Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES14266 | Sorghum | nucleus | 85.11 | 83.86 |
| Zm00001d052890_P001 | Maize | nucleus | 81.89 | 80.88 |
| Zm00001d020941_P001 | Maize | nucleus | 52.36 | 55.82 |
| Zm00001d006028_P001 | Maize | nucleus | 49.88 | 52.48 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 41.69 | 48.55 |
| KRG95361 | Soybean | nucleus | 30.27 | 33.98 |
| KRH67040 | Soybean | nucleus | 29.53 | 32.43 |
| VIT_08s0007g06270.t01 | Wine grape | nucleus | 29.28 | 31.13 |
| KRH71914 | Soybean | nucleus, plastid | 27.3 | 30.73 |
| PGSC0003DMT400029751 | Potato | nucleus | 28.29 | 30.65 |
| Solyc10g078700.1.1 | Tomato | nucleus | 28.04 | 30.38 |
| KRH38141 | Soybean | nucleus, plastid | 27.79 | 30.03 |
| AT2G42200.1 | Thale cress | nucleus | 27.54 | 29.6 |
| CDX98259 | Canola | nucleus | 23.82 | 29.54 |
| CDY06881 | Canola | nucleus | 26.55 | 29.48 |
| Bra016891.1-P | Field mustard | nucleus | 26.55 | 29.48 |
| CDY14818 | Canola | nucleus | 26.55 | 29.16 |
| Zm00001d021573_P001 | Maize | mitochondrion | 14.89 | 29.13 |
| CDX79888 | Canola | nucleus | 26.3 | 28.8 |
| CDY47656 | Canola | nucleus | 23.08 | 28.7 |
| CDY61750 | Canola | nucleus | 21.84 | 28.57 |
| Bra003305.1-P | Field mustard | nucleus | 22.33 | 28.48 |
| CDY53504 | Canola | nucleus | 26.05 | 28.38 |
| CDX67715 | Canola | nucleus | 22.08 | 28.16 |
| Bra004674.1-P | Field mustard | nucleus | 25.31 | 27.64 |
| Zm00001d006451_P001 | Maize | mitochondrion | 17.12 | 27.17 |
| AT3G57920.1 | Thale cress | nucleus | 23.57 | 26.84 |
| Bra014599.1-P | Field mustard | nucleus | 19.85 | 26.49 |
| Zm00001d053775_P001 | Maize | nucleus | 18.61 | 22.66 |
| Zm00001d015410_P002 | Maize | nucleus | 18.11 | 21.99 |
| Zm00001d012015_P001 | Maize | nucleus | 20.35 | 21.87 |
| Zm00001d026175_P001 | Maize | nucleus | 21.59 | 21.8 |
| Zm00001d026491_P001 | Maize | nucleus | 21.09 | 21.46 |
| Zm00001d002005_P001 | Maize | nucleus | 21.09 | 21.3 |
| Zm00001d006091_P001 | Maize | nucleus | 21.84 | 20.8 |
| Zm00001d042319_P001 | Maize | nucleus | 21.09 | 20.78 |
| Zm00001d049824_P002 | Maize | nucleus | 21.34 | 19.77 |
| Zm00001d049822_P001 | Maize | nucleus | 21.09 | 19.68 |
| Zm00001d021056_P001 | Maize | nucleus | 22.33 | 19.35 |
| Zm00001d036692_P001 | Maize | nucleus | 20.35 | 18.89 |
| Zm00001d046906_P001 | Maize | nucleus | 19.11 | 18.16 |
| Zm00001d053756_P001 | Maize | nucleus | 17.62 | 17.49 |
| Zm00001d053890_P003 | Maize | nucleus | 20.84 | 17.43 |
| Zm00001d014698_P001 | Maize | nucleus | 18.61 | 17.08 |
| Zm00001d015451_P001 | Maize | nucleus | 18.61 | 17.01 |
| Zm00001d015233_P001 | Maize | mitochondrion, nucleus, plastid | 19.11 | 14.5 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | EntrezGene:541996 | UniProt:A0A1D6KIX0 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0046872 | InterPro:IPR004333 | InterPro:IPR036893 | ProteinID:ONM02902.1 | PFAM:PF03110 | PFscan:PS51141 |
| PANTHER:PTHR31251 | PANTHER:PTHR31251:SF67 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI000220E68D |
| EnsemblPlantsGene:Zm00001d031451 | EnsemblPlants:Zm00001d031451_P001 | EnsemblPlants:Zm00001d031451_T001 | SEG:seg | : | : |
Description
unbranched2SBP-domain protein 5
Coordinates
chr1:-:190382866..190386589
Molecular Weight (calculated)
41669.3 Da
IEP (calculated)
8.497
GRAVY (calculated)
-0.620
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MESGGGGDDQ LHGLKFGKKI YFEDAAGSSS GSSSGGGSAP APPATQQPSP PAASPRAPAG GGRRGRAAAG GAGPSTAPAP ARCQVDGCNV DLTDVKPAYY
101: CRHKVCKMHS KEPRVLVNGL EQRFCQQCSR FHQLPEFDQL KKSCRKRLAG HNERRRRPPP GPLASRYGRH AASLGEEPGR LRSFMLDFSY PRVSSAMRGG
201: FPAVRPGGER VPGGIQWQAG LDPRHHQGAV AGYGAHYGSE GGSSSSARPP VFPGPELPPG GCLAGVPADS SCALSLLSTQ PWDAAHSHSH SHAAPTAGFD
301: GGSPVAPSLM AASSYIAPSP WTETDSWGHE GGRSVPQLPP DDVPLGEVHS GSSSHHGQFS GELELALQGN RPAPGSAAPP APRNNQGSAG TFDQAGNTMD
401: WSL
101: CRHKVCKMHS KEPRVLVNGL EQRFCQQCSR FHQLPEFDQL KKSCRKRLAG HNERRRRPPP GPLASRYGRH AASLGEEPGR LRSFMLDFSY PRVSSAMRGG
201: FPAVRPGGER VPGGIQWQAG LDPRHHQGAV AGYGAHYGSE GGSSSSARPP VFPGPELPPG GCLAGVPADS SCALSLLSTQ PWDAAHSHSH SHAAPTAGFD
301: GGSPVAPSLM AASSYIAPSP WTETDSWGHE GGRSVPQLPP DDVPLGEVHS GSSSHHGQFS GELELALQGN RPAPGSAAPP APRNNQGSAG TFDQAGNTMD
401: WSL
001: MEMGSNSGPG HGPGQAESGG SSTESSSFSG GLMFGQKIYF EDGGGGSGSS SSGGRSNRRV RGGGSGQSGQ IPRCQVEGCG MDLTNAKGYY SRHRVCGVHS
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
Arabidopsis Description
SPL9Squamosa promoter-binding-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q700W2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.