Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH48747 | Soybean | nucleus | 94.94 | 94.38 |
| KRH07602 | Soybean | nucleus | 52.68 | 81.94 |
| KRH75288 | Soybean | nucleus | 55.65 | 65.16 |
| VIT_15s0021g02300.t01 | Wine grape | nucleus | 58.33 | 64.47 |
| Bra032662.1-P | Field mustard | nucleus | 26.79 | 56.96 |
| PGSC0003DMT400074976 | Potato | nucleus | 47.92 | 54.95 |
| Solyc10g018780.1.1 | Tomato | nucleus | 47.32 | 54.27 |
| Solyc01g090730.2.1 | Tomato | nucleus | 47.92 | 53.85 |
| PGSC0003DMT400066955 | Potato | nucleus | 48.21 | 53.64 |
| CDX90071 | Canola | nucleus | 47.02 | 50.64 |
| Bra033221.1-P | Field mustard | nucleus | 49.4 | 50.61 |
| AT1G02065.1 | Thale cress | nucleus | 49.4 | 49.85 |
| KRH21401 | Soybean | nucleus | 19.94 | 48.55 |
| KRH20415 | Soybean | nucleus | 20.24 | 47.89 |
| CDY38043 | Canola | nucleus | 47.32 | 47.46 |
| KRH10909 | Soybean | nucleus | 19.05 | 46.38 |
| CDY15132 | Canola | nucleus | 32.14 | 46.35 |
| KRH50085 | Soybean | nucleus | 19.35 | 44.52 |
| KRH28893 | Soybean | nucleus | 15.48 | 35.62 |
| KRH27270 | Soybean | nucleus | 19.64 | 35.29 |
| KRH22053 | Soybean | nucleus | 19.64 | 35.29 |
| KRG88838 | Soybean | nucleus | 19.64 | 34.74 |
| KRH55227 | Soybean | nucleus | 19.05 | 34.59 |
| KRH22367 | Soybean | nucleus | 15.48 | 32.91 |
| GSMUA_Achr4P24610_001 | Banana | nucleus | 31.55 | 32.32 |
| GSMUA_Achr2P11940_001 | Banana | nucleus | 30.36 | 32.08 |
| KRG88952 | Soybean | nucleus | 19.94 | 29.91 |
| TraesCS7D01G482300.1 | Wheat | nucleus | 26.49 | 28.08 |
| TraesCS7A01G494900.1 | Wheat | nucleus | 29.17 | 24.87 |
| TraesCS7B01G402300.1 | Wheat | nucleus | 28.87 | 24.87 |
| TraesCS7D01G482400.1 | Wheat | nucleus | 28.27 | 24.48 |
| TraesCS7D01G482500.1 | Wheat | nucleus | 29.76 | 24.04 |
| EES11579 | Sorghum | nucleus | 28.57 | 24.0 |
| TraesCS6B01G180300.1 | Wheat | nucleus | 31.55 | 23.98 |
| TraesCS7B01G402200.1 | Wheat | nucleus | 29.76 | 23.98 |
| Zm00001d002005_P001 | Maize | nucleus | 28.27 | 23.81 |
| TraesCS7B01G402400.1 | Wheat | nucleus | 28.27 | 23.69 |
| TraesCS6D01G142100.1 | Wheat | nucleus | 31.85 | 23.67 |
| TraesCS7A01G495100.1 | Wheat | nucleus | 29.46 | 23.63 |
| Zm00001d046906_P001 | Maize | nucleus | 29.76 | 23.58 |
| Os04t0656500-01 | Rice | nucleus | 29.17 | 23.56 |
| TraesCS6A01G152000.1 | Wheat | nucleus | 31.25 | 23.44 |
| TraesCS2D01G502900.2 | Wheat | nucleus | 28.27 | 23.34 |
| TraesCS2B01G530400.1 | Wheat | nucleus | 28.27 | 23.28 |
| TraesCS7A01G495000.1 | Wheat | nucleus | 27.98 | 23.15 |
| Zm00001d053756_P001 | Maize | nucleus | 27.98 | 23.15 |
| Zm00001d015451_P001 | Maize | nucleus | 30.36 | 23.13 |
| TraesCS2A01G502300.1 | Wheat | nucleus | 28.27 | 23.06 |
| TraesCS7A01G494800.1 | Wheat | nucleus | 27.38 | 23.06 |
| TraesCS7D01G482200.1 | Wheat | nucleus | 27.98 | 23.04 |
| Zm00001d026491_P001 | Maize | nucleus | 27.08 | 22.98 |
| OQU84482 | Sorghum | nucleus | 30.06 | 22.7 |
| Os06t0659100-00 | Rice | nucleus | 28.57 | 22.54 |
| EER88765 | Sorghum | nucleus | 29.76 | 22.52 |
| KRH75287 | Soybean | nucleus | 22.32 | 21.8 |
