Factsheet for TraesCS7A01G260500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G261500.1	Wheat	nucleus	97.79	96.14
TraesCS7B01G158500.1	Wheat	nucleus	96.07	95.6
HORVU0Hr1G039170.6	Barley	nucleus	91.15	92.75
KXG25534	Sorghum	nucleus	73.96	66.01
Zm00001d049822_P001	Maize	nucleus	68.55	64.58
Zm00001d049824_P002	Maize	nucleus	68.06	63.68
Os08t0531600-01	Rice	nucleus	68.06	60.88
TraesCS5A01G286700.2	Wheat	nucleus	62.41	58.26
GSMUA_AchrUn_...	Banana	nucleus	46.19	53.71
GSMUA_AchrUn_...	Banana	nucleus	44.23	48.39
GSMUA_Achr7P22940_001	Banana	nucleus, vacuole	37.84	48.28
GSMUA_AchrUn_...	Banana	nucleus	40.54	46.74
GSMUA_Achr5P25090_001	Banana	nucleus	45.7	45.04
GSMUA_Achr11P...	Banana	nucleus	42.75	41.93
GSMUA_Achr4P16050_001	Banana	nucleus	36.12	40.83
VIT_14s0068g01780.t01	Wine grape	nucleus	35.14	37.83
TraesCS3A01G432500.1	Wheat	nucleus	35.87	35.18
TraesCS2A01G232400.1	Wheat	nucleus	16.22	34.38
KRG94562	Soybean	nucleus	30.71	34.25
KRH06918	Soybean	nucleus	29.98	33.42
TraesCS6A01G155300.1	Wheat	nucleus	21.38	26.52
TraesCS2A01G413900.1	Wheat	nucleus	20.39	23.78
TraesCS7A01G246500.1	Wheat	nucleus	21.87	23.06
TraesCS7A01G494800.1	Wheat	nucleus	21.38	21.8
TraesCS5A01G265900.2	Wheat	nucleus	21.87	21.65
TraesCS7A01G494900.1	Wheat	nucleus	20.64	21.32
TraesCS7A01G495100.1	Wheat	nucleus	21.87	21.24
TraesCS7A01G495000.1	Wheat	nucleus	20.88	20.94
TraesCS2A01G502300.1	Wheat	nucleus	21.13	20.87
TraesCS6A01G110100.2	Wheat	nucleus	21.87	18.74
TraesCS6A01G152000.1	Wheat	nucleus	20.15	18.3
CDX80286	Canola	cytosol, nucleus, plasma membrane	0.98	6.9

Protein Annotations

EnsemblPlants:TraesCS7A01G260500.1	EnsemblPlantsGene:TraesCS7A01G260500	Gene3D:4.10.1100.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:IPR004333
InterPro:IPR036893	InterPro:SBP_dom	InterPro:SBP_sf	PANTHER:PTHR31251	PANTHER:PTHR31251:SF33	PFAM:PF03110
PFscan:PS51141	SEG:seg	SUPFAM:SSF103612	MapMan:15.5.18	:	:

Description

No Description!

Coordinates

chr7A:+:252715654..252720713

Molecular Weight (calculated)

43229.2 Da

IEP (calculated)

6.954

GRAVY (calculated)

-0.532

Length

407 amino acids

Sequence
(BLAST)

001: MDWDLKMPPG AWDLAELEGD APAAGGQASA GGIANAAGRQ ECSVDLKLGG LGECGAAPDS RGLGKAPAEA PSSAPSAAKR PRASSGGGGG SGSGAGQQQC
101: PSCAVDGCRA DLSRCRDYHR RHKVCEAHSK TPVVTVAGRE MRFCQQCSRF HLLTEFDETK RSCRKRLDGH NRRRRKPQPD VMNSASFMTS QQGTRFSSFP
201: TPRPEQNWQG IIKTEENPYY AHQLPLGISS RQHFGGSAST YAKEGRRFPF LQEGEINFAT GVALEPSVCQ PLLKTVAPPE SSSSSSKMFS DGLTPVLDSD
301: CALSLLSAPA NSSGIDVGQM VQQTEHIPIA QPLFSNLQFS SSSWFSRTQA STGTVSATGF SCPAVENEQL NNVLSSDNND LNYNGIFHVG GEGSSDGAPP
401: SLPFPWQ

Best Arabidopsis Sequence Match ( AT5G50670.2 )
(BLAST)

001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE

Arabidopsis Description

SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.