Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 74.22 | 70.43 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 50.14 | 55.49 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 52.41 | 51.39 |
| GSMUA_AchrUn_... | Banana | nucleus | 48.16 | 48.57 |
| GSMUA_Achr2P06150_001 | Banana | nucleus | 52.41 | 47.07 |
| GSMUA_Achr6P27520_001 | Banana | plastid | 20.4 | 47.06 |
| GSMUA_Achr9P01380_001 | Banana | nucleus | 48.73 | 46.11 |
| GSMUA_Achr11P... | Banana | nucleus | 50.71 | 43.13 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 50.42 | 43.1 |
| GSMUA_Achr6P06030_001 | Banana | nucleus | 44.76 | 42.82 |
| Zm00001d006091_P001 | Maize | nucleus | 50.14 | 41.84 |
| GSMUA_Achr9P29330_001 | Banana | nucleus | 44.76 | 41.36 |
| HORVU0Hr1G039170.6 | Barley | nucleus | 46.46 | 41.0 |
| TraesCS7B01G158500.1 | Wheat | nucleus | 47.31 | 40.83 |
| TraesCS7A01G260500.1 | Wheat | nucleus | 46.74 | 40.54 |
| TraesCS7D01G261500.1 | Wheat | nucleus | 47.31 | 40.34 |
| TraesCS5B01G286000.1 | Wheat | nucleus | 48.44 | 39.49 |
| TraesCS5D01G294400.1 | Wheat | nucleus | 48.16 | 39.35 |
| TraesCS5A01G286700.2 | Wheat | nucleus | 48.44 | 39.22 |
| EER97011 | Sorghum | nucleus | 51.27 | 39.01 |
| Os08t0531600-01 | Rice | nucleus | 49.86 | 38.68 |
| Zm00001d049822_P001 | Maize | nucleus | 45.04 | 36.81 |
| Zm00001d049824_P002 | Maize | nucleus | 45.33 | 36.78 |
| Zm00001d021056_P001 | Maize | nucleus | 48.44 | 36.77 |
| KXG25534 | Sorghum | nucleus | 47.03 | 36.4 |
| Os09t0507100-00 | Rice | nucleus | 48.44 | 36.23 |
| Zm00001d012015_P001 | Maize | nucleus | 37.39 | 35.2 |
| HORVU5Hr1G076380.9 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 38.81 | 34.95 |
| VIT_14s0068g01780.t01 | Wine grape | nucleus | 36.54 | 34.13 |
| Os01t0922600-01 | Rice | nucleus | 29.75 | 33.76 |
| EES01979 | Sorghum | nucleus | 38.53 | 33.75 |
| Zm00001d042319_P001 | Maize | nucleus | 37.39 | 32.27 |
| TraesCS3A01G432500.1 | Wheat | nucleus | 36.54 | 31.08 |
| GSMUA_Achr1P08440_001 | Banana | nucleus | 16.43 | 31.02 |
| GSMUA_Achr4P23650_001 | Banana | nucleus | 16.43 | 31.02 |
| KRG94562 | Soybean | nucleus | 32.01 | 30.96 |
| TraesCS3B01G468400.1 | Wheat | nucleus | 36.26 | 30.92 |
| TraesCS3D01G425800.1 | Wheat | nucleus | 36.26 | 30.55 |
| HORVU3Hr1G094730.2 | Barley | nucleus | 36.83 | 30.3 |
| KRH06918 | Soybean | nucleus | 31.16 | 30.14 |
| GSMUA_Achr2P03070_001 | Banana | nucleus | 16.71 | 27.44 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 19.26 | 26.67 |
| GSMUA_Achr10P... | Banana | nucleus | 17.0 | 26.32 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 20.11 | 25.91 |
| GSMUA_Achr4P03880_001 | Banana | nucleus | 20.4 | 25.26 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 19.26 | 25.0 |
| GSMUA_Achr5P13440_001 | Banana | mitochondrion, nucleus | 19.55 | 23.71 |
| GSMUA_Achr9P22260_001 | Banana | nucleus | 22.66 | 23.32 |
| GSMUA_Achr9P27660_001 | Banana | nucleus | 23.8 | 22.76 |
| GSMUA_Achr7P20510_001 | Banana | nucleus | 21.81 | 22.58 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 21.81 | 22.25 |
