Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038101.1-P | Field mustard | nucleus | 98.86 | 95.08 |
| CDY50515 | Canola | nucleus | 78.98 | 88.53 |
| CDY24113 | Canola | nucleus | 77.84 | 85.09 |
| CDY61210 | Canola | nucleus | 85.23 | 83.8 |
| AT1G53160.1 | Thale cress | nucleus | 75.57 | 76.44 |
| CDX98540 | Canola | nucleus | 69.32 | 68.16 |
| CDX97645 | Canola | nucleus | 69.32 | 68.16 |
| CDY32310 | Canola | nucleus | 64.2 | 64.2 |
| CDY20128 | Canola | nucleus | 64.2 | 64.2 |
| VIT_10s0003g00050.t01 | Wine grape | nucleus | 43.18 | 54.29 |
| CDY27935 | Canola | nucleus | 44.89 | 53.74 |
| CDY17204 | Canola | nucleus | 43.18 | 53.52 |
| Solyc10g009080.2.1 | Tomato | nucleus | 40.91 | 53.33 |
| PGSC0003DMT400058753 | Potato | nucleus | 40.34 | 52.59 |
| PGSC0003DMT400076399 | Potato | nucleus | 39.2 | 50.74 |
| Solyc02g077920.2.1 | Tomato | nucleus | 38.64 | 50.0 |
| CDY57212 | Canola | nucleus | 38.07 | 47.52 |
| CDY37684 | Canola | nucleus | 37.5 | 46.81 |
| KRH20415 | Soybean | nucleus | 36.93 | 45.77 |
| KRH50085 | Soybean | nucleus | 37.5 | 45.21 |
| KRH10909 | Soybean | nucleus | 35.23 | 44.93 |
| KRH21401 | Soybean | nucleus | 35.23 | 44.93 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 14.77 | 44.83 |
| CDX79544 | Canola | nucleus | 39.2 | 36.9 |
| Os07t0505200-01 | Rice | nucleus | 38.07 | 31.02 |
| EER97257 | Sorghum | nucleus | 36.36 | 29.77 |
| Zm00001d021573_P001 | Maize | mitochondrion | 31.25 | 26.7 |
| KXG36284 | Sorghum | nucleus | 32.39 | 26.15 |
| Zm00001d006451_P001 | Maize | mitochondrion | 37.5 | 25.98 |
| CDX95958 | Canola | nucleus | 31.82 | 18.73 |
| CDY61750 | Canola | nucleus | 32.39 | 18.51 |
| CDX98259 | Canola | nucleus | 34.09 | 18.46 |
| CDX90071 | Canola | nucleus | 31.82 | 17.95 |
| CDY47656 | Canola | nucleus | 32.95 | 17.9 |
| CDY50300 | Canola | nucleus | 31.82 | 17.07 |
| CDY38043 | Canola | nucleus | 32.39 | 17.01 |
| CDY69014 | Canola | nucleus | 30.68 | 16.93 |
| CDX67715 | Canola | nucleus | 30.11 | 16.77 |
| CDX96251 | Canola | nucleus | 31.25 | 16.77 |
| CDY14818 | Canola | nucleus | 34.09 | 16.35 |
| CDX79888 | Canola | nucleus | 34.09 | 16.3 |
| CDY06881 | Canola | nucleus | 33.52 | 16.25 |
| CDX81606 | Canola | nucleus | 30.68 | 16.22 |
| CDY53504 | Canola | nucleus | 34.09 | 16.22 |
| CDX71667 | Canola | nucleus | 32.39 | 15.88 |
| CDY45826 | Canola | nucleus | 30.68 | 15.84 |
| CDX84872 | Canola | nucleus | 30.11 | 15.54 |
| CDY34028 | Canola | nucleus | 30.68 | 15.52 |
| CDY15132 | Canola | nucleus | 19.89 | 15.02 |
| CDY27612 | Canola | nucleus | 26.7 | 14.29 |
| CDY67700 | Canola | nucleus | 27.27 | 13.87 |
| CDY03913 | Canola | nucleus | 28.98 | 13.75 |
| CDX84928 | Canola | nucleus | 27.84 | 13.46 |
| CDY27611 | Canola | nucleus | 27.84 | 13.42 |
| CDX84927 | Canola | nucleus | 27.84 | 13.35 |
| CDY15713 | Canola | nucleus | 29.55 | 13.33 |
| CDY32959 | Canola | nucleus | 29.55 | 13.33 |
| CDY43604 | Canola | nucleus | 28.98 | 13.25 |
| CDY15712 | Canola | nucleus | 27.84 | 13.1 |
| CDY03914 | Canola | nucleus | 27.27 | 12.9 |
| CDY11816 | Canola | nucleus | 26.7 | 12.88 |
| CDY22356 | Canola | nucleus | 30.68 | 10.4 |
| CDY47812 | Canola | nucleus | 30.11 | 10.27 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:A0A078GKE9 | UniProt:A0A078GKE9 | EnsemblPlants:CDY25876 | ProteinID:CDY25876 |
| ProteinID:CDY25876.1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00033324001 | InterPro:IPR004333 |
| InterPro:IPR036893 | PFAM:PF03110 | PIRSF:PIRSF037575 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF64 |
| InterPro:SBP_dom | InterPro:SBP_fam | InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI0004EE9523 | SEG:seg |
Description
BnaA05g14670DSquamosa promoter-binding-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078GKE9]
Coordinates
chrLK032181:-:435204..435825
Molecular Weight (calculated)
20189.9 Da
IEP (calculated)
10.291
GRAVY (calculated)
-1.177
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGKKAQGLG YLKKKAPMST YHADEELEND TDGEEERKGV MDRFKGSSSN RVSSRLCQVD RCTTDLKEAK QYHRRHKVCE VHAKASSVYL AGVKQRFCQQ
101: CSRFHELPEF DEAKRSCRRR LAGHNERRRK SSGESFGEGA GGRRGVTSQV MQNQERSRVE MTLPMSNSSF KRPQIR
101: CSRFHELPEF DEAKRSCRRR LAGHNERRRK SSGESFGEGA GGRRGVTSQV MQNQERSRVE MTLPMSNSSF KRPQIR
001: MEGQRTQRRG YLKDKATVSN LVEEEMENGM DGEEEDGGDE DKRKKVMERV RGPSTDRVPS RLCQVDRCTV NLTEAKQYYR RHRVCEVHAK ASAATVAGVR
101: QRFCQQCSRF HELPEFDEAK RSCRRRLAGH NERRRKISGD SFGEGSGRRG FSGQLIQTQE RNRVDRKLPM TNSSFKRPQI R
101: QRFCQQCSRF HELPEFDEAK RSCRRRLAGH NERRRKISGD SFGEGSGRRG FSGQLIQTQE RNRVDRKLPM TNSSFKRPQI R
Arabidopsis Description
SPL5SPL5 [Source:UniProtKB/TrEMBL;Acc:A0A178VL13]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.