Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH41121 | Soybean | nucleus | 90.51 | 89.14 |
| KRH63786 | Soybean | nucleus | 61.54 | 64.69 |
| KRH54164 | Soybean | nucleus | 64.62 | 60.87 |
| KRH21401 | Soybean | nucleus | 15.9 | 44.93 |
| KRH10909 | Soybean | nucleus | 15.9 | 44.93 |
| AT5G50670.2 | Thale cress | nucleus | 41.03 | 44.57 |
| AT5G50570.2 | Thale cress | nucleus | 41.03 | 44.57 |
| Solyc05g015840.2.1 | Tomato | nucleus | 34.62 | 43.27 |
| CDX84872 | Canola | nucleus | 37.69 | 43.11 |
| CDY45826 | Canola | nucleus | 37.69 | 43.11 |
| CDY34028 | Canola | nucleus | 38.46 | 43.1 |
| Bra022766.1-P | Field mustard | nucleus | 37.69 | 42.98 |
| PGSC0003DMT400056374 | Potato | nucleus | 35.13 | 42.95 |
| CDX71667 | Canola | nucleus | 38.72 | 42.06 |
| KRH20415 | Soybean | nucleus | 15.13 | 41.55 |
| KRH50085 | Soybean | nucleus | 15.13 | 40.41 |
| KRG94562 | Soybean | nucleus | 32.05 | 34.25 |
| KRH06918 | Soybean | nucleus | 32.05 | 34.25 |
| KRH22367 | Soybean | nucleus | 13.59 | 33.54 |
| KRH55227 | Soybean | nucleus | 15.9 | 33.51 |
| KRH28893 | Soybean | nucleus | 12.31 | 32.88 |
| KRG88838 | Soybean | nucleus | 15.64 | 32.11 |
| KRG88952 | Soybean | nucleus | 18.21 | 31.7 |
| KRH27270 | Soybean | nucleus | 14.87 | 31.02 |
| KRH22053 | Soybean | nucleus | 14.62 | 30.48 |
| KRH71914 | Soybean | nucleus, plastid | 22.56 | 24.58 |
| KRH38141 | Soybean | nucleus, plastid | 22.82 | 23.86 |
| KRH67040 | Soybean | nucleus | 22.05 | 23.43 |
| KRH54739 | Soybean | nucleus | 22.56 | 23.16 |
| KRG95361 | Soybean | nucleus | 21.28 | 23.12 |
| KRH66611 | Soybean | nucleus | 19.74 | 22.92 |
| KRH48747 | Soybean | nucleus | 19.74 | 22.78 |
| KRH75287 | Soybean | nucleus | 20.0 | 22.67 |
| KRH75288 | Soybean | nucleus | 16.67 | 22.65 |
| KRG97402 | Soybean | nucleus | 24.62 | 22.17 |
| KRH31506 | Soybean | nucleus | 24.62 | 21.67 |
| KRH66613 | Soybean | nucleus | 18.21 | 20.76 |
| KRH48746 | Soybean | nucleus | 17.95 | 20.47 |
| KRH70968 | Soybean | nucleus | 24.87 | 20.12 |
| KRH75117 | Soybean | nucleus | 24.87 | 20.08 |
| KRH03167 | Soybean | nucleus | 26.41 | 18.93 |
| KRH63174 | Soybean | nucleus | 26.67 | 18.44 |
| KRH56776 | Soybean | nucleus | 25.9 | 18.4 |
| KRH07602 | Soybean | nucleus | 8.97 | 16.2 |
Protein Annotations
| EntrezGene:100806507 | MapMan:15.5.18 | Gene3D:4.10.1100.10 | EMBL:ACUP02003342 | EnsemblPlantsGene:GLYMA_05G204100 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0046872 | UniProt:I1K6N7 | InterPro:IPR004333 | InterPro:IPR036893 | EnsemblPlants:KRH59812 |
| ProteinID:KRH59812 | ProteinID:KRH59812.1 | ProteinID:KRH59813.1 | ProteinID:KRH59814.1 | ProteinID:KRH59815.1 | ProteinID:KRH59816.1 |
| ProteinID:KRH59817.1 | ProteinID:KRH59818.1 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF29 |
| InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI00023399E5 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr5:+:38767835..38772912
Molecular Weight (calculated)
42731.9 Da
IEP (calculated)
8.342
GRAVY (calculated)
-0.676
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWNLKALSW DLSEVDQANL PNMETMEGSS RYGMYRTKGE FSVDLKLGQV GNSGTESVLT KSKDAVGVSK MTSSSTSGSS KRARALSNGT QTVSCLVDGC
101: HADLSNCRDY HRRHKVCEVH SKTAQVSIGG QKQRFCQQCS RFHSLEEFDE GKRSCRKRLD GHNRRRRKPQ PESLTRSGSF LSNYQGTQLL PFSSSHEYPS
201: TTVVNPTWGG VLTTSGDVRL HGHNQHHHQV HLADKQDLFL GSSPAGYKEG KQLAFMQGDH TLNNRSPHLP GASVGQAQMF LRTSLYSESD GLRCKMFCDS
301: LTSSIQDNNT SRALSLLSSP PQPLSPGNGL NLMVNSHSPL MQPLGLSLHD NSLGSVDPVL GPNDSSSMYN IGSNGSQGNE APPLFPFQWE
101: HADLSNCRDY HRRHKVCEVH SKTAQVSIGG QKQRFCQQCS RFHSLEEFDE GKRSCRKRLD GHNRRRRKPQ PESLTRSGSF LSNYQGTQLL PFSSSHEYPS
201: TTVVNPTWGG VLTTSGDVRL HGHNQHHHQV HLADKQDLFL GSSPAGYKEG KQLAFMQGDH TLNNRSPHLP GASVGQAQMF LRTSLYSESD GLRCKMFCDS
301: LTSSIQDNNT SRALSLLSSP PQPLSPGNGL NLMVNSHSPL MQPLGLSLHD NSLGSVDPVL GPNDSSSMYN IGSNGSQGNE APPLFPFQWE
001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
Arabidopsis Description
SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.