Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH63174 | Soybean | nucleus | 87.11 | 58.69 |
| KRH56776 | Soybean | nucleus | 69.74 | 48.27 |
| KRH03167 | Soybean | nucleus | 66.58 | 46.51 |
| VIT_17s0000g05020.t01 | Wine grape | nucleus | 61.05 | 41.65 |
| KRH21401 | Soybean | nucleus | 14.47 | 39.86 |
| KRH10909 | Soybean | nucleus | 13.95 | 38.41 |
| Solyc12g038520.1.1 | Tomato | nucleus | 44.74 | 38.03 |
| KRH20415 | Soybean | nucleus | 14.21 | 38.03 |
| PGSC0003DMT400059813 | Potato | nucleus | 44.47 | 37.06 |
| KRH50085 | Soybean | nucleus | 13.95 | 36.3 |
| KRH28893 | Soybean | nucleus | 13.95 | 36.3 |
| KRH22367 | Soybean | nucleus | 14.21 | 34.18 |
| KRG88952 | Soybean | nucleus | 19.47 | 33.04 |
| KRG88838 | Soybean | nucleus | 16.05 | 32.11 |
| KRH55227 | Soybean | nucleus | 15.53 | 31.89 |
| KRH27270 | Soybean | nucleus | 15.53 | 31.55 |
| KRH22053 | Soybean | nucleus | 15.26 | 31.02 |
| CDX95958 | Canola | nucleus | 22.37 | 28.43 |
| Solyc03g114850.2.1 | Tomato | nucleus | 19.47 | 27.92 |
| Bra004363.1-P | Field mustard | nucleus | 22.11 | 27.91 |
| CDY69014 | Canola | nucleus | 22.89 | 27.27 |
| Bra038324.1-P | Field mustard | nucleus | 22.37 | 26.07 |
| CDY50300 | Canola | nucleus | 22.37 | 25.91 |
| CDX96251 | Canola | nucleus | 22.11 | 25.61 |
| CDX81606 | Canola | nucleus | 22.11 | 25.23 |
| KRH63786 | Soybean | nucleus | 23.16 | 23.72 |
| AT1G69170.1 | Thale cress | nucleus | 25.26 | 23.7 |
| KRG94562 | Soybean | nucleus | 22.11 | 23.01 |
| KRH70968 | Soybean | nucleus | 28.95 | 22.82 |
| KRH06918 | Soybean | nucleus | 21.84 | 22.74 |
| KRH59812 | Soybean | nucleus | 23.16 | 22.56 |
| KRH41121 | Soybean | nucleus | 23.42 | 22.47 |
| KRH75117 | Soybean | nucleus | 28.42 | 22.36 |
| KRH75288 | Soybean | nucleus | 16.84 | 22.3 |
| KRH75287 | Soybean | nucleus | 19.74 | 21.8 |
| KRH38141 | Soybean | nucleus, plastid | 21.32 | 21.72 |
| KRH48746 | Soybean | nucleus | 19.47 | 21.64 |
| KRH71914 | Soybean | nucleus, plastid | 20.26 | 21.51 |
| KRG95361 | Soybean | nucleus | 20.26 | 21.45 |
| KRH66613 | Soybean | nucleus | 19.21 | 21.34 |
| KRH48747 | Soybean | nucleus | 18.95 | 21.3 |
| KRH66611 | Soybean | nucleus | 18.68 | 21.13 |
| KRH54164 | Soybean | nucleus | 22.89 | 21.01 |
| KRH67040 | Soybean | nucleus | 19.74 | 20.44 |
| PGSC0003DMT400063046 | Potato | nucleus | 25.0 | 18.41 |
| KRG97402 | Soybean | nucleus | 20.0 | 17.55 |
| KRH31506 | Soybean | nucleus | 20.0 | 17.16 |