| GSMUA_Achr4P26940_001 | Banana | nucleus | 21.81 | 22.19 |
| GSMUA_Achr8P25550_001 | Banana | nucleus | 21.25 | 21.8 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 19.55 | 21.7 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 21.25 | 21.68 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 19.83 | 21.34 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 26.35 | 21.23 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 26.35 | 20.48 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 20.11 | 20.29 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 24.65 | 20.09 |
| GSMUA_Achr6P22280_001 | Banana | nucleus | 23.23 | 19.95 |
| GSMUA_Achr9P20220_001 | Banana | nucleus | 13.88 | 19.92 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 19.83 | 19.77 |
| GSMUA_Achr4P01450_001 | Banana | nucleus | 19.83 | 19.61 |
| GSMUA_Achr3P11170_001 | Banana | nucleus | 21.25 | 19.33 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 24.93 | 19.21 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 24.65 | 18.75 |
| TraesCS4D01G332700.1 | Wheat | nucleus | 11.61 | 18.72 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 21.25 | 18.03 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 23.8 | 17.91 |
| GSMUA_Achr10P... | Banana | nucleus | 23.8 | 17.25 |
| GSMUA_Achr10P... | Banana | nucleus | 23.51 | 16.47 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 22.95 | 15.37 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 1.13 | 6.9 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_AchrUn_randomG05850_001 |
| EnsemblPlants:GSMUA_AchrUn_randomP05850_001 | EnsemblPlants:GSMUA_AchrUn_randomT05850_001 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:M0U6P6 | PFAM:PF03110 |
| PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF33 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
| UniParc:UPI0002961926 | SEG:seg | : | : | : | : |
Description
Putative Squamosa promoter-binding-like protein 16 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG05850_001]
Coordinates
chrchrUn_random:-:25281925..25294459
Molecular Weight (calculated)
39102.9 Da
IEP (calculated)
7.307
GRAVY (calculated)
-0.563
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWDLKMPPW NLEELGRDAE LSIGSVVVGS SGGGTCQSSG LDCSVDLKLG GLGDFGSSTE WNSHPAASMA MASQSAPSKR PRAPAHGVSC LVDGCNADLS
101: KCREYHRRHK VCEAHSKTPM VVLRGQQQRF CQQCSRFHLL EEFDEVKRSC RKRLDGHNRR RRKPQPSSVN SGIIFPGHQG FSACPQIFRT AELESNWTRT
201: VKTEDATPYT PSQFINHQHF PRSSYNFSKG RNQIPFIQDT KTAMDIKSTL QTSMFNNGLT QVFDSDCALS LLSSPTQTSD VSLSHMVPPA DRIPMGQPLV
301: SSLQYGRMED QHTGTFLVPD HANDVEINCQ NIYHSGCEGS SDATCQTLLF SWP
101: KCREYHRRHK VCEAHSKTPM VVLRGQQQRF CQQCSRFHLL EEFDEVKRSC RKRLDGHNRR RRKPQPSSVN SGIIFPGHQG FSACPQIFRT AELESNWTRT
201: VKTEDATPYT PSQFINHQHF PRSSYNFSKG RNQIPFIQDT KTAMDIKSTL QTSMFNNGLT QVFDSDCALS LLSSPTQTSD VSLSHMVPPA DRIPMGQPLV
301: SSLQYGRMED QHTGTFLVPD HANDVEINCQ NIYHSGCEGS SDATCQTLLF SWP
001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
Arabidopsis Description
SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.