Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22356 | Canola | nucleus | 93.8 | 93.26 |
| CDY32959 | Canola | nucleus | 62.79 | 83.08 |
| AT5G43270.1 | Thale cress | nucleus | 67.25 | 82.82 |
| CDY43604 | Canola | nucleus | 61.05 | 81.82 |
| Os02t0139400-01 | Rice | nucleus | 24.42 | 44.68 |
| VIT_01s0010g03710.t01 | Wine grape | nucleus | 38.76 | 41.93 |
| CDY17204 | Canola | nucleus | 10.85 | 39.44 |
| CDY27612 | Canola | nucleus | 24.42 | 38.3 |
| PGSC0003DMT400084734 | Potato | nucleus | 34.5 | 38.28 |
| CDY27935 | Canola | nucleus | 10.85 | 38.1 |
| CDY03913 | Canola | nucleus | 27.13 | 37.74 |
| Solyc05g015510.2.1 | Tomato | nucleus | 33.72 | 37.58 |
| CDY15713 | Canola | nucleus | 28.29 | 37.44 |
| CDX84927 | Canola | nucleus | 26.55 | 37.33 |
| CDY67700 | Canola | nucleus | 25.0 | 37.28 |
| CDY37684 | Canola | nucleus | 10.08 | 36.88 |
| CDY03914 | Canola | nucleus | 26.55 | 36.83 |
| CDY11816 | Canola | nucleus | 25.97 | 36.71 |
| CDY15712 | Canola | nucleus | 26.55 | 36.63 |
| CDY57212 | Canola | nucleus | 9.88 | 36.17 |
| CDY27611 | Canola | nucleus | 25.19 | 35.62 |
| GSMUA_Achr9P23140_001 | Banana | nucleus | 28.68 | 35.58 |
| GSMUA_Achr4P05720_001 | Banana | nucleus | 23.64 | 35.26 |
| CDX84928 | Canola | nucleus | 24.81 | 35.16 |
| GSMUA_Achr9P14160_001 | Banana | nucleus | 31.2 | 35.15 |
| GSMUA_Achr4P12470_001 | Banana | nucleus | 23.45 | 34.57 |
| Os02t0174100-02 | Rice | nucleus | 16.67 | 34.26 |
| GSMUA_Achr3P27750_001 | Banana | nucleus | 31.01 | 34.12 |
| GSMUA_Achr5P21990_001 | Banana | nucleus | 27.71 | 33.03 |
| PGSC0003DMT400068752 | Potato | nucleus | 24.61 | 32.99 |
| TraesCS6A01G155300.1 | Wheat | nucleus | 20.74 | 32.62 |
| TraesCS6D01G145200.1 | Wheat | nucleus | 20.54 | 32.62 |
| Solyc04g045560.2.1 | Tomato | nucleus | 22.09 | 32.57 |
| GSMUA_Achr3P05360_001 | Banana | nucleus | 29.26 | 32.54 |
| Zm00001d015410_P002 | Maize | nucleus | 20.93 | 32.53 |
| CDY50515 | Canola | nucleus | 9.88 | 32.48 |
| GSMUA_Achr10P... | Banana | nucleus | 30.62 | 32.44 |
| TraesCS6B01G183400.1 | Wheat | nucleus | 20.54 | 32.42 |
| TraesCS6D01G098500.1 | Wheat | nucleus | 29.46 | 32.14 |
| Zm00001d014698_P001 | Maize | nucleus | 27.33 | 32.12 |
| TraesCS6B01G138400.1 | Wheat | nucleus | 29.26 | 31.92 |
| HORVU6Hr1G031450.6 | Barley | nucleus | 20.16 | 31.9 |
| EES04609 | Sorghum | nucleus | 20.74 | 31.75 |
| TraesCS6A01G110100.2 | Wheat | nucleus | 29.07 | 31.58 |
