Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G494800.1 | Wheat | nucleus | 79.17 | 80.95 |
| TraesCS7D01G482400.1 | Wheat | nucleus | 76.47 | 80.41 |
| TraesCS7D01G482300.1 | Wheat | nucleus | 61.76 | 79.5 |
| TraesCS7D01G482500.1 | Wheat | nucleus | 76.47 | 75.0 |
| HORVU7Hr1G110980.3 | Barley | nucleus, plastid | 73.28 | 66.59 |
| Os06t0659100-00 | Rice | nucleus | 60.29 | 57.75 |
| Zm00001d046906_P001 | Maize | nucleus | 58.58 | 56.37 |
| EER88765 | Sorghum | nucleus | 61.27 | 56.31 |
| Zm00001d036692_P001 | Maize | nucleus | 57.6 | 54.15 |
| Bra032662.1-P | Field mustard | nucleus | 15.93 | 41.14 |
| TraesCS6D01G142100.1 | Wheat | nucleus | 43.87 | 39.6 |
| TraesCS2D01G232800.1 | Wheat | nucleus | 16.67 | 35.42 |
| GSMUA_Achr10P... | Banana | nucleus | 19.61 | 35.09 |
| GSMUA_Achr3P00810_001 | Banana | nucleus | 21.57 | 34.51 |
| GSMUA_Achr4P20590_001 | Banana | nucleus | 22.79 | 34.19 |
| GSMUA_Achr7P05010_001 | Banana | nucleus | 21.81 | 32.48 |
| KRH75288 | Soybean | nucleus | 20.83 | 29.62 |
| PGSC0003DMT400074976 | Potato | nucleus | 20.83 | 29.01 |
| Solyc10g018780.1.1 | Tomato | nucleus | 20.83 | 29.01 |
| VIT_15s0021g02300.t01 | Wine grape | nucleus | 21.57 | 28.95 |
| PGSC0003DMT400066955 | Potato | nucleus | 21.32 | 28.81 |
| Solyc01g090730.2.1 | Tomato | nucleus | 21.08 | 28.76 |
| GSMUA_Achr7P08750_001 | Banana | nucleus | 24.75 | 28.53 |
| KRH66611 | Soybean | nucleus | 23.04 | 27.98 |
| KRH48747 | Soybean | nucleus | 23.04 | 27.81 |
| CDX90071 | Canola | nucleus | 21.08 | 27.56 |
| CDY38043 | Canola | nucleus | 22.3 | 27.16 |
| Bra033221.1-P | Field mustard | nucleus | 21.81 | 27.13 |
| AT1G02065.1 | Thale cress | nucleus | 21.32 | 26.13 |
| KRH07602 | Soybean | nucleus | 13.48 | 25.46 |
| CDY15132 | Canola | nucleus | 14.46 | 25.32 |
| TraesCS2D01G502900.2 | Wheat | nucleus | 25.0 | 25.06 |
| TraesCS2D01G410700.1 | Wheat | nucleus | 18.63 | 21.41 |
| TraesCS7D01G261500.1 | Wheat | nucleus | 21.32 | 21.01 |
| TraesCS5D01G273900.2 | Wheat | nucleus | 20.83 | 20.83 |
| TraesCS6D01G145200.1 | Wheat | nucleus | 15.93 | 20.0 |
| TraesCS7D01G245200.2 | Wheat | nucleus | 18.87 | 20.0 |
| TraesCS5D01G294400.1 | Wheat | nucleus | 21.08 | 19.91 |
| TraesCS3D01G425800.1 | Wheat | nucleus | 20.1 | 19.57 |
| TraesCS6D01G098500.1 | Wheat | nucleus | 18.38 | 15.86 |
| TraesCS4D01G332700.1 | Wheat | nucleus | 3.92 | 7.31 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G482200.1 | EnsemblPlantsGene:TraesCS7D01G482200 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR004333 |
| InterPro:IPR036893 | InterPro:SBP_dom | InterPro:SBP_sf | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF34 | PFAM:PF03110 |
| PFscan:PS51141 | SEG:seg | SUPFAM:SSF103612 | MapMan:15.5.18 | : | : |
Description
No Description!
Coordinates
chr7D:+:592632322..592634232
Molecular Weight (calculated)
44135.7 Da
IEP (calculated)
10.365
GRAVY (calculated)
-0.547
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNGRMNAAA GDDLPLGAMQ PPPYVGFELA GMMAGGGGGG QRHEGAMISD NFDFAAAATA FNRLREAPHH QMLALPPNGN GTGGLVLMAP PPMSRMQLQM
101: PPMAMDGHSD VYPALGMVKR EVGAGDEGRI GLNHGRRTYF PTGDMMAVDR MLMRSRLGSV FGLGFGRAHR QPPQCQVEDC KADLSGAKHY HRRHKVCEYH
201: AKASLVSAAG KQQRFCQQCS RFHVLTEFDE AKRSCRKRLA EHNHRRSKPA AGSARAASKV LAPPSKKPNA SGISSSYATN NNTLSATNKS TISSNTSATS
301: CLKQVQASVA TARRMTLTLG VPPEKERRQQ QLSNAMQLHH QREQQHFITS LLHRNVNNSN IMSCSSVCSS TMPSVAAANG RVSDQNNNNT NGSNQANNSM
401: LMFEVDFM
101: PPMAMDGHSD VYPALGMVKR EVGAGDEGRI GLNHGRRTYF PTGDMMAVDR MLMRSRLGSV FGLGFGRAHR QPPQCQVEDC KADLSGAKHY HRRHKVCEYH
201: AKASLVSAAG KQQRFCQQCS RFHVLTEFDE AKRSCRKRLA EHNHRRSKPA AGSARAASKV LAPPSKKPNA SGISSSYATN NNTLSATNKS TISSNTSATS
301: CLKQVQASVA TARRMTLTLG VPPEKERRQQ QLSNAMQLHH QREQQHFITS LLHRNVNNSN IMSCSSVCSS TMPSVAAANG RVSDQNNNNT NGSNQANNSM
401: LMFEVDFM
001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
Arabidopsis Description
SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.