| KRH07602 | Soybean | nucleus | 9.21 | 16.2 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | EMBL:ACUP02003574 | EnsemblPlantsGene:GLYMA_06G205700 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0046872 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:K7KW87 | EnsemblPlants:KRH54739 | ProteinID:KRH54739 |
| ProteinID:KRH54739.1 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF22 | InterPro:SBP_dom |
| InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI0002948418 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr6:-:19467558..19470333
Molecular Weight (calculated)
41861.0 Da
IEP (calculated)
7.959
GRAVY (calculated)
-0.595
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: EDFNSKLSNS LGDSNGGNSL IDLKLGRFDD HGDAMVPTFS KGAPILSLLE SSTPPKRVRA LGAHSQTAYC QVYGCNKDLS GCKDYHKGHK VCEVHSKTYK
101: VIVNGIEQRF CQQCSRFHLL AEFDDGKRSC RKCLAGHNER RRKPQVGIHS GKAGRLLQLY PDLSKPEDNT SFTFRPLSSI PITNGHPQSR SLFPSYSEKQ
201: VPLLHKNGAT SATGNVFSEN NNQYHPPSLG GQSSGSQSLF QDTSLGSEDF NVFNTESAVQ GLSQSSGIPM ARPMVIPSSH SHYSMNQVSE KMMGISSQAS
301: NKVFDRFPPE FNPVDGRHLR PILISDNNEI FNFEMADGIF QGSDFVNVKD HLSCEDGLTF DSFQLSSPLQ RVSNRGSSCR
101: VIVNGIEQRF CQQCSRFHLL AEFDDGKRSC RKCLAGHNER RRKPQVGIHS GKAGRLLQLY PDLSKPEDNT SFTFRPLSSI PITNGHPQSR SLFPSYSEKQ
201: VPLLHKNGAT SATGNVFSEN NNQYHPPSLG GQSSGSQSLF QDTSLGSEDF NVFNTESAVQ GLSQSSGIPM ARPMVIPSSH SHYSMNQVSE KMMGISSQAS
301: NKVFDRFPPE FNPVDGRHLR PILISDNNEI FNFEMADGIF QGSDFVNVKD HLSCEDGLTF DSFQLSSPLQ RVSNRGSSCR
001: MDSWSYGRSV FMSNETLLPC DTFAKNRRFE QRLSNNDDVL ISDMAGNSNG FSAVSITKVV PEEEDEENIS SSSKFSSQEL NRIDFKLRSF LDLGNDDDDT
101: SSRGFALPSK KSRASNLCSQ NPLCQVYGCS KDLSSSKDYH KRHRVCEAHS KTSVVIVNGL EQRFCQQCSR FHFLSEFDDG KRSCRRRLAG HNERRRKPAF
201: YFLPGKRHKL LRTSQDVVGN KFLENSSLVL PESFPGSLLY RVIDEDDHRT SRLVSFKDEP TCSMFPTNEQ NSSRTYESKP AIYSTEVSSI WDLHETAASR
301: STRALSLLSA QSQQHLSKFP NTTFSITQPN QNLNHSSSTD YHQMEQPLWI DPGKTNSAGS SSCKGKGTST VDLLQLSSHL QRIEQQRNYT GDVKQEYNEL
401: YFPGS
101: SSRGFALPSK KSRASNLCSQ NPLCQVYGCS KDLSSSKDYH KRHRVCEAHS KTSVVIVNGL EQRFCQQCSR FHFLSEFDDG KRSCRRRLAG HNERRRKPAF
201: YFLPGKRHKL LRTSQDVVGN KFLENSSLVL PESFPGSLLY RVIDEDDHRT SRLVSFKDEP TCSMFPTNEQ NSSRTYESKP AIYSTEVSSI WDLHETAASR
301: STRALSLLSA QSQQHLSKFP NTTFSITQPN QNLNHSSSTD YHQMEQPLWI DPGKTNSAGS SSCKGKGTST VDLLQLSSHL QRIEQQRNYT GDVKQEYNEL
401: YFPGS
Arabidopsis Description
SPL6Squamosa promoter-binding-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q94JW8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.