Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G144900.1 | Wheat | nucleus | 96.1 | 95.85 |
| TraesCS7A01G246500.1 | Wheat | nucleus | 95.58 | 95.34 |
| Os09t0491532-01 | Rice | nucleus | 52.47 | 62.54 |
| Zm00001d020941_P001 | Maize | nucleus | 59.74 | 60.85 |
| EER99092 | Sorghum | nucleus | 60.26 | 59.79 |
| Os08t0509600-01 | Rice | nucleus | 63.64 | 58.75 |
| Zm00001d006028_P001 | Maize | nucleus | 56.62 | 56.92 |
| TraesCS5D01G273900.2 | Wheat | nucleus | 56.36 | 53.19 |
| GSMUA_Achr7P02020_001 | Banana | nucleus | 43.9 | 48.84 |
| TraesCS2D01G232800.1 | Wheat | nucleus | 18.18 | 36.46 |
| KRG95361 | Soybean | nucleus | 33.51 | 35.93 |
| KRH67040 | Soybean | nucleus | 32.99 | 34.6 |
| VIT_08s0007g06270.t01 | Wine grape | nucleus | 32.73 | 33.25 |
| KRH38141 | Soybean | nucleus, plastid | 31.69 | 32.71 |
| KRH71914 | Soybean | nucleus, plastid | 29.87 | 32.12 |
| PGSC0003DMT400029751 | Potato | nucleus | 30.13 | 31.18 |
| Solyc10g078700.1.1 | Tomato | nucleus | 29.87 | 30.91 |
| CDX98259 | Canola | nucleus | 24.94 | 29.54 |
| CDX79888 | Canola | nucleus | 28.05 | 29.35 |
| AT2G42200.1 | Thale cress | nucleus | 28.57 | 29.33 |
| CDY06881 | Canola | nucleus | 27.53 | 29.2 |
| Bra016891.1-P | Field mustard | nucleus | 27.53 | 29.2 |
| CDY14818 | Canola | nucleus | 27.79 | 29.16 |
| CDY53504 | Canola | nucleus | 27.79 | 28.92 |
| Bra004674.1-P | Field mustard | nucleus | 27.01 | 28.18 |
| Bra003305.1-P | Field mustard | nucleus | 23.12 | 28.16 |
| CDY61750 | Canola | nucleus | 22.34 | 27.92 |
| CDY47656 | Canola | nucleus | 23.38 | 27.78 |
| CDX67715 | Canola | nucleus | 22.6 | 27.53 |
| AT3G57920.1 | Thale cress | nucleus | 24.16 | 26.27 |
| Bra014599.1-P | Field mustard | nucleus | 20.26 | 25.83 |
| TraesCS2D01G410700.1 | Wheat | nucleus | 23.64 | 25.63 |
| TraesCS7D01G482300.1 | Wheat | nucleus | 20.0 | 24.29 |
| TraesCS6D01G145200.1 | Wheat | nucleus | 20.26 | 24.0 |
| TraesCS2D01G502900.2 | Wheat | nucleus | 23.12 | 21.87 |
| TraesCS3D01G425800.1 | Wheat | nucleus | 23.38 | 21.48 |
| TraesCS7D01G261500.1 | Wheat | nucleus | 22.6 | 21.01 |
| TraesCS7D01G482400.1 | Wheat | nucleus | 20.52 | 20.36 |
| TraesCS7D01G482500.1 | Wheat | nucleus | 21.04 | 19.47 |
| TraesCS5D01G294400.1 | Wheat | nucleus | 21.56 | 19.21 |
| TraesCS7D01G482200.1 | Wheat | nucleus | 20.0 | 18.87 |
| TraesCS6D01G098500.1 | Wheat | nucleus | 23.12 | 18.82 |
| TraesCS6D01G142100.1 | Wheat | nucleus | 19.48 | 16.59 |
| TraesCS4D01G332700.1 | Wheat | nucleus | 5.19 | 9.13 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G245200.2 | EnsemblPlantsGene:TraesCS7D01G245200 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR004333 |
| InterPro:IPR036893 | InterPro:SBP_dom | InterPro:SBP_sf | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF67 | PFAM:PF03110 |
| PFscan:PS51141 | SEG:seg | SUPFAM:SSF103612 | MapMan:15.5.18 | : | : |
Description
No Description!
Coordinates
chr7D:-:213787076..213790938
Molecular Weight (calculated)
40207.5 Da
IEP (calculated)
9.076
GRAVY (calculated)
-0.759
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIGSGGDGS GGGGGDDQQR HGLKFGKKIY FEDATGTGGG SGSGGVNASL SKPPAGSGRK GKAVAAGGAS GSAPPRCQVE GCGVDLSGAK QYHSRHKVCS
101: MHTKEPRVVV AGLEQRFCQQ CSRFHQLPEF DQGKRSCRRR LAGHNERRRK APPGPLATRY GRLAASFEEP GRFRSYLLDF SYPRVPSSVR DAWPGARPGY
201: RMPGEIQWQG NLDLRPHTGA ATGYHGHHAY SSHGGGFPGP ELPPSGCLAG VAADSSCALS LLSTQPWDNT PHGASHDHRS AGFDGHPVGV SPSIMASNYM
301: PPPASPWGGS RGHEGGRNAP HQQLPHDVPL HEAHHPAGSS QHGHFSGELE LALQGNRPAP GPRGGDHSSG GGAFDHPGSS SNWSL
101: MHTKEPRVVV AGLEQRFCQQ CSRFHQLPEF DQGKRSCRRR LAGHNERRRK APPGPLATRY GRLAASFEEP GRFRSYLLDF SYPRVPSSVR DAWPGARPGY
201: RMPGEIQWQG NLDLRPHTGA ATGYHGHHAY SSHGGGFPGP ELPPSGCLAG VAADSSCALS LLSTQPWDNT PHGASHDHRS AGFDGHPVGV SPSIMASNYM
301: PPPASPWGGS RGHEGGRNAP HQQLPHDVPL HEAHHPAGSS QHGHFSGELE LALQGNRPAP GPRGGDHSSG GGAFDHPGSS SNWSL
001: MEMGSNSGPG HGPGQAESGG SSTESSSFSG GLMFGQKIYF EDGGGGSGSS SSGGRSNRRV RGGGSGQSGQ IPRCQVEGCG MDLTNAKGYY SRHRVCGVHS
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
101: KTPKVTVAGI EQRFCQQCSR FHQLPEFDLE KRSCRRRLAG HNERRRKPQP ASLSVLASRY GRIAPSLYEN GDAGMNGSFL GNQEIGWPSS RTLDTRVMRR
201: PVSSPSWQIN PMNVFSQGSV GGGGTSFSSP EIMDTKLESY KGIGDSNCAL SLLSNPHQPH DNNNNNNNNN NNNNNTWRAS SGFGPMTVTM AQPPPAPSQH
301: QYLNPPWVFK DNDNDMSPVL NLGRYTEPDN CQISSGTAMG EFELSDHHHQ SRRQYMEDEN TRAYDSSSHH TNWSL
Arabidopsis Description
SPL9Squamosa promoter-binding-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q700W2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.