Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH63786 | Soybean | nucleus | 82.61 | 92.18 |
| KRH41121 | Soybean | nucleus | 62.32 | 65.15 |
| KRH59812 | Soybean | nucleus | 60.87 | 64.62 |
| VIT_17s0000g01260.t01 | Wine grape | nucleus | 49.52 | 51.12 |
| KRH21401 | Soybean | nucleus | 14.73 | 44.2 |
| AT5G50670.2 | Thale cress | nucleus | 37.92 | 43.73 |
| AT5G50570.2 | Thale cress | nucleus | 37.92 | 43.73 |
| KRH10909 | Soybean | nucleus | 14.49 | 43.48 |
| KRH20415 | Soybean | nucleus | 14.73 | 42.96 |
| CDY45826 | Canola | nucleus | 34.54 | 41.94 |
| CDX71667 | Canola | nucleus | 36.23 | 41.78 |
| CDY34028 | Canola | nucleus | 35.02 | 41.67 |
| CDX84872 | Canola | nucleus | 34.3 | 41.64 |
| Bra022766.1-P | Field mustard | nucleus | 34.3 | 41.52 |
| PGSC0003DMT400056374 | Potato | nucleus | 31.88 | 41.38 |
| Solyc05g015840.2.1 | Tomato | nucleus | 30.68 | 40.71 |
| KRH50085 | Soybean | nucleus | 14.01 | 39.73 |
| KRH28893 | Soybean | nucleus | 11.84 | 33.56 |
| KRH55227 | Soybean | nucleus | 14.98 | 33.51 |
| KRH27270 | Soybean | nucleus | 14.98 | 33.16 |
| KRH22053 | Soybean | nucleus | 14.73 | 32.62 |
| KRH06918 | Soybean | nucleus | 28.74 | 32.6 |
| KRG94562 | Soybean | nucleus | 28.74 | 32.6 |
| KRG88838 | Soybean | nucleus | 14.73 | 32.11 |
| KRG88952 | Soybean | nucleus | 16.91 | 31.25 |
| KRH22367 | Soybean | nucleus | 11.84 | 31.01 |
| KRH71914 | Soybean | nucleus, plastid | 21.5 | 24.86 |
| KRH38141 | Soybean | nucleus, plastid | 21.74 | 24.13 |
| KRH66611 | Soybean | nucleus | 19.57 | 24.11 |
| KRH75288 | Soybean | nucleus | 16.67 | 24.04 |
| KRH48747 | Soybean | nucleus | 19.57 | 23.96 |
| KRG95361 | Soybean | nucleus | 20.77 | 23.96 |
| KRH67040 | Soybean | nucleus | 20.77 | 23.43 |
| KRH54739 | Soybean | nucleus | 21.01 | 22.89 |
| KRH75287 | Soybean | nucleus | 18.12 | 21.8 |
| KRG97402 | Soybean | nucleus | 22.22 | 21.25 |
| KRH48746 | Soybean | nucleus | 17.15 | 20.76 |
| KRH31506 | Soybean | nucleus | 21.98 | 20.54 |
| KRH66613 | Soybean | nucleus | 16.91 | 20.47 |
| KRH70968 | Soybean | nucleus | 23.43 | 20.12 |
| KRH75117 | Soybean | nucleus | 23.43 | 20.08 |
| KRH07602 | Soybean | nucleus | 9.9 | 18.98 |
| KRH63174 | Soybean | nucleus | 24.88 | 18.26 |
| KRH03167 | Soybean | nucleus | 23.67 | 18.01 |
| KRH56776 | Soybean | nucleus | 23.67 | 17.85 |
Protein Annotations
| EntrezGene:102664649 | MapMan:15.5.18 | Gene3D:4.10.1100.10 | EMBL:ACUP02003505 | EnsemblPlantsGene:GLYMA_06G168600 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0046872 | InterPro:IPR004333 | InterPro:IPR036893 | UniProt:K7KVJ3 | ProteinID:KRH54162.1 |
| ProteinID:KRH54163.1 | EnsemblPlants:KRH54164 | ProteinID:KRH54164 | ProteinID:KRH54164.1 | PFAM:PF03110 | PFscan:PS51141 |
| PANTHER:PTHR31251 | PANTHER:PTHR31251:SF20 | InterPro:SBP_dom | InterPro:SBP_sf | SUPFAM:SSF103612 | UniParc:UPI00023C35A8 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:14097075..14102202
Molecular Weight (calculated)
45338.9 Da
IEP (calculated)
8.512
GRAVY (calculated)
-0.694
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWNLKAPSW DLVDHVDKAT TLQQNIGTKE EQNRFGVYRM KGEFSVDLKL GHHHVGNSGT ESALANKSKD AAAASGAAAS AGVSKMASSP SGSSKRARTI
101: SSTSLTVSCL VDGCNSDLSN CRDYHRRHKV CELHSKTPEV TIAGLKQRFC QQCSRFHSLE QFDERKRSCR KRLDGHNRRR RKPQPEPLSR PGSFLSNYQG
201: TQLLPFSGPH VYASTAMVSP DWSGALVTSS ADARLHNHNH HHHQQDLFLG SSHKEGKQVA FLHSNHHPST LSNQNPPPFP SPSICHTLLR TRPLSETCGG
301: GARSKMFCES LTTTTTASNN NNNSLHDTIP CALSLLSSSQ THTPGGNGLN QMVQQPPPPS MSLMMQPLGL SLQDNNNNSL ESVDHCSSIY SLASDHHGSH
401: CNEAAPQLFP FQWE
101: SSTSLTVSCL VDGCNSDLSN CRDYHRRHKV CELHSKTPEV TIAGLKQRFC QQCSRFHSLE QFDERKRSCR KRLDGHNRRR RKPQPEPLSR PGSFLSNYQG
201: TQLLPFSGPH VYASTAMVSP DWSGALVTSS ADARLHNHNH HHHQQDLFLG SSHKEGKQVA FLHSNHHPST LSNQNPPPFP SPSICHTLLR TRPLSETCGG
301: GARSKMFCES LTTTTTASNN NNNSLHDTIP CALSLLSSSQ THTPGGNGLN QMVQQPPPPS MSLMMQPLGL SLQDNNNNSL ESVDHCSSIY SLASDHHGSH
401: CNEAAPQLFP FQWE
001: MDWNFKLSSG YLSGFDQEPD LSPMDGSISF GGSSQSKADF SFDLKLGRNI GNSSSVFGDT EQVISLSKWK DSALAKPEGS RSSSSKRTRG NGVGTNQMPI
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
101: CLVDGCDSDF SNCREYHKRH KVCDVHSKTP VVTINGHKQR FCQQCSRFHA LEEFDEGKRS CRKRLDGHNR RRRKPQPEHI GRPANFFTGF QGSKLLEFSG
201: GSHVFPTTSV LNPSWGNSLV SVAVAANGSS YGQSQSYVVG SSPAKTGIMF PISSSPNSTR SIAKQFPFLQ EEESSRTASL CERMTSCIHD SDCALSLLSS
301: SSSSVPHLLQ PPLSLSQEAV ETVFYGSGLF ENASAVSDGS VISGNEAVRL PQTFPFHWE
Arabidopsis Description
SPL13ASquamosa promoter-binding-like protein 13B [Source:UniProtKB/Swiss-Prot;Acc:P0DI11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.