Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033221.1-P | Field mustard | nucleus | 74.63 | 76.22 |
| CDX90071 | Canola | nucleus | 70.45 | 75.64 |
| CDY15132 | Canola | nucleus | 50.45 | 72.53 |
| AT1G02065.1 | Thale cress | nucleus | 69.55 | 69.97 |
| VIT_15s0021g02300.t01 | Wine grape | nucleus | 47.76 | 52.63 |
| PGSC0003DMT400074976 | Potato | nucleus | 43.28 | 49.49 |
| Solyc10g018780.1.1 | Tomato | nucleus | 42.39 | 48.46 |
| Solyc01g090730.2.1 | Tomato | nucleus | 42.99 | 48.16 |
| KRH66611 | Soybean | nucleus | 47.46 | 47.32 |
| PGSC0003DMT400066955 | Potato | nucleus | 41.79 | 46.36 |
| KRH48747 | Soybean | nucleus | 45.97 | 45.56 |
| KRH75288 | Soybean | nucleus | 37.91 | 44.25 |
| KRH07602 | Soybean | nucleus | 27.16 | 42.13 |
| CDY57212 | Canola | nucleus | 17.31 | 41.13 |
| CDY17204 | Canola | nucleus | 17.31 | 40.85 |
| CDY27935 | Canola | nucleus | 17.91 | 40.82 |
| CDY37684 | Canola | nucleus | 16.72 | 39.72 |
| CDY50515 | Canola | nucleus | 17.01 | 36.31 |
| CDY24113 | Canola | nucleus | 17.31 | 36.02 |
| CDY20128 | Canola | nucleus | 17.91 | 34.09 |
| CDX97645 | Canola | nucleus | 17.91 | 33.52 |
| CDX98540 | Canola | nucleus | 17.61 | 32.96 |
| CDY32310 | Canola | nucleus | 17.31 | 32.95 |
| CDY61210 | Canola | nucleus | 17.31 | 32.4 |
| CDY25876 | Canola | nucleus | 17.01 | 32.39 |
| CDX79544 | Canola | nucleus | 17.31 | 31.02 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 28.96 | 30.5 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 29.85 | 30.49 |
| TraesCS7D01G482300.1 | Wheat | nucleus | 27.16 | 28.71 |
| EES11579 | Sorghum | nucleus | 28.66 | 24.0 |
| Zm00001d026491_P001 | Maize | nucleus | 28.36 | 23.99 |
| TraesCS7D01G482400.1 | Wheat | nucleus | 27.76 | 23.97 |
| Zm00001d002005_P001 | Maize | nucleus | 28.36 | 23.81 |
| TraesCS2D01G502900.2 | Wheat | nucleus | 28.66 | 23.59 |
| TraesCS2B01G530400.1 | Wheat | nucleus | 28.66 | 23.53 |
| TraesCS7B01G402400.1 | Wheat | nucleus | 28.06 | 23.44 |
| TraesCS7D01G482500.1 | Wheat | nucleus | 28.96 | 23.32 |
| TraesCS2A01G502300.1 | Wheat | nucleus | 28.66 | 23.3 |
| TraesCS7A01G495000.1 | Wheat | nucleus | 28.06 | 23.15 |
| TraesCS7A01G494900.1 | Wheat | nucleus | 27.16 | 23.1 |
| CDX95958 | Canola | nucleus | 20.6 | 23.08 |
| TraesCS7B01G402300.1 | Wheat | nucleus | 26.87 | 23.08 |
| TraesCS7B01G402200.1 | Wheat | nucleus | 28.66 | 23.02 |
| TraesCS7A01G495100.1 | Wheat | nucleus | 28.66 | 22.91 |
| Os04t0656500-01 | Rice | nucleus | 28.36 | 22.84 |
| Zm00001d046906_P001 | Maize | nucleus | 28.36 | 22.41 |
| TraesCS7D01G482200.1 | Wheat | nucleus | 27.16 | 22.3 |
| Zm00001d015451_P001 | Maize | nucleus | 29.25 | 22.22 |
| TraesCS6B01G180300.1 | Wheat | nucleus | 29.25 | 22.17 |
| EER88765 | Sorghum | nucleus | 29.25 | 22.07 |
| Zm00001d053756_P001 | Maize | nucleus | 26.57 | 21.92 |
| TraesCS6D01G142100.1 | Wheat | nucleus | 29.55 | 21.9 |
| Os06t0659100-00 | Rice | nucleus | 27.76 | 21.83 |
| TraesCS6A01G152000.1 | Wheat | nucleus | 28.96 | 21.65 |
| TraesCS7A01G494800.1 | Wheat | nucleus | 25.67 | 21.55 |
| Zm00001d036692_P001 | Maize | nucleus | 27.76 | 21.43 |
| OQU84482 | Sorghum | nucleus | 28.36 | 21.35 |
| CDY27612 | Canola | nucleus | 20.9 | 21.28 |
