Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031451_P001 | Maize | nucleus | 83.86 | 85.11 |
| Zm00001d052890_P001 | Maize | nucleus | 80.93 | 81.13 |
| EER99092 | Sorghum | nucleus | 55.01 | 57.99 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 41.81 | 49.42 |
| KRG95361 | Soybean | nucleus | 30.32 | 34.54 |
| KRH67040 | Soybean | nucleus | 29.34 | 32.7 |
| EER97257 | Sorghum | nucleus | 17.11 | 32.56 |
| VIT_08s0007g06270.t01 | Wine grape | nucleus | 30.07 | 32.45 |
| PGSC0003DMT400029751 | Potato | nucleus | 28.61 | 31.45 |
| KRH71914 | Soybean | nucleus, plastid | 27.38 | 31.28 |
| Solyc10g078700.1.1 | Tomato | nucleus | 28.36 | 31.18 |
| KRH38141 | Soybean | nucleus, plastid | 28.36 | 31.1 |
| Bra016891.1-P | Field mustard | nucleus | 26.89 | 30.3 |
| CDY06881 | Canola | nucleus | 26.89 | 30.3 |
| AT2G42200.1 | Thale cress | nucleus | 27.63 | 30.13 |
| CDY14818 | Canola | nucleus | 26.89 | 29.97 |
| CDX79888 | Canola | nucleus | 26.65 | 29.62 |
| CDX98259 | Canola | nucleus | 23.47 | 29.54 |
| CDY53504 | Canola | nucleus | 26.41 | 29.19 |
| CDY47656 | Canola | nucleus | 22.74 | 28.7 |
| CDY61750 | Canola | nucleus | 21.52 | 28.57 |
| Bra004674.1-P | Field mustard | nucleus | 25.67 | 28.46 |
| Bra003305.1-P | Field mustard | nucleus | 21.76 | 28.16 |
| CDX67715 | Canola | nucleus | 21.52 | 27.85 |
| AT3G57920.1 | Thale cress | nucleus | 23.72 | 27.4 |
| KXG36284 | Sorghum | nucleus | 14.43 | 27.06 |
| Bra014599.1-P | Field mustard | nucleus | 19.56 | 26.49 |
| EES11232 | Sorghum | nucleus | 24.45 | 23.92 |
| EES01979 | Sorghum | nucleus | 23.47 | 23.82 |
| EES04609 | Sorghum | nucleus | 19.56 | 23.74 |
| EES11579 | Sorghum | nucleus | 21.76 | 22.25 |
| KXG25534 | Sorghum | nucleus | 22.49 | 20.18 |
| EER97011 | Sorghum | nucleus | 22.25 | 19.61 |
| OQU77017 | Sorghum | nucleus | 19.8 | 18.41 |
| EES04495 | Sorghum | nucleus | 20.29 | 17.29 |
| EER88765 | Sorghum | nucleus | 18.34 | 16.89 |
| OQU84482 | Sorghum | nucleus | 17.6 | 16.18 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | EntrezGene:8064025 | UniProt:C5YIS0 | EnsemblPlants:EES14266 | ProteinID:EES14266 |
| ProteinID:EES14266.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | InterPro:IPR004333 | InterPro:IPR036893 |
| PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF67 | InterPro:SBP_dom | InterPro:SBP_sf |
| EnsemblPlantsGene:SORBI_3007G210200 | SUPFAM:SSF103612 | UniParc:UPI0001A87EAC | RefSeq:XP_002444771.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr7:+:63877957..63882169
Molecular Weight (calculated)
42316.9 Da
IEP (calculated)
8.646
GRAVY (calculated)
-0.647
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MESGGASGGG GGGGGDDQLH GLKFGKKIYF EDAAAAGSSS GGGGGGSGNA SATTAAPATQ QPSPPQAASP RAASGGGGRR GRAAGGPSPA PAPARCQVDG
101: CNVDLTDVKP YYCRHKVCKM HSKEPRVVVN GLEQRFCQQC SRFHQLPEFD QLKKSCRRRL AGHNERRRRP PPGPLATRYG RLAASFGEEP GRFRSFMLDF
201: SYPRVPTAMR DGFPAVRPGE RAPGSIQWQA SLDPHHHQSA VAGYSAHSYG SQGSSSSRPP VFPGPEIPPG GCLAGVPSDS SCALSLLSTQ PWDTTHSSGH
301: SHAASMPATA GFDGNPVAPS LMASSYIAPS PWTDSRGHEG GRNVPQLPPD VPLSEVHSGS SSHHGQFSGE LELALQGNRP APGSAPAPRN DQGSTGAFDQ
401: SGNTMDWSL
101: CNVDLTDVKP YYCRHKVCKM HSKEPRVVVN GLEQRFCQQC SRFHQLPEFD QLKKSCRRRL AGHNERRRRP PPGPLATRYG RLAASFGEEP GRFRSFMLDF
201: SYPRVPTAMR DGFPAVRPGE RAPGSIQWQA SLDPHHHQSA VAGYSAHSYG SQGSSSSRPP VFPGPEIPPG GCLAGVPSDS SCALSLLSTQ PWDTTHSSGH
301: SHAASMPATA GFDGNPVAPS LMASSYIAPS PWTDSRGHEG GRNVPQLPPD VPLSEVHSGS SSHHGQFSGE LELALQGNRP APGSAPAPRN DQGSTGAFDQ
401: SGNTMDWSL
001: MEMGSNSGPG HGPGQAESGG SSTESSSFSG GLMFGQKIYF EDGGGGSGSS SSGGRSNRRV RGGGSGQSGQ IPRCQVEGCG MDLTNAKGYY SRHRVCGVHS
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
Arabidopsis Description
SPL9Squamosa promoter-binding-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q700W2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.