CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56776	Soybean	nucleus	93.93	93.08
KRH63174	Soybean	nucleus	74.08	71.45
KRH54739	Soybean	nucleus	46.51	66.58
VIT_17s0000g05020.t01	Wine grape	nucleus	59.19	57.81
Solyc12g038520.1.1	Tomato	nucleus	40.62	49.44
PGSC0003DMT400059813	Potato	nucleus	40.81	48.68
KRH21401	Soybean	nucleus	11.03	43.48
KRH10909	Soybean	nucleus	10.66	42.03
KRH20415	Soybean	nucleus	10.48	40.14
KRH28893	Soybean	nucleus	10.66	39.73
KRH50085	Soybean	nucleus	10.48	39.04
KRG88952	Soybean	nucleus	15.07	36.61
KRH22367	Soybean	nucleus	10.29	35.44
CDX95958	Canola	nucleus	18.93	34.45
KRH27270	Soybean	nucleus	11.76	34.22
Solyc03g114850.2.1	Tomato	nucleus	16.54	33.96
Bra004363.1-P	Field mustard	nucleus	18.75	33.89
KRH22053	Soybean	nucleus	11.58	33.69
KRG88838	Soybean	nucleus	11.58	33.16
KRH55227	Soybean	nucleus	11.21	32.97
Bra038324.1-P	Field mustard	nucleus	19.67	32.82
CDY50300	Canola	nucleus	19.67	32.62
CDX96251	Canola	nucleus	19.49	32.32
CDY69014	Canola	nucleus	18.75	31.97
CDX81606	Canola	nucleus	19.49	31.83
KRG94562	Soybean	nucleus	19.12	28.49
KRH70968	Soybean	nucleus	25.18	28.42
KRH06918	Soybean	nucleus	18.93	28.22
KRH75117	Soybean	nucleus	25.0	28.16
AT1G69170.1	Thale cress	nucleus	20.59	27.65
KRH75287	Soybean	nucleus	17.1	27.03
KRH59812	Soybean	nucleus	18.93	26.41
KRH41121	Soybean	nucleus	19.12	26.26
PGSC0003DMT400063046	Potato	nucleus	24.63	25.97
KRH71914	Soybean	nucleus, plastid	16.91	25.7
KRH63786	Soybean	nucleus	17.46	25.61
KRH48747	Soybean	nucleus	15.62	25.15
KRH66613	Soybean	nucleus	15.81	25.15
KRH48746	Soybean	nucleus	15.81	25.15
KRH75288	Soybean	nucleus	13.24	25.09
KRH38141	Soybean	nucleus, plastid	17.1	24.93
KRH66611	Soybean	nucleus	15.26	24.7
KRG95361	Soybean	nucleus	15.99	24.23
KRH54164	Soybean	nucleus	18.01	23.67
KRH67040	Soybean	nucleus	15.62	23.16
KRG97402	Soybean	nucleus	17.1	21.48
KRH31506	Soybean	nucleus	17.46	21.44
KRH07602	Soybean	nucleus	8.09	20.37

Protein Annotations

EntrezGene:100812110	MapMan:15.5.18	Gene3D:4.10.1100.10	EMBL:ACUP02010335	ncoils:Coil	EnsemblPlantsGene:GLYMA_17G080700
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0046872	InterPro:IPR004333	InterPro:IPR036893	UniProt:K7MKJ4
EnsemblPlants:KRH03167	ProteinID:KRH03167	ProteinID:KRH03167.1	PFAM:PF03110	PFscan:PS51141	PANTHER:PTHR31251
PANTHER:PTHR31251:SF22	InterPro:SBP_dom	InterPro:SBP_sf	SUPFAM:SSF103612	UniParc:UPI000295CF14	SEG:seg

Description

hypothetical protein

Coordinates

chr17:-:6263323..6266866

Molecular Weight (calculated)

59726.5 Da

IEP (calculated)

6.784

GRAVY (calculated)

-0.585

Length

544 amino acids

Sequence
(BLAST)

001: MESWSYIPEE KECVSNEAPS PPNTLGRSKN SFLGWELKTP CGFSTDMLGL GHHSIENQGF EELGFPEMLG KHMSDDLVAS VPTRKVDGNR QQQQHHSDRI
101: TGTVVDAPSG FSQRGDSNSL IDLKLGRFAE HGDFTDPAFS KVLSSSESST PPKRVRTSGL HSQTAYCQVY GCNKDLSSCK DYHKRHKVCE VHSKTAIVIV
201: NGIEQRFCQQ CSRFHLLAEF DDGKRSCRKR LAGHNERRRK PQMGIHPGKS GTLLQPCGDS RFQGSMLTSS FIRPEMLPSG VMCSEKYGMS DFWRPIKAEH
301: GTGFRNLSSM AATNGHPLPR SLFSSYNGKQ FPFLHENSST STTGSIFCES NSHYPSALGA QNSGLRPLFQ DTVGNEDFSV FDTSPNVQGL SGISDSCCAL
401: SLLSSQSQNS SSQSSGIPLA HSLVIPSSHS HHYNMSQVSD KIGISSQTSS SRVSDSFPPE LNHADGSHLS PVLISGNNDI INFDMADGIF QGSDYLNVKD
501: RLSDEDGATI DLLQLSSQLQ RVEHERQSLQ VKQENDSSCT LRIT

Best Arabidopsis Sequence Match ( AT1G69170.1 )
(BLAST)

001: MDSWSYGRSV FMSNETLLPC DTFAKNRRFE QRLSNNDDVL ISDMAGNSNG FSAVSITKVV PEEEDEENIS SSSKFSSQEL NRIDFKLRSF LDLGNDDDDT
101: SSRGFALPSK KSRASNLCSQ NPLCQVYGCS KDLSSSKDYH KRHRVCEAHS KTSVVIVNGL EQRFCQQCSR FHFLSEFDDG KRSCRRRLAG HNERRRKPAF
201: YFLPGKRHKL LRTSQDVVGN KFLENSSLVL PESFPGSLLY RVIDEDDHRT SRLVSFKDEP TCSMFPTNEQ NSSRTYESKP AIYSTEVSSI WDLHETAASR
301: STRALSLLSA QSQQHLSKFP NTTFSITQPN QNLNHSSSTD YHQMEQPLWI DPGKTNSAGS SSCKGKGTST VDLLQLSSHL QRIEQQRNYT GDVKQEYNEL
401: YFPGS

Arabidopsis Description

SPL6Squamosa promoter-binding-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q94JW8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.