Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G245200.2 | Wheat | nucleus | 95.34 | 95.58 |
| TraesCS7B01G144900.1 | Wheat | nucleus | 95.08 | 95.08 |
| Os09t0491532-01 | Rice | nucleus | 53.11 | 63.47 |
| Zm00001d020941_P001 | Maize | nucleus | 61.4 | 62.7 |
| EER99092 | Sorghum | nucleus | 62.18 | 61.86 |
| Os08t0509600-01 | Rice | nucleus | 65.03 | 60.19 |
| Zm00001d006028_P001 | Maize | nucleus | 57.77 | 58.22 |
| TraesCS5A01G265900.2 | Wheat | nucleus | 57.51 | 54.01 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 45.08 | 50.29 |
| TraesCS2A01G232400.1 | Wheat | nucleus | 17.88 | 35.94 |
| KRG95361 | Soybean | nucleus | 32.9 | 35.38 |
| KRH67040 | Soybean | nucleus | 32.64 | 34.33 |
| VIT_08s0007g06270.t01 | Wine grape | nucleus | 32.64 | 33.25 |
| KRH38141 | Soybean | nucleus, plastid | 31.61 | 32.71 |
| KRH71914 | Soybean | nucleus, plastid | 30.05 | 32.4 |
| PGSC0003DMT400029751 | Potato | nucleus | 29.79 | 30.91 |
| Solyc10g078700.1.1 | Tomato | nucleus | 29.53 | 30.65 |
| CDX79888 | Canola | nucleus | 27.98 | 29.35 |
| Bra016891.1-P | Field mustard | nucleus | 27.46 | 29.2 |
| CDY06881 | Canola | nucleus | 27.46 | 29.2 |
| CDY14818 | Canola | nucleus | 27.72 | 29.16 |
| AT2G42200.1 | Thale cress | nucleus | 28.24 | 29.07 |
| CDX98259 | Canola | nucleus | 24.35 | 28.92 |
| CDY53504 | Canola | nucleus | 27.72 | 28.92 |
| Bra004674.1-P | Field mustard | nucleus | 26.94 | 28.18 |
| CDY61750 | Canola | nucleus | 22.02 | 27.6 |
| Bra003305.1-P | Field mustard | nucleus | 22.54 | 27.53 |
| CDY47656 | Canola | nucleus | 23.06 | 27.47 |
| CDX67715 | Canola | nucleus | 22.02 | 26.9 |
| AT3G57920.1 | Thale cress | nucleus | 23.83 | 25.99 |
| TraesCS2A01G413900.1 | Wheat | nucleus | 23.06 | 25.5 |
| Bra014599.1-P | Field mustard | nucleus | 19.95 | 25.5 |
| TraesCS6A01G155300.1 | Wheat | nucleus | 20.21 | 23.78 |
| TraesCS2A01G502300.1 | Wheat | nucleus | 23.58 | 22.09 |
| TraesCS7A01G260500.1 | Wheat | nucleus | 23.06 | 21.87 |
| TraesCS3A01G432500.1 | Wheat | nucleus | 23.32 | 21.69 |
| TraesCS7A01G494800.1 | Wheat | nucleus | 20.47 | 19.8 |
| TraesCS7A01G494900.1 | Wheat | nucleus | 20.21 | 19.8 |
| TraesCS7A01G495100.1 | Wheat | nucleus | 21.24 | 19.57 |
| TraesCS7A01G495000.1 | Wheat | nucleus | 20.47 | 19.46 |
| TraesCS5A01G286700.2 | Wheat | nucleus | 21.76 | 19.27 |
| TraesCS6A01G110100.2 | Wheat | nucleus | 23.06 | 18.74 |
| TraesCS6A01G152000.1 | Wheat | nucleus | 19.69 | 16.96 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G246500.1 | EnsemblPlantsGene:TraesCS7A01G246500 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR004333 |
| InterPro:IPR036893 | InterPro:SBP_dom | InterPro:SBP_sf | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF67 | PFAM:PF03110 |
| PFscan:PS51141 | SEG:seg | SUPFAM:SSF103612 | MapMan:15.5.18 | : | : |
Description
No Description!
Coordinates
chr7A:-:225631659..225636167
Molecular Weight (calculated)
40283.7 Da
IEP (calculated)
8.843
GRAVY (calculated)
-0.751
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIGSGGCGG GDGSGGGGGD DQQRHGLKFG KKIYFEDSTG PGGGSGGVNA SSSKPPAGGG RKGKAVAAGG ASGSAPPRCQ VEGCGVDLSG AKQYHCRHKV
101: CSMHTKEPRV VVAGLEQRFC QQCSRFHQLP EFDQGKRSCR RRLAGHNERR RKAPPGPLAT RYGRLAASFE EPGRFRSYLL DFSYPRVPSS VRDAWPGARL
201: GYRMPGEIQW QGNLDLRPHT GAGTGYGHHH AYSSHGGFPG PELPPGGCLA GVAADSSCAL SLLSTQPWDN TPHGASHDHR SAGFDGHPVG VSPSIMASNY
301: MPPPASPWGG SRGHEGGRNA PHQQLPHDVQ LHEVHHPAGS SQHGHFSGEL ELALQGNRPA PGPRGGDHGS SGGAFDHPGS SSNWSL
101: CSMHTKEPRV VVAGLEQRFC QQCSRFHQLP EFDQGKRSCR RRLAGHNERR RKAPPGPLAT RYGRLAASFE EPGRFRSYLL DFSYPRVPSS VRDAWPGARL
201: GYRMPGEIQW QGNLDLRPHT GAGTGYGHHH AYSSHGGFPG PELPPGGCLA GVAADSSCAL SLLSTQPWDN TPHGASHDHR SAGFDGHPVG VSPSIMASNY
301: MPPPASPWGG SRGHEGGRNA PHQQLPHDVQ LHEVHHPAGS SQHGHFSGEL ELALQGNRPA PGPRGGDHGS SGGAFDHPGS SSNWSL
001: MEMGSNSGPG HGPGQAESGG SSTESSSFSG GLMFGQKIYF EDGGGGSGSS SSGGRSNRRV RGGGSGQSGQ IPRCQVEGCG MDLTNAKGYY SRHRVCGVHS
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
Arabidopsis Description
SPL9Squamosa promoter-binding-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q700W2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.