Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH50085 | Soybean | nucleus | 88.73 | 86.3 |
| KRH21401 | Soybean | nucleus | 70.42 | 72.46 |
| KRH10909 | Soybean | nucleus | 69.72 | 71.74 |
| VIT_10s0003g00050.t01 | Wine grape | nucleus | 50.0 | 50.71 |
| Solyc02g077920.2.1 | Tomato | nucleus | 47.89 | 50.0 |
| PGSC0003DMT400076399 | Potato | nucleus | 47.18 | 49.26 |
| Solyc10g009080.2.1 | Tomato | nucleus | 46.48 | 48.89 |
| AT2G33810.1 | Thale cress | nucleus | 45.07 | 48.85 |
| PGSC0003DMT400058753 | Potato | nucleus | 45.77 | 48.15 |
| Bra005470.1-P | Field mustard | nucleus | 46.48 | 46.48 |
| CDY57212 | Canola | nucleus | 45.07 | 45.39 |
| CDY17204 | Canola | nucleus | 45.07 | 45.07 |
| CDY27935 | Canola | nucleus | 46.48 | 44.9 |
| Bra021880.1-P | Field mustard | nucleus | 44.37 | 44.68 |
| CDY37684 | Canola | nucleus | 44.37 | 44.68 |
| CDY50515 | Canola | nucleus | 44.37 | 40.13 |
| CDY24113 | Canola | nucleus | 45.07 | 39.75 |
| KRH28893 | Soybean | nucleus | 38.03 | 36.99 |
| CDY25876 | Canola | nucleus | 45.77 | 36.93 |
| Bra038101.1-P | Field mustard | nucleus | 46.48 | 36.07 |
| KRH55227 | Soybean | nucleus | 46.48 | 35.68 |
| Bra039656.1-P | Field mustard | nucleus | 45.07 | 35.56 |
| KRG88838 | Soybean | nucleus | 47.18 | 35.26 |
| CDY61210 | Canola | nucleus | 44.37 | 35.2 |
| Bra027265.1-P | Field mustard | nucleus | 44.37 | 35.2 |
| CDX97645 | Canola | nucleus | 44.37 | 35.2 |
| KRH22367 | Soybean | nucleus | 38.73 | 34.81 |
| KRH22053 | Soybean | nucleus | 45.77 | 34.76 |
| CDX98540 | Canola | nucleus | 43.66 | 34.64 |
| AT1G53160.1 | Thale cress | nucleus | 42.25 | 34.48 |
| KRH27270 | Soybean | nucleus | 44.37 | 33.69 |
| CDX79544 | Canola | nucleus | 43.66 | 33.16 |
| Bra021094.1-P | Field mustard | nucleus | 40.85 | 32.95 |
| CDY20128 | Canola | nucleus | 40.14 | 32.39 |
| CDY32310 | Canola | nucleus | 40.14 | 32.39 |
| AT3G15270.1 | Thale cress | nucleus | 40.85 | 32.04 |
| Os07t0505200-01 | Rice | nucleus | 45.77 | 30.09 |
| EER97257 | Sorghum | nucleus | 44.37 | 29.3 |
| Zm00001d021573_P001 | Maize | mitochondrion | 40.14 | 27.67 |
| KRG88952 | Soybean | nucleus | 41.55 | 26.34 |
| KXG36284 | Sorghum | nucleus | 40.14 | 26.15 |
| Zm00001d006451_P001 | Maize | mitochondrion | 44.37 | 24.8 |
| KRH75288 | Soybean | nucleus | 43.66 | 21.6 |
| KRH66611 | Soybean | nucleus | 47.89 | 20.24 |
| KRH48747 | Soybean | nucleus | 47.89 | 20.12 |
| KRH07602 | Soybean | nucleus | 28.17 | 18.52 |
| KRH48746 | Soybean | nucleus | 42.96 | 17.84 |
| KRH66613 | Soybean | nucleus | 42.96 | 17.84 |
| KRH75287 | Soybean | nucleus | 42.96 | 17.73 |
| KRH71914 | Soybean | nucleus, plastid | 42.96 | 17.04 |
| KRG95361 | Soybean | nucleus | 42.96 | 16.99 |
| KRH38141 | Soybean | nucleus, plastid | 43.66 | 16.62 |
| KRH67040 | Soybean | nucleus | 42.25 | 16.35 |
| KRH06918 | Soybean | nucleus | 40.14 | 15.62 |
| KRG94562 | Soybean | nucleus | 39.44 | 15.34 |
| KRH59812 | Soybean | nucleus | 41.55 | 15.13 |
| KRH41121 | Soybean | nucleus | 41.55 | 14.9 |
| KRH54164 | Soybean | nucleus | 42.96 | 14.73 |
| KRH63786 | Soybean | nucleus | 38.03 | 14.56 |
| KRH54739 | Soybean | nucleus | 38.03 | 14.21 |
| KRG97402 | Soybean | nucleus | 41.55 | 13.63 |
| KRH31506 | Soybean | nucleus | 40.85 | 13.09 |
| KRH70968 | Soybean | nucleus | 40.14 | 11.83 |
| KRH75117 | Soybean | nucleus | 40.14 | 11.8 |
| KRH56776 | Soybean | nucleus | 40.85 | 10.56 |
| KRH03167 | Soybean | nucleus | 40.14 | 10.48 |
| KRH63174 | Soybean | nucleus | 39.44 | 9.93 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | EMBL:ACUP02008262 | EnsemblPlantsGene:GLYMA_13G177400 | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 |
| GO:GO:0046872 | UniProt:I1M086 | InterPro:IPR004333 | InterPro:IPR036893 | EnsemblPlants:KRH20415 | ProteinID:KRH20415 |
| ProteinID:KRH20415.1 | PFAM:PF03110 | PIRSF:PIRSF037575 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF64 |
| InterPro:SBP_dom | InterPro:SBP_fam | InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI00023CF29A | SEG:seg |
Description
hypothetical protein
Coordinates
chr13:-:29139322..29141530
Molecular Weight (calculated)
16551.1 Da
IEP (calculated)
7.087
GRAVY (calculated)
-1.330
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTSRSEGKR VMRYKEEDDD NDDEEEEEVV SEMGFEEDGR RNKRVIRDLY GKRGSKGGGS ITPSCQVDNC DADLSEAKQY HRRHKVCEYH AKAPSVHMAG
101: LQQRFCQQCS RFHVLSEFDD SKRSCRTRLA GHNERRRKYA VD
101: LQQRFCQQCS RFHVLSEFDD SKRSCRTRLA GHNERRRKYA VD
001: MSMRRSKAEG KRSLRELSEE EEEEEETEDE DTFEEEEALE KKQKGKATSS SGVCQVESCT ADMSKAKQYH KRHKVCQFHA KAPHVRISGL HQRFCQQCSR
101: FHALSEFDEA KRSCRRRLAG HNERRRKSTT D
101: FHALSEFDEA KRSCRRRLAG HNERRRKSTT D
Arabidopsis Description
SPL3Squamosa promoter-binding-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P93015]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.