08t0531600-01 | Rice | nucleus | 23.22 | 16.48 |
| Os09t0507100-00 | Rice | nucleus | 22.29 | 15.25 |
| Os06t0703500-02 | Rice | nucleus | 21.36 | 14.53 |
| Os02t0177300-00 | Rice | nucleus | 20.12 | 13.89 |
| Os06t0659100-00 | Rice | nucleus | 18.27 | 13.85 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | UniProt:B9G4A6 | ProteinID:BAH94637.1 | ProteinID:BAT08733.1 | ProteinID:EEE69954.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046872 | InterPro:IPR004333 | InterPro:IPR036893 |
| EnsemblPlantsGene:Os09g0491532 | EnsemblPlants:Os09t0491532-01 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF59 |
| InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI00018F0EE5 | SEG:seg | : |
Description
RICE SQUAMOSA PROMOTER-BINDING-LIKE 17Similar to Squamosa-promoter binding protein 2. (Os09t0491532-01)
Coordinates
chr9:-:18918260..18921753
Molecular Weight (calculated)
33969.2 Da
IEP (calculated)
8.219
GRAVY (calculated)
-0.593
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGGSGGGG GGGGGGDDVH GRHKVCYMHA KEPIVVVAGL EQRFCQQCSR FHQLPEFDQE KKSCRRRLAG HNERRRKPTP GPLSSRYGRL AASFHEEPGR
101: SRSFVVDFSY PRVPSSVRDA WPAIQPSDRM SGSIQWQGGH ELHPHRSAVA GYSDHHAFSS HGGSAAGAPM LHHPAFELTS GGCLAGVATD SSCALSLLST
201: QPWDTTQSTS SHNRSPPMSS TASAFGGGNN PVSPSVMASN YMAASPGWNS SSRGHDGARN VHLPPPHGVV LNEVPPGSVH HGHFSGELEL ALQGGAPSNR
301: PEAEHGSGSG AFSHSTNAMN WSL
101: SRSFVVDFSY PRVPSSVRDA WPAIQPSDRM SGSIQWQGGH ELHPHRSAVA GYSDHHAFSS HGGSAAGAPM LHHPAFELTS GGCLAGVATD SSCALSLLST
201: QPWDTTQSTS SHNRSPPMSS TASAFGGGNN PVSPSVMASN YMAASPGWNS SSRGHDGARN VHLPPPHGVV LNEVPPGSVH HGHFSGELEL ALQGGAPSNR
301: PEAEHGSGSG AFSHSTNAMN WSL
001: MEMGSNSGPG HGPGQAESGG SSTESSSFSG GLMFGQKIYF EDGGGGSGSS SSGGRSNRRV RGGGSGQSGQ IPRCQVEGCG MDLTNAKGYY SRHRVCGVHS
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
Arabidopsis Description
SPL9Squamosa promoter-binding-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q700W2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.