| GSMUA_Achr10P... | Banana | nucleus | 30.81 | 31.55 |
| OQU77017 | Sorghum | nucleus | 26.74 | 31.36 |
| GSMUA_Achr6P36010_001 | Banana | nucleus | 26.55 | 31.28 |
| GSMUA_Achr5P22630_001 | Banana | nucleus | 27.52 | 31.28 |
| Zm00001d053775_P001 | Maize | nucleus | 19.96 | 31.12 |
| Os06t0703500-02 | Rice | nucleus | 28.49 | 30.95 |
| CDY24113 | Canola | nucleus | 9.5 | 30.43 |
| EES04495 | Sorghum | nucleus | 28.1 | 30.21 |
| HORVU6Hr1G019700.3 | Barley | nucleus | 29.65 | 30.18 |
| CDY25876 | Canola | nucleus | 10.27 | 30.11 |
| CDX79544 | Canola | nucleus | 10.85 | 29.95 |
| Zm00001d015233_P001 | Maize | mitochondrion, nucleus, plastid | 29.46 | 28.63 |
| CDY32310 | Canola | nucleus | 9.69 | 28.41 |
| CDY20128 | Canola | nucleus | 9.69 | 28.41 |
| GSMUA_Achr8P23820_001 | Banana | nucleus | 28.88 | 28.27 |
| Os06t0663500-00 | Rice | nucleus | 18.6 | 27.99 |
| CDX97645 | Canola | nucleus | 9.69 | 27.93 |
| Zm00001d053890_P003 | Maize | nucleus | 25.97 | 27.8 |
| CDY61210 | Canola | nucleus | 9.5 | 27.37 |
| CDX98540 | Canola | nucleus | 9.5 | 27.37 |
| CDX98259 | Canola | nucleus | 16.86 | 26.77 |
| CDY61750 | Canola | nucleus | 15.5 | 25.97 |
| CDX95958 | Canola | nucleus | 14.92 | 25.75 |
| CDX67715 | Canola | nucleus | 15.5 | 25.32 |
| CDX79888 | Canola | nucleus | 17.44 | 24.46 |
| CDY69014 | Canola | nucleus | 14.92 | 24.14 |
| CDY50300 | Canola | nucleus | 15.31 | 24.09 |
| CDY53504 | Canola | nucleus | 17.25 | 24.05 |
| CDY45826 | Canola | nucleus | 15.89 | 24.05 |
| CDY06881 | Canola | nucleus | 16.86 | 23.97 |
| CDX96251 | Canola | nucleus | 15.12 | 23.78 |
| CDY47656 | Canola | nucleus | 14.92 | 23.77 |
| CDX90071 | Canola | nucleus | 14.34 | 23.72 |
| CDY14818 | Canola | nucleus | 16.67 | 23.43 |
| CDX84872 | Canola | nucleus | 15.31 | 23.17 |
| CDX71667 | Canola | nucleus | 15.89 | 22.84 |
| CDX81606 | Canola | nucleus | 14.53 | 22.52 |
| CDY15132 | Canola | nucleus | 10.08 | 22.32 |
| CDY34028 | Canola | nucleus | 14.53 | 21.55 |
| CDY38043 | Canola | nucleus | 13.57 | 20.9 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 0.58 | 5.17 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:A0A078ICF2 | UniProt:A0A078ICF2 | EnsemblPlants:CDY47812 | ProteinID:CDY47812 |
| ProteinID:CDY47812.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00088261001 | InterPro:IPR004333 |
| InterPro:IPR036893 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF30 | InterPro:SBP_dom |
| InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI0004EDC51C | SEG:seg | : | : |
Description
BnaC07g17030DBnaC07g17030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ICF2]
Coordinates
chrLK032738:-:67221..70919
Molecular Weight (calculated)
57483.3 Da
IEP (calculated)
8.386
GRAVY (calculated)
-0.556
Length
516 amino acids
Sequence
(BLAST)
(BLAST)
001: MNESSKKVEA GERQFDPSPS PNLVLRFAHI TCFLSLSLLF SSPTLVLLSK CSVLCQAKKG SFTPLTTRSF PNSLINRFWC FSVCMECNAK PSLQWEWDNL
101: ISFGTSSAEI PKKQRPMDWE NDGFDCTTFY SSSFSTVAAY GGSSGSDLAH AFSKSSKSTS ISSSSAEVRT YNFTSEAGES VPAGSSEEFA MGIDTSPSLE
201: LSFGSGDPVL GLKLGKRTYF EDFWEVENAK GSAALPVSLA SSSASPVKKS KPISQKLQTP HCQVEGCNLD LSSAKDYHRK HRICENHSKF PKVIVNGLER
301: RFCQQCSRFH CLSEFDEKKR SCRRRLSDHN ARRRKPNPGR TYDGKQHMDF VWNRFALIHP RSEEKFLWPN PKPVPSRGLL QEPATTEMPS KLFTEQCGFG
401: LLDPKTKTTR AELFSKDLLE KVTISSHIST SQDLDGALSL LSNSTPWVSS DQPRRFSLNH HSTSNLQPVV HGSVTQPNSV SSYWQPDPPA VEGSTALPRN
501: GEGQFNDHYN LNQFYN
101: ISFGTSSAEI PKKQRPMDWE NDGFDCTTFY SSSFSTVAAY GGSSGSDLAH AFSKSSKSTS ISSSSAEVRT YNFTSEAGES VPAGSSEEFA MGIDTSPSLE
201: LSFGSGDPVL GLKLGKRTYF EDFWEVENAK GSAALPVSLA SSSASPVKKS KPISQKLQTP HCQVEGCNLD LSSAKDYHRK HRICENHSKF PKVIVNGLER
301: RFCQQCSRFH CLSEFDEKKR SCRRRLSDHN ARRRKPNPGR TYDGKQHMDF VWNRFALIHP RSEEKFLWPN PKPVPSRGLL QEPATTEMPS KLFTEQCGFG
401: LLDPKTKTTR AELFSKDLLE KVTISSHIST SQDLDGALSL LSNSTPWVSS DQPRRFSLNH HSTSNLQPVV HGSVTQPNSV SSYWQPDPPA VEGSTALPRN
501: GEGQFNDHYN LNQFYN
001: MECNAKPPFQ WELENLISFG TSTAEVPRKL KPMEWEIDGF DCTSLYSSSF AYAGSSGSDI AHAFSKSSKS TSISSSSAEV RTHNFTSETG ESLPGEFAKG
101: IDTSPSLELS FGSGDPVLGL KLGKRTYFED FWEVENAKGL GLPVTLASSS VSPVKKSKSI PQRLQTPHCQ VEGCNLDLSS AKDYHRKHRI CENHSKFPKV
201: VVSGVERRFC QQCSRFHCLS EFDEKKRSCR RRLSDHNARR RKPNPGRTYD GKPQVDFVWN RFALIHPRSE EKFIWPSSKH VPSRVLMPQP AKTEISDTEH
301: NRFGLLDPKT KTARAELFSK EKVTISSHMG ASQDLDGALS LLSNSTTWVS SSDQPRRFTL DHHPSSNLQP VAHRSAAQLN SVSGYWQPDP PAVEGPTALH
401: RNGVGQFNEN YFSLNQFYN
101: IDTSPSLELS FGSGDPVLGL KLGKRTYFED FWEVENAKGL GLPVTLASSS VSPVKKSKSI PQRLQTPHCQ VEGCNLDLSS AKDYHRKHRI CENHSKFPKV
201: VVSGVERRFC QQCSRFHCLS EFDEKKRSCR RRLSDHNARR RKPNPGRTYD GKPQVDFVWN RFALIHPRSE EKFIWPSSKH VPSRVLMPQP AKTEISDTEH
301: NRFGLLDPKT KTARAELFSK EKVTISSHMG ASQDLDGALS LLSNSTTWVS SSDQPRRFTL DHHPSSNLQP VAHRSAAQLN SVSGYWQPDP PAVEGPTALH
401: RNGVGQFNEN YFSLNQFYN
Arabidopsis Description
SPL2Squamosa promoter-binding-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S840]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.