| CDY61750 | Canola | nucleus | 19.4 | 21.1 |
| CDY69014 | Canola | nucleus | 20.0 | 21.0 |
| Os02t0177300-00 | Rice | nucleus | 28.66 | 20.51 |
| CDY50300 | Canola | nucleus | 20.0 | 20.43 |
| HORVU6Hr1G030490.2 | Barley | nucleus, plastid | 29.85 | 20.37 |
| CDX96251 | Canola | nucleus | 19.7 | 20.12 |
| CDX81606 | Canola | nucleus | 20.0 | 20.12 |
| CDY47656 | Canola | nucleus | 19.4 | 20.06 |
| HORVU7Hr1G110980.3 | Barley | nucleus, plastid | 26.57 | 19.82 |
| CDX98259 | Canola | nucleus | 19.1 | 19.69 |
| CDX84872 | Canola | nucleus | 20.0 | 19.65 |
| CDY34028 | Canola | nucleus | 20.3 | 19.54 |
| CDX84928 | Canola | nucleus | 21.19 | 19.51 |
| CDY45826 | Canola | nucleus | 19.7 | 19.35 |
| CDX79888 | Canola | nucleus | 21.19 | 19.29 |
| CDY53504 | Canola | nucleus | 21.19 | 19.19 |
| CDY27611 | Canola | nucleus | 20.9 | 19.18 |
| CDY67700 | Canola | nucleus | 19.7 | 19.08 |
| CDX84927 | Canola | nucleus | 20.9 | 19.07 |
| CDY06881 | Canola | nucleus | 20.6 | 19.01 |
| CDX67715 | Canola | nucleus | 17.91 | 18.99 |
| CDX71667 | Canola | nucleus | 20.0 | 18.66 |
| CDY11816 | Canola | nucleus | 20.3 | 18.63 |
| CDY14818 | Canola | nucleus | 20.3 | 18.53 |
| CDY43604 | Canola | nucleus | 21.19 | 18.44 |
| CDY15712 | Canola | nucleus | 20.3 | 18.18 |
| CDY03914 | Canola | nucleus | 20.0 | 18.01 |
| CDY15713 | Canola | nucleus | 20.9 | 17.95 |
| CDY32959 | Canola | nucleus | 20.9 | 17.95 |
| CDY03913 | Canola | nucleus | 19.7 | 17.79 |
| CDY47812 | Canola | nucleus | 20.9 | 13.57 |
| CDY22356 | Canola | nucleus | 20.9 | 13.49 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 1.49 | 8.62 |
| HORVU2Hr1G111620.1 | Barley | cytosol, nucleus | 1.49 | 7.81 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:A0A078HML5 | UniProt:A0A078HML5 | EnsemblPlants:CDY38043 | ProteinID:CDY38043 |
| ProteinID:CDY38043.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00065108001 | InterPro:IPR004333 |
| InterPro:IPR036893 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF4 | InterPro:SBP_dom |
| InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI0004EEC955 | SEG:seg | : | : |
Description
BnaCnng09040DSquamosa promoter-binding-like protein 8 [Source:Projected from Arabidopsis thaliana (AT1G02065) UniProtKB/Swiss-Prot;Acc:Q8GXL3]
Coordinates
chrLK032414:+:234008..235841
Molecular Weight (calculated)
37179.6 Da
IEP (calculated)
8.886
GRAVY (calculated)
-0.766
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDYEWDNTS AIMGSGEERH HHQDLDTTRA LSIFDPTQTN HHQSPYNNFS PPLFSSQQHL TVVYGHHQTA HNIPTNQFHH SFYDPNPYSS SSSDSIYHAH
101: SSASALFSFD QSGPAGSGSS YNFLVPKTEV DVSRSLDFST SNRIGLNLGG RTYFSAGDDD FVSRLYRRSR PGELLGMGNS LSTTTTTPRC QAERCNADLS
201: HAKHYHRRHK VCEFHSKAST VVAAGLSQRF CQQCSRFHLL SEFDNGKRSC RKRLADHNRR RRKCHQSASA SGKHTPDIIT TPKSANDSGV KSSSASPSSG
301: PTPISLECFR QRQFQTTASS STSAIWGSLA PTYNI
101: SSASALFSFD QSGPAGSGSS YNFLVPKTEV DVSRSLDFST SNRIGLNLGG RTYFSAGDDD FVSRLYRRSR PGELLGMGNS LSTTTTTPRC QAERCNADLS
201: HAKHYHRRHK VCEFHSKAST VVAAGLSQRF CQQCSRFHLL SEFDNGKRSC RKRLADHNRR RRKCHQSASA SGKHTPDIIT TPKSANDSGV KSSSASPSSG
301: PTPISLECFR QRQFQTTASS STSAIWGSLA PTYNI
001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
Arabidopsis Description
SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.