Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002005_P001 | Maize | nucleus | 82.58 | 81.95 |
| TraesCS2B01G530400.1 | Wheat | nucleus | 72.73 | 70.59 |
| TraesCS2D01G502900.2 | Wheat | nucleus | 72.22 | 70.27 |
| TraesCS2A01G502300.1 | Wheat | nucleus | 71.72 | 68.93 |
| HORVU2Hr1G111620.1 | Barley | cytosol, nucleus | 9.6 | 59.38 |
| Bra032662.1-P | Field mustard | nucleus | 17.68 | 44.3 |
| GSMUA_Achr10P... | Banana | nucleus | 21.21 | 36.84 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 21.21 | 32.94 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 20.96 | 30.29 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 20.71 | 30.15 |
| VIT_15s0021g02300.t01 | Wine grape | nucleus | 22.98 | 29.93 |
| CDX90071 | Canola | nucleus | 23.23 | 29.49 |
| KRH75288 | Soybean | nucleus | 20.96 | 28.92 |
| PGSC0003DMT400074976 | Potato | nucleus | 21.21 | 28.67 |
| Solyc10g018780.1.1 | Tomato | nucleus | 21.21 | 28.67 |
| Bra033221.1-P | Field mustard | nucleus | 23.74 | 28.66 |
| CDY38043 | Canola | nucleus | 23.99 | 28.36 |
| Zm00001d021573_P001 | Maize | mitochondrion | 14.65 | 28.16 |
| Solyc01g090730.2.1 | Tomato | nucleus | 21.21 | 28.09 |
| AT1G02065.1 | Thale cress | nucleus | 22.98 | 27.33 |
| PGSC0003DMT400066955 | Potato | nucleus | 20.71 | 27.15 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 24.24 | 27.12 |
| KRH66611 | Soybean | nucleus | 22.98 | 27.08 |
| CDY15132 | Canola | nucleus | 15.91 | 27.04 |
| KRH48747 | Soybean | nucleus | 22.47 | 26.33 |
| Zm00001d006451_P001 | Maize | mitochondrion | 16.41 | 25.59 |
| Zm00001d053775_P001 | Maize | nucleus | 20.2 | 24.17 |
| Zm00001d036692_P001 | Maize | nucleus | 26.26 | 23.96 |
| Zm00001d015410_P002 | Maize | nucleus | 19.95 | 23.8 |
| Zm00001d046906_P001 | Maize | nucleus | 25.0 | 23.35 |
| KRH07602 | Soybean | nucleus | 12.63 | 23.15 |
| Zm00001d053756_P001 | Maize | nucleus | 22.98 | 22.41 |
| Zm00001d015451_P001 | Maize | nucleus | 23.99 | 21.54 |
| Zm00001d031451_P001 | Maize | nucleus | 21.46 | 21.09 |
| Zm00001d052890_P001 | Maize | nucleus | 21.46 | 20.83 |
| Zm00001d012015_P001 | Maize | nucleus | 19.7 | 20.8 |
| Zm00001d020941_P001 | Maize | nucleus | 19.7 | 20.63 |
| Zm00001d006028_P001 | Maize | nucleus | 19.7 | 20.37 |
| Zm00001d006091_P001 | Maize | nucleus | 20.96 | 19.62 |
| Zm00001d042319_P001 | Maize | nucleus | 20.2 | 19.56 |
| Zm00001d026175_P001 | Maize | nucleus | 19.19 | 19.05 |
| Zm00001d049822_P001 | Maize | nucleus | 19.44 | 17.82 |
| Zm00001d014698_P001 | Maize | nucleus | 19.7 | 17.77 |
| Zm00001d049824_P002 | Maize | nucleus | 19.44 | 17.7 |
| Zm00001d053890_P003 | Maize | nucleus | 21.21 | 17.43 |
| Zm00001d021056_P001 | Maize | nucleus | 20.45 | 17.42 |
| Zm00001d015233_P001 | Maize | mitochondrion, nucleus, plastid | 22.22 | 16.57 |
Protein Annotations
| EntrezGene:103642145 | MapMan:15.5.18 | Gene3D:4.10.1100.10 | ProteinID:AQK46787.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0046872 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:K7TP97 | PFAM:PF03110 | PFscan:PS51141 |
| PANTHER:PTHR31251 | PANTHER:PTHR31251:SF17 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI000220F50C |
| EnsemblPlantsGene:Zm00001d026491 | EnsemblPlants:Zm00001d026491_P001 | EnsemblPlants:Zm00001d026491_T001 | SEG:seg | : | : |
Description
SBP-transcription factor 28Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
Coordinates
chr10:+:147051884..147055513
Molecular Weight (calculated)
43271.2 Da
IEP (calculated)
8.007
GRAVY (calculated)
-0.709
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNLSAAAAA AANACDEFPY APPNAAAPPS LFPIMEQESS IHREHQQQQL GLGYNPEPNS LALLPPSDAA HHTTIAAGPH DILQFYPASA SHYLAASNPY
101: GHFAGSSSFH QSSSSSSSYY YPPPPQAAPE YYFPTLVSSA EENMASFAAT QLGLNLGYRT YFPPRGGYTY GHHPPRCQAE GCKADLSGAK RYHRRHKVCD
201: HHSKAPVVVT AGGMHQRFCQ QCSRFHLLDE FDDAKKSCRK RLADHNRRRR KSKPSDADAG DKKRAHANKA APAKDKAGSS SKHMHIAGLG TQILGSTLLS
301: KEQDQAMDLG EVVKEAVDPK GKASMLQHHG IHQQQHHGIH QQHHGFPFHS SSAGSSDTTS NIAQVQEPSL GFHHQHHQHS NVLQLGQAMF DLDFDH
101: GHFAGSSSFH QSSSSSSSYY YPPPPQAAPE YYFPTLVSSA EENMASFAAT QLGLNLGYRT YFPPRGGYTY GHHPPRCQAE GCKADLSGAK RYHRRHKVCD
201: HHSKAPVVVT AGGMHQRFCQ QCSRFHLLDE FDDAKKSCRK RLADHNRRRR KSKPSDADAG DKKRAHANKA APAKDKAGSS SKHMHIAGLG TQILGSTLLS
301: KEQDQAMDLG EVVKEAVDPK GKASMLQHHG IHQQQHHGIH QQHHGFPFHS SSAGSSDTTS NIAQVQEPSL GFHHQHHQHS NVLQLGQAMF DLDFDH
001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
Arabidopsis Description
SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.