Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016891.1-P | Field mustard | nucleus | 96.46 | 97.52 |
| CDY06881 | Canola | nucleus | 95.64 | 96.69 |
| CDX79888 | Canola | nucleus | 88.01 | 87.77 |
| CDY53504 | Canola | nucleus | 88.01 | 87.3 |
| AT2G42200.1 | Thale cress | nucleus | 85.83 | 84.0 |
| CDX98259 | Canola | nucleus | 47.68 | 53.85 |
| CDX67715 | Canola | nucleus | 44.96 | 52.22 |
| CDY61750 | Canola | nucleus | 41.96 | 50.0 |
| CDY47656 | Canola | nucleus | 43.6 | 49.38 |
| VIT_08s0007g06270.t01 | Wine grape | nucleus | 46.59 | 45.12 |
| KRH67040 | Soybean | nucleus | 43.05 | 43.05 |
| KRG95361 | Soybean | nucleus | 40.87 | 41.78 |
| KRH38141 | Soybean | nucleus, plastid | 40.05 | 39.41 |
| KRH71914 | Soybean | nucleus, plastid | 38.42 | 39.39 |
| CDY27935 | Canola | nucleus | 15.53 | 38.78 |
| CDY17204 | Canola | nucleus | 14.99 | 38.73 |
| CDY37684 | Canola | nucleus | 14.71 | 38.3 |
| GSMUA_Achr4P03880_001 | Banana | nucleus | 29.43 | 37.89 |
| CDY50515 | Canola | nucleus | 15.8 | 36.94 |
| CDY57212 | Canola | nucleus | 14.17 | 36.88 |
| GSMUA_Achr7P20510_001 | Banana | nucleus | 34.06 | 36.66 |
| PGSC0003DMT400029751 | Potato | nucleus | 37.06 | 36.56 |
| Solyc10g078700.1.1 | Tomato | nucleus | 36.51 | 36.02 |
| CDY24113 | Canola | nucleus | 15.53 | 35.4 |
| CDY25876 | Canola | nucleus | 16.35 | 34.09 |
| GSMUA_Achr8P25550_001 | Banana | nucleus | 31.61 | 33.72 |
| GSMUA_Achr9P22260_001 | Banana | nucleus | 31.34 | 33.53 |
| CDY61210 | Canola | nucleus | 15.8 | 32.4 |
| CDY20128 | Canola | nucleus | 15.53 | 32.39 |
| CDY32310 | Canola | nucleus | 15.26 | 31.82 |
| GSMUA_Achr4P01450_001 | Banana | nucleus | 30.79 | 31.65 |
| CDX98540 | Canola | nucleus | 15.26 | 31.28 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 29.43 | 31.21 |
| CDX97645 | Canola | nucleus | 14.99 | 30.73 |
| Zm00001d020941_P001 | Maize | nucleus | 31.34 | 30.42 |
| GSMUA_Achr6P22280_001 | Banana | nucleus | 33.79 | 30.17 |
| Zm00001d006028_P001 | Maize | nucleus | 31.06 | 29.77 |
| EER99092 | Sorghum | nucleus | 30.79 | 29.12 |
| GSMUA_Achr3P11170_001 | Banana | nucleus | 30.25 | 28.61 |
| GSMUA_Achr9P27660_001 | Banana | nucleus | 28.61 | 28.46 |
| CDX79544 | Canola | nucleus | 14.44 | 28.34 |
| GSMUA_Achr9P20220_001 | Banana | nucleus | 18.8 | 28.05 |
| TraesCS7B01G144900.1 | Wheat | nucleus | 29.43 | 27.98 |
| TraesCS7D01G245200.2 | Wheat | nucleus | 29.16 | 27.79 |
| TraesCS5B01G265600.2 | Wheat | nucleus | 29.97 | 27.78 |
| TraesCS7A01G246500.1 | Wheat | nucleus | 29.16 | 27.72 |
| CDX95958 | Canola | nucleus | 22.34 | 27.42 |
| Os09t0491532-01 | Rice | nucleus | 23.98 | 27.24 |
| TraesCS5D01G273900.2 | Wheat | nucleus | 30.25 | 27.21 |
| TraesCS5A01G265900.2 | Wheat | nucleus | 30.25 | 27.01 |
| EES14266 | Sorghum | nucleus | 29.97 | 26.89 |
| Zm00001d031451_P001 | Maize | nucleus | 29.16 | 26.55 |
| HORVU5Hr1G073440.7 | Barley | nucleus | 29.97 | 26.44 |
| Zm00001d052890_P001 | Maize | nucleus | 29.16 | 26.23 |
| CDY69014 | Canola | nucleus | 22.62 | 26.02 |
