Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G294400.1 | Wheat | nucleus | 44.75 | 22.69 |
| GSMUA_Achr7P22940_001 | Banana | nucleus, vacuole | 25.57 | 17.55 |
| TraesCS7D01G261500.1 | Wheat | nucleus | 32.88 | 17.39 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.37 | 14.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.83 | 13.44 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.72 | 11.61 |
| GSMUA_Achr5P25090_001 | Banana | nucleus | 21.0 | 11.14 |
| GSMUA_Achr4P16050_001 | Banana | nucleus | 16.89 | 10.28 |
| VIT_14s0068g01780.t01 | Wine grape | nucleus | 17.35 | 10.05 |
| GSMUA_Achr11P... | Banana | nucleus | 17.81 | 9.4 |
| TraesCS3D01G425800.1 | Wheat | nucleus | 17.81 | 9.31 |
| KRH06918 | Soybean | nucleus | 15.07 | 9.04 |
| KRG94562 | Soybean | nucleus | 13.7 | 8.22 |
| TraesCS5D01G273900.2 | Wheat | nucleus | 11.87 | 6.37 |
| TraesCS7D01G245200.2 | Wheat | nucleus | 9.13 | 5.19 |
| TraesCS2D01G410700.1 | Wheat | nucleus | 8.22 | 5.07 |
| TraesCS6D01G145200.1 | Wheat | nucleus | 7.31 | 4.92 |
| TraesCS6D01G098500.1 | Wheat | nucleus | 10.5 | 4.86 |
| TraesCS7D01G482500.1 | Wheat | nucleus | 9.13 | 4.81 |
| TraesCS7D01G482300.1 | Wheat | nucleus | 6.85 | 4.73 |
| TraesCS6D01G142100.1 | Wheat | nucleus | 8.68 | 4.2 |
| TraesCS7D01G482400.1 | Wheat | nucleus | 7.31 | 4.12 |
| TraesCS7D01G482200.1 | Wheat | nucleus | 7.31 | 3.92 |
| TraesCS2D01G502900.2 | Wheat | nucleus | 6.39 | 3.44 |
| TraesCS2D01G232800.1 | Wheat | nucleus | 2.74 | 3.12 |
| CDX80286 | Canola | cytosol, nucleus, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G332700.1 | EnsemblPlantsGene:TraesCS4D01G332700 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF33 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr4D:-:490139847..490141422
Molecular Weight (calculated)
23560.2 Da
IEP (calculated)
3.986
GRAVY (calculated)
-0.187
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTQQETSLA SFSAPRAEPS WSGIIKYDDS NPYYTHEVLS KSRQNFTGST SSDTMEGWHF PFLHEGDPMS FSAGAAALEI PVCQPLLMAV TPPPPESSSS
101: IVLSSDCVLS ILSSPANSSS MDITQMVRPS EQIPSVAQQC LVPDQQFSSS SWFACSQASS GVCTAAGFAA LPSMDIEQLN TGAQVLSWND NEMNCHGIFH
201: VGADGYSEGT SPYFQFSWQ
101: IVLSSDCVLS ILSSPANSSS MDITQMVRPS EQIPSVAQQC LVPDQQFSSS SWFACSQASS GVCTAAGFAA LPSMDIEQLN TGAQVLSWND NEMNCHGIFH
201: VGADGYSEGT SPYFQFSWQ
001: MALESNAPVV DPNTIGNSFV EKYYNLLYKS PSQVHQFYLD DSVLGRPGSD GEMVSVKSLK AINEQIMSFD YEISKIQILT ADSQASYMNG VVTLVTGLLT
101: VKEGQRMRFS QSFFLVPLNG SYFVLNDVFR YVADEIVEPE ANKKEVEEVI PQVVQPTEQV DEVAEPVTIP TQQPEAKQTT ENTVKKPERA VANGHPKTQE
201: DNVVNDKSNG VDAPKKSFAH IVQDLAQNGA TFNAKASPAK PKSKPVTKPS AARESKAPAP VSEHSSAATI DQQAEGYTIF VANLLMDATP EQLNETFKGF
301: GAITKDGIQV RSYRLKGNCF GFVTFASAEA VKLVLQAHKE SAIRIGNRRV SIEEKRGNND NGRPAMRNGG YRNDNGYRND GYRPRGNGSN GGRGYGRNGS
401: ERRGESRNGE AHNGDGKVHQ NGTVEASR
101: VKEGQRMRFS QSFFLVPLNG SYFVLNDVFR YVADEIVEPE ANKKEVEEVI PQVVQPTEQV DEVAEPVTIP TQQPEAKQTT ENTVKKPERA VANGHPKTQE
201: DNVVNDKSNG VDAPKKSFAH IVQDLAQNGA TFNAKASPAK PKSKPVTKPS AARESKAPAP VSEHSSAATI DQQAEGYTIF VANLLMDATP EQLNETFKGF
301: GAITKDGIQV RSYRLKGNCF GFVTFASAEA VKLVLQAHKE SAIRIGNRRV SIEEKRGNND NGRPAMRNGG YRNDNGYRND GYRPRGNGSN GGRGYGRNGS
401: ERRGESRNGE AHNGDGKVHQ NGTVEASR
Arabidopsis Description
At1g13730 [Source:UniProtKB/TrEMBL;Acc:Q9LMX6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.