Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH06918 | Soybean | nucleus | 94.52 | 94.52 |
| GSMUA_Achr6P27520_001 | Banana | plastid | 18.63 | 44.44 |
| KRH21401 | Soybean | nucleus | 16.16 | 42.75 |
| KRH10909 | Soybean | nucleus | 15.89 | 42.03 |
| KRH20415 | Soybean | nucleus | 15.34 | 39.44 |
| KRH50085 | Soybean | nucleus | 15.62 | 39.04 |
| KRH28893 | Soybean | nucleus | 15.34 | 38.36 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 31.51 | 36.05 |
| KRH22367 | Soybean | nucleus | 15.34 | 35.44 |
| GSMUA_Achr2P06150_001 | Banana | nucleus | 37.26 | 34.61 |
| KRG88838 | Soybean | nucleus | 17.81 | 34.21 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.33 | 33.71 |
| KRH55227 | Soybean | nucleus | 16.71 | 32.97 |
| KRG88952 | Soybean | nucleus | 20.0 | 32.59 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.88 | 32.26 |
| GSMUA_Achr9P01380_001 | Banana | nucleus | 32.88 | 32.17 |
| KRH59812 | Soybean | nucleus | 34.25 | 32.05 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.96 | 32.01 |
| HORVU0Hr1G039170.6 | Barley | nucleus | 34.79 | 31.75 |
| GSMUA_Achr9P29330_001 | Banana | nucleus | 33.15 | 31.68 |
| KRH22053 | Soybean | nucleus | 16.16 | 31.55 |
| VIT_14s0068g01780.t01 | Wine grape | nucleus | 32.6 | 31.48 |
| GSMUA_Achr6P06030_001 | Banana | nucleus | 31.78 | 31.44 |
| KRH41121 | Soybean | nucleus | 33.97 | 31.31 |
| TraesCS7B01G158500.1 | Wheat | nucleus | 34.79 | 31.05 |
| KRH27270 | Soybean | nucleus | 15.89 | 31.02 |
| KRH63786 | Soybean | nucleus | 31.51 | 31.0 |
| TraesCS7D01G261500.1 | Wheat | nucleus | 35.07 | 30.92 |
| TraesCS7A01G260500.1 | Wheat | nucleus | 34.25 | 30.71 |
| Zm00001d006091_P001 | Maize | nucleus | 34.52 | 29.79 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 32.88 | 29.06 |
| Zm00001d049824_P002 | Maize | nucleus | 34.52 | 28.97 |
| Zm00001d049822_P001 | Maize | nucleus | 34.25 | 28.94 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 28.49 | 28.89 |
| KRH54164 | Soybean | nucleus | 32.6 | 28.74 |
| TraesCS5B01G286000.1 | Wheat | nucleus | 33.97 | 28.64 |
| TraesCS5A01G286700.2 | Wheat | nucleus | 33.97 | 28.44 |
| TraesCS5D01G294400.1 | Wheat | nucleus | 33.42 | 28.24 |
| EES01979 | Sorghum | nucleus | 30.68 | 27.79 |
| Zm00001d012015_P001 | Maize | nucleus | 28.49 | 27.73 |
| KXG25534 | Sorghum | nucleus | 34.52 | 27.63 |
| EER97011 | Sorghum | nucleus | 35.07 | 27.59 |
| Zm00001d021056_P001 | Maize | nucleus | 35.07 | 27.53 |
| Os01t0922600-01 | Rice | nucleus | 23.29 | 27.33 |
| GSMUA_Achr11P... | Banana | nucleus | 30.68 | 26.99 |
| Zm00001d042319_P001 | Maize | nucleus | 30.14 | 26.89 |
| Os09t0507100-00 | Rice | nucleus | 34.52 | 26.69 |
| Os08t0531600-01 | Rice | nucleus | 33.15 | 26.59 |
| HORVU5Hr1G076380.9 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 27.95 | 26.02 |
| TraesCS3A01G432500.1 | Wheat | nucleus | 29.04 | 25.54 |
