Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031451_P001 | Maize | nucleus | 80.88 | 81.89 |
| EES14266 | Sorghum | nucleus | 81.13 | 80.93 |
| Zm00001d020941_P001 | Maize | nucleus | 51.23 | 55.29 |
| Zm00001d006028_P001 | Maize | nucleus | 47.3 | 50.39 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 39.71 | 46.82 |
| KRG95361 | Soybean | nucleus | 29.66 | 33.7 |
| KRH67040 | Soybean | nucleus | 29.41 | 32.7 |
| KRH71914 | Soybean | nucleus, plastid | 28.43 | 32.4 |
| VIT_08s0007g06270.t01 | Wine grape | nucleus | 29.41 | 31.66 |
| KRH38141 | Soybean | nucleus, plastid | 28.68 | 31.37 |
| PGSC0003DMT400029751 | Potato | nucleus | 27.94 | 30.65 |
| Solyc10g078700.1.1 | Tomato | nucleus | 27.7 | 30.38 |
| Zm00001d021573_P001 | Maize | mitochondrion | 14.95 | 29.61 |
| AT2G42200.1 | Thale cress | nucleus | 27.21 | 29.6 |
| CDY06881 | Canola | nucleus | 26.23 | 29.48 |
| Bra016891.1-P | Field mustard | nucleus | 26.23 | 29.48 |
| CDY14818 | Canola | nucleus | 26.23 | 29.16 |
| CDX79888 | Canola | nucleus | 25.74 | 28.53 |
| CDX98259 | Canola | nucleus | 22.55 | 28.31 |
| CDY53504 | Canola | nucleus | 25.49 | 28.11 |
| CDY47656 | Canola | nucleus | 21.81 | 27.47 |
| Bra004674.1-P | Field mustard | nucleus | 24.75 | 27.37 |
| Bra003305.1-P | Field mustard | nucleus | 21.08 | 27.22 |
| CDY61750 | Canola | nucleus | 20.34 | 26.95 |
| CDX67715 | Canola | nucleus | 20.83 | 26.9 |
| Zm00001d006451_P001 | Maize | mitochondrion | 16.42 | 26.38 |
| AT3G57920.1 | Thale cress | nucleus | 21.57 | 24.86 |
| Bra014599.1-P | Field mustard | nucleus | 18.38 | 24.83 |
| Zm00001d012015_P001 | Maize | nucleus | 21.57 | 23.47 |
| Zm00001d053775_P001 | Maize | nucleus | 18.63 | 22.96 |
| Zm00001d015410_P002 | Maize | nucleus | 17.89 | 21.99 |
| Zm00001d026175_P001 | Maize | nucleus | 21.32 | 21.8 |
| Zm00001d002005_P001 | Maize | nucleus | 21.08 | 21.55 |
| Zm00001d006091_P001 | Maize | nucleus | 22.3 | 21.51 |
| Zm00001d026491_P001 | Maize | nucleus | 20.83 | 21.46 |
| Zm00001d042319_P001 | Maize | nucleus | 21.32 | 21.27 |
| Zm00001d049824_P002 | Maize | nucleus | 22.06 | 20.69 |
| Zm00001d049822_P001 | Maize | nucleus | 21.81 | 20.6 |
| Zm00001d021056_P001 | Maize | nucleus | 23.04 | 20.22 |
| Zm00001d053890_P003 | Maize | nucleus | 21.57 | 18.26 |
| Zm00001d036692_P001 | Maize | nucleus | 19.36 | 18.2 |
| Zm00001d046906_P001 | Maize | nucleus | 18.63 | 17.92 |
| Zm00001d053756_P001 | Maize | nucleus | 17.65 | 17.73 |
| Zm00001d014698_P001 | Maize | nucleus | 18.63 | 17.31 |
| Zm00001d015451_P001 | Maize | nucleus | 18.38 | 17.01 |
| Zm00001d015233_P001 | Maize | mitochondrion, nucleus, plastid | 19.61 | 15.07 |
Protein Annotations
| EntrezGene:103654498 | MapMan:15.5.18 | Gene3D:4.10.1100.10 | ProteinID:AQK58303.1 | UniProt:B7ZYE2 | EMBL:BT054334 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | InterPro:IPR004333 | InterPro:IPR036893 | PFAM:PF03110 |
| PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF67 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 |
| UniParc:UPI0001917525 | EnsemblPlantsGene:Zm00001d052890 | EnsemblPlants:Zm00001d052890_P001 | EnsemblPlants:Zm00001d052890_T001 | SEG:seg | : |
Description
unbranched3Squamosa promoter-binding-like protein 15
Coordinates
chr4:-:203611347..203615518
Molecular Weight (calculated)
41903.6 Da
IEP (calculated)
8.496
GRAVY (calculated)
-0.608
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAGGASGGD DGDGQLHGLK FGKKIYFEDA GGSSSSGGSG SASATAPPAT QQPSPPAASP RAAPGGGRRG RAAAGGAGPS LPPAPPRCLV DGCNADLTDA
101: KTYYCRHKVC EMHSKEPRVV VNGLELRFCQ QCSRFHNLAE FDQQKKSCRK RLAGHNERRR RPPPGPLASR YGRLAAPLGE EPGGRFRSFM LDFSYPRVPS
201: AMRDGFPAVR PGGERVPGSN IQWQAASLDP PPPHHQSAAA GYGAHSYGSP GSSSSSRPPV FPAGPELPPG GGCLAGVPTD SSCALSLLST QPWDAAGHSA
301: GHGHGHAASL PATAGFDGNP VAMASSYIAP PSPWTDSRAH EGGRRNVPQL PPDVPLGDVH SGPGTHHGQF SGELELALQG NRPAPAPRNG QGSAGAFDQA
401: GSTTEWSL
101: KTYYCRHKVC EMHSKEPRVV VNGLELRFCQ QCSRFHNLAE FDQQKKSCRK RLAGHNERRR RPPPGPLASR YGRLAAPLGE EPGGRFRSFM LDFSYPRVPS
201: AMRDGFPAVR PGGERVPGSN IQWQAASLDP PPPHHQSAAA GYGAHSYGSP GSSSSSRPPV FPAGPELPPG GGCLAGVPTD SSCALSLLST QPWDAAGHSA
301: GHGHGHAASL PATAGFDGNP VAMASSYIAP PSPWTDSRAH EGGRRNVPQL PPDVPLGDVH SGPGTHHGQF SGELELALQG NRPAPAPRNG QGSAGAFDQA
401: GSTTEWSL
001: MEMGSNSGPG HGPGQAESGG SSTESSSFSG GLMFGQKIYF EDGGGGSGSS SSGGRSNRRV RGGGSGQSGQ IPRCQVEGCG MDLTNAKGYY SRHRVCGVHS
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
Arabidopsis Description
SPL9Squamosa promoter-binding-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q700W2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.