Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G260500.1 | Wheat | nucleus | 96.14 | 97.79 |
| TraesCS7B01G158500.1 | Wheat | nucleus | 95.65 | 96.82 |
| HORVU0Hr1G039170.6 | Barley | nucleus | 90.34 | 93.5 |
| KXG25534 | Sorghum | nucleus | 74.4 | 67.54 |
| Zm00001d049822_P001 | Maize | nucleus | 67.87 | 65.05 |
| Zm00001d049824_P002 | Maize | nucleus | 67.39 | 64.14 |
| Os08t0531600-01 | Rice | nucleus | 68.6 | 62.42 |
| TraesCS5D01G294400.1 | Wheat | nucleus | 62.56 | 59.95 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.41 | 53.71 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.2 | 49.19 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 37.68 | 48.9 |
| GSMUA_AchrUn_... | Banana | nucleus | 40.34 | 47.31 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 45.89 | 46.0 |
| GSMUA_Achr11P... | Banana | nucleus | 42.75 | 42.65 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 35.51 | 40.83 |
| VIT_14s0068g01780.t01 | Wine grape | nucleus | 34.54 | 37.83 |
| TraesCS2D01G232800.1 | Wheat | nucleus | 16.43 | 35.42 |
| KRG94562 | Soybean | nucleus | 30.92 | 35.07 |
| TraesCS3D01G425800.1 | Wheat | nucleus | 34.78 | 34.37 |
| KRH06918 | Soybean | nucleus | 30.19 | 34.25 |
| TraesCS4D01G332700.1 | Wheat | nucleus | 17.39 | 32.88 |
| TraesCS6D01G145200.1 | Wheat | nucleus | 21.01 | 26.77 |
| TraesCS7D01G482300.1 | Wheat | nucleus | 19.81 | 25.87 |
| TraesCS2D01G410700.1 | Wheat | nucleus | 20.53 | 23.94 |
| TraesCS7D01G245200.2 | Wheat | nucleus | 21.01 | 22.6 |
| TraesCS7D01G482400.1 | Wheat | nucleus | 21.01 | 22.42 |
| TraesCS2D01G502900.2 | Wheat | nucleus | 21.5 | 21.87 |
| TraesCS5D01G273900.2 | Wheat | nucleus | 21.5 | 21.81 |
| TraesCS7D01G482500.1 | Wheat | nucleus | 21.74 | 21.63 |
| TraesCS7D01G482200.1 | Wheat | nucleus | 21.01 | 21.32 |
| TraesCS6D01G098500.1 | Wheat | nucleus | 21.98 | 19.24 |
| TraesCS6D01G142100.1 | Wheat | nucleus | 20.29 | 18.58 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 1.21 | 8.62 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G261500.1 | EnsemblPlantsGene:TraesCS7D01G261500 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR004333 |
| InterPro:IPR036893 | InterPro:SBP_dom | InterPro:SBP_sf | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF33 | PFAM:PF03110 |
| PFscan:PS51141 | SEG:seg | SUPFAM:SSF103612 | MapMan:15.5.18 | : | : |
Description
No Description!
Coordinates
chr7D:+:237410697..237415925
Molecular Weight (calculated)
43727.8 Da
IEP (calculated)
7.398
GRAVY (calculated)
-0.495
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWDLKMPPG AWDLAELESD AAAAPAAGGQ ASAGGIANAA GRQECSVDLK LGGLGECGAA PGSRGLGKAP AEAASSASAS APSAAKRPRA SSGGGGGSGS
101: GAGQQQCPSC AVDGCKADLS RCRDYHRRHK VCEAHSKTPV VTVAGREMRF CQQCSRFHLL TEFDEAKRSC RKRLDGHNRR RRKPQPDVMN SASFMTSQQG
201: TRFSSFPTPR PEQNWPGIIK TEENPYYAHQ LPLGISNRQH FGRSASTYAK EGRRFPFLQE GEINFATGVA LEPSVCQPLL KTVAPPDSSS SSSKMFSDGL
301: TPVLDSDCAL SLLSAPANSS GIDVGQMVQQ TEHIPIAQPL FSNLQFSSSS WFSRTQASTG TVSATGFSCP AVENEQLNNV LSSDNNDLNY NGIFHVGGEG
401: SSDGAPPSLP FPWQ
101: GAGQQQCPSC AVDGCKADLS RCRDYHRRHK VCEAHSKTPV VTVAGREMRF CQQCSRFHLL TEFDEAKRSC RKRLDGHNRR RRKPQPDVMN SASFMTSQQG
201: TRFSSFPTPR PEQNWPGIIK TEENPYYAHQ LPLGISNRQH FGRSASTYAK EGRRFPFLQE GEINFATGVA LEPSVCQPLL KTVAPPDSSS SSSKMFSDGL
301: TPVLDSDCAL SLLSAPANSS GIDVGQMVQQ TEHIPIAQPL FSNLQFSSSS WFSRTQASTG TVSATGFSCP AVENEQLNNV LSSDNNDLNY NGIFHVGGEG
401: SSDGAPPSLP FPWQ
001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
Arabidopsis Description
SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.