Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d049824_P002 | Maize | nucleus | 90.05 | 89.43 |
| KXG25534 | Sorghum | nucleus | 82.64 | 78.29 |
| TraesCS7A01G260500.1 | Wheat | nucleus | 64.58 | 68.55 |
| HORVU0Hr1G039170.6 | Barley | nucleus | 63.19 | 68.25 |
| TraesCS7B01G158500.1 | Wheat | nucleus | 64.35 | 67.97 |
| TraesCS7D01G261500.1 | Wheat | nucleus | 65.05 | 67.87 |
| Os08t0531600-01 | Rice | nucleus | 64.81 | 61.54 |
| Zm00001d006091_P001 | Maize | nucleus | 58.56 | 59.81 |
| Zm00001d021056_P001 | Maize | nucleus | 59.49 | 55.27 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.43 | 47.43 |
| GSMUA_AchrUn_... | Banana | nucleus | 40.05 | 46.51 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 33.56 | 45.45 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.81 | 45.04 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 41.44 | 43.34 |
| GSMUA_Achr11P... | Banana | nucleus | 36.57 | 38.07 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 31.71 | 38.06 |
| VIT_14s0068g01780.t01 | Wine grape | nucleus | 31.02 | 35.45 |
| Zm00001d012015_P001 | Maize | nucleus | 29.86 | 34.4 |
| KRG94562 | Soybean | nucleus | 28.94 | 34.25 |
| KRH06918 | Soybean | nucleus | 28.01 | 33.15 |
| Zm00001d042319_P001 | Maize | nucleus | 30.79 | 32.52 |
| Zm00001d015410_P002 | Maize | nucleus | 21.3 | 27.71 |
| Zm00001d053775_P001 | Maize | nucleus | 20.83 | 27.19 |
| Zm00001d021573_P001 | Maize | mitochondrion | 12.73 | 26.7 |
| Zm00001d006451_P001 | Maize | mitochondrion | 14.12 | 24.02 |
| Zm00001d020941_P001 | Maize | nucleus | 20.6 | 23.55 |
| Zm00001d006028_P001 | Maize | nucleus | 20.6 | 23.24 |
| Zm00001d026175_P001 | Maize | nucleus | 20.6 | 22.31 |
| Zm00001d052890_P001 | Maize | nucleus | 20.6 | 21.81 |
| Zm00001d031451_P001 | Maize | nucleus | 19.68 | 21.09 |
| Zm00001d002005_P001 | Maize | nucleus | 18.29 | 19.8 |
| Zm00001d026491_P001 | Maize | nucleus | 17.82 | 19.44 |
| Zm00001d015451_P001 | Maize | nucleus | 19.68 | 19.27 |
| Zm00001d014698_P001 | Maize | nucleus | 19.44 | 19.13 |
| Zm00001d053756_P001 | Maize | nucleus | 17.82 | 18.97 |
| Zm00001d053890_P003 | Maize | nucleus | 20.83 | 18.67 |
| Zm00001d046906_P001 | Maize | nucleus | 18.29 | 18.63 |
| Zm00001d036692_P001 | Maize | nucleus | 18.29 | 18.2 |
| Zm00001d015233_P001 | Maize | mitochondrion, nucleus, plastid | 19.91 | 16.2 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 1.16 | 8.62 |
Protein Annotations
| EntrezGene:103653213 | MapMan:15.5.18 | Gene3D:4.10.1100.10 | UniProt:A0A1B1MQA9 | ProteinID:AAX83872.1 | ProteinID:AEP96351.1 |
| ProteinID:AFW61574.1 | ProteinID:AQK51443.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | InterPro:IPR004333 |
| InterPro:IPR036893 | EMBL:KU131572 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF33 |
| UniProt:Q49I57 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI000057B84B | EnsemblPlantsGene:Zm00001d049822 |
| EnsemblPlants:Zm00001d049822_P001 | EnsemblPlants:Zm00001d049822_T001 | SEG:seg | : | : | : |
Description
teosinte glume architecture1 teosinte glume architecture1
Coordinates
chr4:+:46350597..46355118
Molecular Weight (calculated)
45170.8 Da
IEP (calculated)
7.485
GRAVY (calculated)
-0.465
Length
432 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWDLNAAGA WDLAELERDH AAAAPSSGGH AANAAAAGTG TESRPPAPGA AGAPAECSVD LKLGGMGECE PGAARREREA AAGAAKRPRP AGPGGQQQQQ
101: QCPSCAVDGC RADLGKCRDY HRRHKVCEAH SKTPVVVVAG REMRFCQQCS RFHLLAEFDA DKRSCRKRLD GHNRRRRKPQ PDTMASASFI ASQQGTRFSP
201: FAHPRLEASW PPGVMKTEES PYHITHQIPL GSSSSSRQQH FVALGAATPA YAKEGRRFPF LQEGEISFAT GVVLEPPAAA PACQPLLRTG APSESSGAGG
301: SKMFSDQGLA RVLDSDCALS LLSAPANSSG IDVSRMVRPT EHVPMAQQPV VPGLQFGSAS WFPRPQASTG GSFVPSCPAA VEGEQQLNAV LGPNDSEVSM
401: NYGGMFHVGG GSGGGEGSSD GGTSSSMPFS WQ
101: QCPSCAVDGC RADLGKCRDY HRRHKVCEAH SKTPVVVVAG REMRFCQQCS RFHLLAEFDA DKRSCRKRLD GHNRRRRKPQ PDTMASASFI ASQQGTRFSP
201: FAHPRLEASW PPGVMKTEES PYHITHQIPL GSSSSSRQQH FVALGAATPA YAKEGRRFPF LQEGEISFAT GVVLEPPAAA PACQPLLRTG APSESSGAGG
301: SKMFSDQGLA RVLDSDCALS LLSAPANSSG IDVSRMVRPT EHVPMAQQPV VPGLQFGSAS WFPRPQASTG GSFVPSCPAA VEGEQQLNAV LGPNDSEVSM
401: NYGGMFHVGG GSGGGEGSSD GGTSSSMPFS WQ
001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
Arabidopsis Description
SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.