| TraesCS3B01G468400.1 | Wheat | nucleus | 28.77 | 25.36 |
| TraesCS3D01G425800.1 | Wheat | nucleus | 29.04 | 25.3 |
| HORVU3Hr1G094730.2 | Barley | nucleus | 29.04 | 24.71 |
| KRG95361 | Soybean | nucleus | 22.74 | 23.12 |
| KRH75287 | Soybean | nucleus | 21.37 | 22.67 |
| KRH67040 | Soybean | nucleus | 22.74 | 22.62 |
| KRH38141 | Soybean | nucleus, plastid | 22.74 | 22.25 |
| KRH54739 | Soybean | nucleus | 23.01 | 22.11 |
| KRH71914 | Soybean | nucleus, plastid | 21.64 | 22.07 |
| KRH66613 | Soybean | nucleus | 20.55 | 21.93 |
| KRH48746 | Soybean | nucleus | 20.27 | 21.64 |
| KRH75288 | Soybean | nucleus | 16.99 | 21.6 |
| KRH48747 | Soybean | nucleus | 18.9 | 20.41 |
| KRH66611 | Soybean | nucleus | 18.63 | 20.24 |
| KRH03167 | Soybean | nucleus | 28.49 | 19.12 |
| KRH56776 | Soybean | nucleus | 28.22 | 18.76 |
| KRH63174 | Soybean | nucleus | 28.49 | 18.44 |
| KRG97402 | Soybean | nucleus | 21.37 | 18.01 |
| KRH31506 | Soybean | nucleus | 21.37 | 17.61 |
| KRH70968 | Soybean | nucleus | 22.47 | 17.01 |
| KRH75117 | Soybean | nucleus | 22.47 | 16.98 |
| KRH07602 | Soybean | nucleus | 9.04 | 15.28 |
| TraesCS4D01G332700.1 | Wheat | nucleus | 8.22 | 13.7 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 1.37 | 8.62 |
Protein Annotations
| EntrezGene:100798317 | MapMan:15.5.18 | Gene3D:4.10.1100.10 | EMBL:ACUP02011982 | EnsemblPlantsGene:GLYMA_19G094000 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0046872 | UniProt:I1N7U1 | InterPro:IPR004333 | InterPro:IPR036893 | EnsemblPlants:KRG94562 |
| ProteinID:KRG94562 | ProteinID:KRG94562.1 | ProteinID:KRG94563.1 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 |
| PANTHER:PTHR31251:SF29 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI0001D840EA | SEG:seg |
Description
hypothetical protein
Coordinates
chr19:-:33200811..33204470
Molecular Weight (calculated)
40403.5 Da
IEP (calculated)
7.859
GRAVY (calculated)
-0.767
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWDGKEFAW DPRGLELLAN GEGQKSEAAS VDLRLGGEKI APDVAKDTKE SKTVSSPSGS SKRSRLQNGS QNMCCSVDGC NSDLSDCRDY HRRHRVCEKH
101: SKTPVVLVGG KQQRFCQQCS RFHSLGEFDE VKRSCRKRLD GHNRRRRKPQ PPSLFMAAEK FMYNYKGPRI LHFGSPEAYA NPIMRNMWPA AAKTGAESGY
201: DPPRLLYRID KHKQDKGHPL WQENDPKVGS GDEAMPGTPI CQPIHGTIAP STGGKSTRKL STDAKPGSFD SGCALYLLST LQSQSPELSM AQSSITCPMQ
301: SPSGSVHFDA VNEYSCSETE KDKPSGQVLV FDANTTNLHY NGMLQMGLDG LVENEDPLTL PFLWE
101: SKTPVVLVGG KQQRFCQQCS RFHSLGEFDE VKRSCRKRLD GHNRRRRKPQ PPSLFMAAEK FMYNYKGPRI LHFGSPEAYA NPIMRNMWPA AAKTGAESGY
201: DPPRLLYRID KHKQDKGHPL WQENDPKVGS GDEAMPGTPI CQPIHGTIAP STGGKSTRKL STDAKPGSFD SGCALYLLST LQSQSPELSM AQSSITCPMQ
301: SPSGSVHFDA VNEYSCSETE KDKPSGQVLV FDANTTNLHY NGMLQMGLDG LVENEDPLTL PFLWE
001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
Arabidopsis Description
SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.