Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g090730.2.1 | Tomato | nucleus | 93.71 | 94.65 |
| PGSC0003DMT400074976 | Potato | nucleus | 53.31 | 54.95 |
| Bra032662.1-P | Field mustard | nucleus | 28.48 | 54.43 |
| VIT_15s0021g02300.t01 | Wine grape | nucleus | 53.97 | 53.62 |
| KRH66611 | Soybean | nucleus | 53.64 | 48.21 |
| KRH48747 | Soybean | nucleus | 53.64 | 47.93 |
| KRH75288 | Soybean | nucleus | 42.05 | 44.25 |
| CDX90071 | Canola | nucleus | 45.7 | 44.23 |
| Bra033221.1-P | Field mustard | nucleus | 47.35 | 43.6 |
| AT1G02065.1 | Thale cress | nucleus | 47.68 | 43.24 |
| PGSC0003DMT400058753 | Potato | nucleus | 19.21 | 42.96 |
| PGSC0003DMT400076399 | Potato | nucleus | 19.21 | 42.65 |
| CDY38043 | Canola | nucleus | 46.36 | 41.79 |
| CDY15132 | Canola | nucleus | 32.12 | 41.63 |
| KRH07602 | Soybean | nucleus | 27.81 | 38.89 |
| PGSC0003DMT400085174 | Potato | nucleus | 16.23 | 36.84 |
| PGSC0003DMT400082789 | Potato | nucleus | 19.87 | 36.36 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 31.79 | 30.19 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 31.46 | 28.96 |
| TraesCS7D01G482300.1 | Wheat | nucleus | 27.48 | 26.18 |
| TraesCS7D01G482400.1 | Wheat | nucleus | 29.8 | 23.2 |
| TraesCS7B01G402300.1 | Wheat | nucleus | 29.8 | 23.08 |
| TraesCS7A01G494900.1 | Wheat | nucleus | 29.47 | 22.59 |
| TraesCS7A01G495100.1 | Wheat | nucleus | 31.13 | 22.43 |
| TraesCS7B01G402200.1 | Wheat | nucleus | 30.79 | 22.3 |
| TraesCS7B01G402400.1 | Wheat | nucleus | 29.47 | 22.19 |
| TraesCS7D01G482500.1 | Wheat | nucleus | 30.46 | 22.12 |
| Zm00001d046906_P001 | Maize | nucleus | 30.79 | 21.93 |
| TraesCS7A01G495000.1 | Wheat | nucleus | 29.47 | 21.92 |
| TraesCS7A01G494800.1 | Wheat | nucleus | 28.48 | 21.55 |
| TraesCS7D01G482200.1 | Wheat | nucleus | 28.81 | 21.32 |
| EES11579 | Sorghum | nucleus | 28.15 | 21.25 |
| Zm00001d053756_P001 | Maize | nucleus | 28.48 | 21.18 |
| Os06t0659100-00 | Rice | nucleus | 29.8 | 21.13 |
| Zm00001d015451_P001 | Maize | nucleus | 30.79 | 21.09 |
| Zm00001d002005_P001 | Maize | nucleus | 27.81 | 21.05 |
| EER88765 | Sorghum | nucleus | 30.79 | 20.95 |
| OQU84482 | Sorghum | nucleus | 30.79 | 20.9 |
| TraesCS2D01G502900.2 | Wheat | nucleus | 28.15 | 20.88 |
| TraesCS2B01G530400.1 | Wheat | nucleus | 28.15 | 20.83 |
| TraesCS6B01G180300.1 | Wheat | nucleus | 30.46 | 20.81 |
| TraesCS6D01G142100.1 | Wheat | nucleus | 31.13 | 20.8 |
| Zm00001d026491_P001 | Maize | nucleus | 27.15 | 20.71 |
| TraesCS2A01G502300.1 | Wheat | nucleus | 28.15 | 20.63 |
| TraesCS6A01G152000.1 | Wheat | nucleus | 30.46 | 20.54 |
| Zm00001d036692_P001 | Maize | nucleus | 29.47 | 20.51 |
| Os04t0656500-01 | Rice | nucleus | 27.81 | 20.19 |
| HORVU7Hr1G110980.3 | Barley | nucleus, plastid | 29.14 | 19.6 |
| PGSC0003DMT400029751 | Potato | nucleus | 23.84 | 19.35 |
| Os02t0177300-00 | Rice | nucleus | 29.8 | 19.23 |
| PGSC0003DMT400056374 | Potato | nucleus | 20.2 | 19.12 |
| HORVU6Hr1G030490.2 | Barley | nucleus, plastid | 30.13 | 18.53 |
| PGSC0003DMT400059813 | Potato | nucleus | 27.15 | 17.98 |
| PGSC0003DMT400068752 | Potato | nucleus | 20.86 | 16.36 |
| PGSC0003DMT400084734 | Potato | nucleus | 23.84 | 15.48 |
| PGSC0003DMT400072745 | Potato | nucleus | 25.17 | 13.62 |
| PGSC0003DMT400063046 | Potato | nucleus | 22.85 | 13.37 |
| HORVU2Hr1G111620.1 | Barley | cytosol, nucleus | 1.32 | 6.25 |
Protein Annotations
| EntrezGene:102583729 | MapMan:15.5.18 | Gene3D:4.10.1100.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046872 |
| InterPro:IPR004333 | InterPro:IPR036893 | UniProt:M1CGF7 | PFAM:PF03110 | EnsemblPlantsGene:PGSC0003DMG400026027 | PGSC:PGSC0003DMG400026027 |
| EnsemblPlants:PGSC0003DMT400066955 | PFscan:PS51141 | PANTHER:PTHR31251 | PANTHER:PTHR31251:SF4 | InterPro:SBP_dom | InterPro:SBP_sf |
| SUPFAM:SSF103612 | UniParc:UPI0002958F7E | RefSeq:XP_006348003.1 | SEG:seg | : | : |
Description
LIGULELESS1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400026027]
Coordinates
chr1:+:69939727..69942519
Molecular Weight (calculated)
34425.6 Da
IEP (calculated)
9.167
GRAVY (calculated)
-1.008
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDYEWENQS AFMFTSDQNT QEENDQNNNQ FLDPQAHFPH ITNYQHQQQQ QQQQLQNPQF PQFQATPNNT HLISSMYDPR AYGVSYTQTH ETSMLSLQPT
101: GGFMVVPKSE PQFGGGIHDF SSSSSRIGLN LGGRTYFASS SEDDFVNRLY RRTREVDSGS VNSPKCQAEG CNADLTHAKH YHRRHKVCEF HSKAATVIAA
201: GLTQRFCQQC SRFHVLSEFD NGKRSCRKRL ADHNRRRRKN IQQENNKKQS QPSSKSRAES GAQSSTVTVA ISPPRIPVDG FRQRTYQQVT TTTSSPIYFS
301: NG
101: GGFMVVPKSE PQFGGGIHDF SSSSSRIGLN LGGRTYFASS SEDDFVNRLY RRTREVDSGS VNSPKCQAEG CNADLTHAKH YHRRHKVCEF HSKAATVIAA
201: GLTQRFCQQC SRFHVLSEFD NGKRSCRKRL ADHNRRRRKN IQQENNKKQS QPSSKSRAES GAQSSTVTVA ISPPRIPVDG FRQRTYQQVT TTTSSPIYFS
301: NG
001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
Arabidopsis Description
SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.