| Os02t0177300-00 | Rice | nucleus | 30.36 | 21.79 |
| Zm00001d036692_P001 | Maize | nucleus | 27.98 | 21.66 |
| KRH71914 | Soybean | nucleus, plastid | 22.92 | 21.51 |
| HORVU6Hr1G030490.2 | Barley | nucleus, plastid | 30.95 | 21.18 |
| HORVU7Hr1G110980.3 | Barley | nucleus, plastid | 28.27 | 21.16 |
| KRH48746 | Soybean | nucleus | 21.43 | 21.05 |
| KRH66613 | Soybean | nucleus | 21.13 | 20.76 |
| KRH38141 | Soybean | nucleus, plastid | 22.92 | 20.64 |
| KRG95361 | Soybean | nucleus | 22.02 | 20.61 |
| KRH63786 | Soybean | nucleus | 22.32 | 20.22 |
| KRH67040 | Soybean | nucleus | 21.73 | 19.89 |
| KRH59812 | Soybean | nucleus | 22.92 | 19.74 |
| KRH54164 | Soybean | nucleus | 24.11 | 19.57 |
| KRH41121 | Soybean | nucleus | 22.92 | 19.44 |
| KRH54739 | Soybean | nucleus | 21.13 | 18.68 |
| KRH06918 | Soybean | nucleus | 20.24 | 18.63 |
| KRG94562 | Soybean | nucleus | 20.24 | 18.63 |
| KRG97402 | Soybean | nucleus | 22.32 | 17.32 |
| KRH31506 | Soybean | nucleus | 21.73 | 16.48 |
| KRH75117 | Soybean | nucleus | 23.51 | 16.36 |
| KRH70968 | Soybean | nucleus | 23.21 | 16.18 |
| KRH56776 | Soybean | nucleus | 25.0 | 15.3 |
| KRH03167 | Soybean | nucleus | 24.7 | 15.26 |
| KRH63174 | Soybean | nucleus | 23.21 | 13.83 |
| HORVU2Hr1G111620.1 | Barley | cytosol, nucleus | 2.08 | 10.94 |
Protein Annotations
| EntrezGene:100802206 | MapMan:15.5.18 | Gene3D:4.10.1100.10 | EMBL:ACUP02001990 | EnsemblPlantsGene:GLYMA_03G117500 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0046872 | UniProt:I1JMV9 | InterPro:IPR004333 | InterPro:IPR036893 | ProteinID:KRH66610.1 |
| EnsemblPlants:KRH66611 | ProteinID:KRH66611 | ProteinID:KRH66611.1 | PFAM:PF03110 | PFscan:PS51141 | PANTHER:PTHR31251 |
| PANTHER:PTHR31251:SF4 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI0002339A7A | SEG:seg |
Description
hypothetical protein
Coordinates
chr3:+:32675128..32678106
Molecular Weight (calculated)
37078.7 Da
IEP (calculated)
8.814
GRAVY (calculated)
-0.801
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDYEWGNPS TIMLSGNEDS SAAGSDQTHR QIFDHYASHT LIPDHFLHAP THSTATTAAA ATVDFTHHHH FTPQPHHHNQ NHMNHHHHHA FFDPRAFHGA
101: SNTSYPPPHS MLSLDPLPHV NAVGPGHGPG SGPGGLLLVP KSEDVGRPMD FVGSRIGLNL GGRTYFSSSE DDFVSRLYRR SRPVEPGSTA SSNSPRCQAE
201: GCNADLSQAK HYHRRHKVCE FHSKAATVIA AGLTQRFCQQ CSRFHLLSEF DNGKRSCRKR LADHNRRRRK TQQPTQEIQK SQSSLENVAR SPPDSGAQSS
301: SSVTVAVSPP DYFRQRPYQS TNPSSTTSSS LFFSSG
101: SNTSYPPPHS MLSLDPLPHV NAVGPGHGPG SGPGGLLLVP KSEDVGRPMD FVGSRIGLNL GGRTYFSSSE DDFVSRLYRR SRPVEPGSTA SSNSPRCQAE
201: GCNADLSQAK HYHRRHKVCE FHSKAATVIA AGLTQRFCQQ CSRFHLLSEF DNGKRSCRKR LADHNRRRRK TQQPTQEIQK SQSSLENVAR SPPDSGAQSS
301: SSVTVAVSPP DYFRQRPYQS TNPSSTTSSS LFFSSG
001: MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
101: DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA
201: KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT
301: ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
Arabidopsis Description
SPL8Squamosa promoter-binding-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.