Factsheet for Bra032662.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005470.1-P	Field mustard	nucleus	36.08	40.14
CDX90071	Canola	nucleus	76.58	38.78
AT1G02065.1	Thale cress	nucleus	80.38	38.14
Bra033221.1-P	Field mustard	nucleus	79.11	38.11
Bra021880.1-P	Field mustard	nucleus	32.91	36.88
Bra039656.1-P	Field mustard	nucleus	36.08	31.67
VIT_15s0021g02300.t01	Wine grape	nucleus	60.76	31.58
PGSC0003DMT400074976	Potato	nucleus	57.59	31.06
Bra027265.1-P	Field mustard	nucleus	34.81	30.73
Bra021094.1-P	Field mustard	nucleus	34.18	30.68
Bra038101.1-P	Field mustard	nucleus	35.44	30.6
Solyc10g018780.1.1	Tomato	nucleus	56.33	30.38
Solyc01g090730.2.1	Tomato	nucleus	56.33	29.77
PGSC0003DMT400066955	Potato	nucleus	54.43	28.48
KRH75288	Soybean	nucleus	50.0	27.53
KRH66611	Soybean	nucleus	56.96	26.79
KRH48747	Soybean	nucleus	55.7	26.04
CDY15132	Canola	nucleus	34.81	23.61
GSMUA_Achr2P11940_001	Banana	nucleus	43.67	21.7
GSMUA_Achr4P24610_001	Banana	nucleus	44.3	21.34
TraesCS7D01G482300.1	Wheat	nucleus	41.77	20.82
Bra004363.1-P	Field mustard	nucleus	38.61	20.27
Bra038324.1-P	Field mustard	nucleus	37.97	18.4
Zm00001d002005_P001	Maize	nucleus	45.57	18.05
EES11579	Sorghum	nucleus	45.57	18.0
Zm00001d026491_P001	Maize	nucleus	44.3	17.68
KRH07602	Soybean	nucleus	24.05	17.59
TraesCS2A01G502300.1	Wheat	nucleus	45.57	17.48
TraesCS2D01G502900.2	Wheat	nucleus	44.94	17.44
TraesCS2B01G530400.1	Wheat	nucleus	44.94	17.4
TraesCS7D01G482400.1	Wheat	nucleus	42.41	17.27
TraesCS7D01G482500.1	Wheat	nucleus	44.3	16.83
Os04t0656500-01	Rice	nucleus	44.3	16.83
Zm00001d053756_P001	Maize	nucleus	43.04	16.75
TraesCS7B01G402200.1	Wheat	nucleus	43.67	16.55
TraesCS7A01G495000.1	Wheat	nucleus	42.41	16.5
TraesCS7A01G495100.1	Wheat	nucleus	43.67	16.47
TraesCS7B01G402400.1	Wheat	nucleus	41.77	16.46
TraesCS7B01G402300.1	Wheat	nucleus	40.51	16.41
TraesCS7A01G494900.1	Wheat	nucleus	40.51	16.24
Bra032823.1-P	Field mustard	nucleus	33.54	16.16
TraesCS7A01G494800.1	Wheat	nucleus	40.51	16.04
Zm00001d046906_P001	Maize	nucleus	43.04	16.04
EER88765	Sorghum	nucleus	44.94	15.99
Os06t0659100-00	Rice	nucleus	43.04	15.96
TraesCS7D01G482200.1	Wheat	nucleus	41.14	15.93
Bra003305.1-P	Field mustard	nucleus	31.65	15.82
Bra022766.1-P	Field mustard	nucleus	34.18	15.79
Zm00001d015451_P001	Maize	nucleus	43.67	15.65
Bra014599.1-P	Field mustard	nucleus	29.75	15.56
Zm00001d036692_P001	Maize	nucleus	42.41	15.44
TraesCS6A01G152000.1	Wheat	nucleus	43.04	15.18
TraesCS6B01G180300.1	Wheat	nucleus	42.41	15.16
TraesCS6D01G142100.1	Wheat	nucleus	43.04	15.04
Bra016891.1-P	Field mustard	nucleus	34.18	14.88
Bra033671.1-P	Field mustard	nucleus	33.54	14.64
Bra004674.1-P	Field mustard	nucleus	34.18	14.63
OQU84482	Sorghum	nucleus	41.14	14.61
Bra027478.1-P	Field mustard	nucleus	35.44	14.36
Bra010949.1-P	Field mustard	nucleus	32.91	14.21
HORVU7Hr1G110980.3	Barley	nucleus, plastid	39.87	14.03
HORVU6Hr1G030490.2	Barley	nucleus, plastid	43.04	13.85
Os02t0177300-00	Rice	nucleus	40.51	13.68
Bra030041.1-P	Field mustard	nucleus	32.28	13.64
Bra032822.1-P	Field mustard	nucleus	31.01	13.42
Bra030040.1-P	Field mustard	nucleus	31.65	12.82
HORVU2Hr1G111620.1	Barley	cytosol, nucleus	0.0	0.0

Protein Annotations

MapMan:15.5.18	Gene3D:4.10.1100.10	EnsemblPlantsGene:Bra032662	EnsemblPlants:Bra032662.1	EnsemblPlants:Bra032662.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0046872	InterPro:IPR004333	InterPro:IPR036893	UniProt:M4EV29	PFAM:PF03110
PFscan:PS51141	PANTHER:PTHR31251	PANTHER:PTHR31251:SF4	InterPro:SBP_dom	InterPro:SBP_sf	SUPFAM:SSF103612
UniParc:UPI00025431C8	SEG:seg	:	:	:	:

Description

AT1G02065 (E=5e-060) SPL8 | SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8); DNA binding

Coordinates

chrA09:+:37065249..37066398

Molecular Weight (calculated)

17514.5 Da

IEP (calculated)

10.737

GRAVY (calculated)

-0.763

Length

158 amino acids

Sequence
(BLAST)

001: MGNSLSTTLT PRCQAERCNA DLSHAKHYHR RHKVCEFHSK ASTVVAAGLS QRFCQQCSRF HLLSEFDNGK RSCRKRLADH NRRRRKCHQS ASTSGKHIPD
101: IITTPKSAND SGVKSSSASP SNAPTPISLE CFRQRQFQTT PSSSTSAIWG SLAPAYNL

Best Arabidopsis Sequence Match ( AT1G02065.1 )
(BLAST)

001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG

Arabidopsis Description

SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.