CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70968	Soybean	nucleus	91.1	91.29
KRH21401	Soybean	nucleus	12.42	43.48
KRH10909	Soybean	nucleus	12.42	43.48
Bra004363.1-P	Field mustard	nucleus	25.88	41.53
CDX95958	Canola	nucleus	25.67	41.47
CDX96251	Canola	nucleus	28.16	41.46
Bra038324.1-P	Field mustard	nucleus	27.95	41.41
CDY50300	Canola	nucleus	27.95	41.16
CDY69014	Canola	nucleus	26.92	40.75
CDX81606	Canola	nucleus	27.95	40.54
KRH20415	Soybean	nucleus	11.8	40.14
KRH50085	Soybean	nucleus	11.8	39.04
AT1G69170.1	Thale cress	nucleus	31.68	37.78
KRH22367	Soybean	nucleus	12.01	36.71
KRH28893	Soybean	nucleus	10.77	35.62
KRH55227	Soybean	nucleus	13.04	34.05
KRG88838	Soybean	nucleus	13.04	33.16
KRH27270	Soybean	nucleus	12.84	33.16
KRH22053	Soybean	nucleus	12.63	32.62
KRG88952	Soybean	nucleus	14.91	32.14
PGSC0003DMT400072745	Potato	nucleus	33.33	28.85
Solyc05g012040.2.1	Tomato	nucleus	33.13	28.67
KRH54739	Soybean	nucleus	22.36	28.42
KRH56776	Soybean	nucleus	28.99	25.5
KRH38141	Soybean	nucleus, plastid	19.46	25.2
KRH71914	Soybean	nucleus, plastid	18.63	25.14
KRG95361	Soybean	nucleus	18.63	25.07
KRH03167	Soybean	nucleus	28.16	25.0
KRH59812	Soybean	nucleus	20.08	24.87
KRH63174	Soybean	nucleus	28.99	24.82
KRH41121	Soybean	nucleus	20.29	24.75
KRH75288	Soybean	nucleus	14.29	24.04
KRH75287	Soybean	nucleus	16.98	23.84
KRH67040	Soybean	nucleus	18.01	23.71
KRH66611	Soybean	nucleus	16.36	23.51
KRH63786	Soybean	nucleus	18.01	23.45
KRH54164	Soybean	nucleus	20.08	23.43
KRH48747	Soybean	nucleus	16.15	23.08
KRH06918	Soybean	nucleus	17.18	22.74
VIT_01s0011g00130.t01	Wine grape	nucleus	23.81	22.68
KRG94562	Soybean	nucleus	16.98	22.47
KRH66613	Soybean	nucleus	15.73	22.22
KRH48746	Soybean	nucleus	15.32	21.64
KRG97402	Soybean	nucleus	18.63	20.79
KRH31506	Soybean	nucleus	19.05	20.77
KRH07602	Soybean	nucleus	8.7	19.44

Protein Annotations

EntrezGene:100797372	MapMan:15.5.18	Gene3D:4.10.1100.10	UniProt:A0A0R0L7L1	EMBL:ACUP02000123	EnsemblPlantsGene:GLYMA_01G063700
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0046872	InterPro:IPR004333	InterPro:IPR036893	EnsemblPlants:KRH75117
ProteinID:KRH75117	ProteinID:KRH75117.1	ProteinID:KRH75118.1	ProteinID:KRH75119.1	PFAM:PF03110	PFscan:PS51141
PANTHER:PTHR31251	PANTHER:PTHR31251:SF22	InterPro:SBP_dom	InterPro:SBP_sf	SUPFAM:SSF103612	UniParc:UPI0003DEAA1D
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:9099890..9104330

Molecular Weight (calculated)

54351.5 Da

IEP (calculated)

7.092

GRAVY (calculated)

-0.630

Length

483 amino acids

Sequence
(BLAST)

001: MESWSYVPEE KGYLFSDEME FSLDAFMRSR KALVEWDNKS NFVERDGFNS DREVVKSMEF VDLGFPDLLQ KSFHGSLPLE TSSYELDSNN SSKRGNSSTH
101: VIALDSSMGE EESNSKHLSS LVESKTQDSS LIDLKLGRLA DCKGASSDKV EKEGFTLTSI HPTTLSKRAR TSSLPAQAPV CQVYGCNMDL SSSKDYHKRH
201: KVCDAHSKTA KVIVNGIEQR FCQQCSRFHL LVEFDDGKRS CRRRLAGHNE RRRKPQFDYM TGKQHKILQS YQAGTKYLGS SLQNKPMFPF QDIFQSSILF
301: PGKHAQISQS GRVKLEEDSI YSSQLTAPIT LDQESSSCAL SLLSDQSQYL SHHAACNPLT SHRVFSGICI PNRDGQISET PLRISSADKH APNESFPCNT
401: TSKEVIKNRS AATFSNTGHA LRVHHGDDIC QPSELLDVKH HFSSEHAATV DLFQLSSHLQ RVEQQRNSVL VKWENEDYCF PTV

Best Arabidopsis Sequence Match ( AT1G69170.1 )
(BLAST)

001: MDSWSYGRSV FMSNETLLPC DTFAKNRRFE QRLSNNDDVL ISDMAGNSNG FSAVSITKVV PEEEDEENIS SSSKFSSQEL NRIDFKLRSF LDLGNDDDDT
101: SSRGFALPSK KSRASNLCSQ NPLCQVYGCS KDLSSSKDYH KRHRVCEAHS KTSVVIVNGL EQRFCQQCSR FHFLSEFDDG KRSCRRRLAG HNERRRKPAF
201: YFLPGKRHKL LRTSQDVVGN KFLENSSLVL PESFPGSLLY RVIDEDDHRT SRLVSFKDEP TCSMFPTNEQ NSSRTYESKP AIYSTEVSSI WDLHETAASR
301: STRALSLLSA QSQQHLSKFP NTTFSITQPN QNLNHSSSTD YHQMEQPLWI DPGKTNSAGS SSCKGKGTST VDLLQLSSHL QRIEQQRNYT GDVKQEYNEL
401: YFPGS

Arabidopsis Description

SPL6Squamosa promoter-binding-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q94JW8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.