| Os08t0509600-01 | Rice | nucleus | 28.88 | 25.42 |
| CDY50300 | Canola | nucleus | 22.34 | 25.0 |
| CDX96251 | Canola | nucleus | 22.34 | 25.0 |
| CDX81606 | Canola | nucleus | 22.62 | 24.92 |
| CDY45826 | Canola | nucleus | 21.8 | 23.46 |
| CDX84872 | Canola | nucleus | 21.8 | 23.46 |
| CDX71667 | Canola | nucleus | 22.07 | 22.56 |
| CDY43604 | Canola | nucleus | 23.43 | 22.34 |
| CDY67700 | Canola | nucleus | 20.98 | 22.25 |
| CDY27612 | Canola | nucleus | 19.89 | 22.19 |
| CDY34028 | Canola | nucleus | 20.98 | 22.13 |
| CDY03913 | Canola | nucleus | 22.07 | 21.83 |
| CDX84927 | Canola | nucleus | 21.8 | 21.8 |
| CDY32959 | Canola | nucleus | 22.89 | 21.54 |
| CDY11816 | Canola | nucleus | 21.25 | 21.37 |
| CDX84928 | Canola | nucleus | 20.98 | 21.15 |
| CDY27611 | Canola | nucleus | 20.98 | 21.1 |
| CDY15713 | Canola | nucleus | 22.07 | 20.77 |
| CDY03914 | Canola | nucleus | 20.71 | 20.43 |
| CDY15712 | Canola | nucleus | 20.71 | 20.32 |
| CDY38043 | Canola | nucleus | 18.53 | 20.3 |
| CDX90071 | Canola | nucleus | 16.89 | 19.87 |
| CDY15132 | Canola | nucleus | 11.44 | 18.03 |
| CDY47812 | Canola | nucleus | 23.43 | 16.67 |
| CDY22356 | Canola | nucleus | 23.16 | 16.38 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 1.36 | 8.62 |
Protein Annotations
| MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:A0A078FR67 | UniProt:A0A078FR67 | EnsemblPlants:CDY14818 | ProteinID:CDY14818 |
| ProteinID:CDY14818.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00084692001 | InterPro:IPR004333 |
| InterPro:IPR036893 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF62 | InterPro:SBP_dom |
| InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI0004EEF2EF | SEG:seg | : | : |
Description
BnaC04g48150DBnaC04g48150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FR67]
Coordinates
chrLK032047:+:549151..551739
Molecular Weight (calculated)
40389.7 Da
IEP (calculated)
7.814
GRAVY (calculated)
-0.836
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MNMGSNSGQG LGLVQAESGG SSNESSSFSG GLMFGQKIYF EDGVGGSSSS GGSNRRVRGG GSGQSSQIPR CQVEGCGVDL TNAKGYYLRH RVCGMHSKTP
101: RVIVAGIEQR FCQQCSRFHQ LQEFDLEKRS CRRRLAGHNE RRRKPQPASL SVLSSRYGRI APSLYGNAET TMNGSFLGSQ DMSWTSSRTL DTRVMRRPVA
201: APSWQINPMD VFSQGSVSGG GGISFSSPEI MDTKPESYKG IGGESNCALS LLSNPHQPQD DNNNNNTWRT SSGFGPMTVT MAQPPPAPSQ HQYLNPPWVF
301: KDDDNNCPND MSPVLNLARF TETDTTMGEF ELSDHHQHQH QNRRQYMEDE NTRAYDSSSH HNNNWSL
101: RVIVAGIEQR FCQQCSRFHQ LQEFDLEKRS CRRRLAGHNE RRRKPQPASL SVLSSRYGRI APSLYGNAET TMNGSFLGSQ DMSWTSSRTL DTRVMRRPVA
201: APSWQINPMD VFSQGSVSGG GGISFSSPEI MDTKPESYKG IGGESNCALS LLSNPHQPQD DNNNNNTWRT SSGFGPMTVT MAQPPPAPSQ HQYLNPPWVF
301: KDDDNNCPND MSPVLNLARF TETDTTMGEF ELSDHHQHQH QNRRQYMEDE NTRAYDSSSH HNNNWSL
001: MEMGSNSGPG HGPGQAESGG SSTESSSFSG GLMFGQKIYF EDGGGGSGSS SSGGRSNRRV RGGGSGQSGQ IPRCQVEGCG MDLTNAKGYY SRHRVCGVHS
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
Arabidopsis Description
SPL9Squamosa promoter-binding-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q700W2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.