CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03167	Soybean	nucleus	93.08	93.93
KRH63174	Soybean	nucleus	75.96	73.94
KRH54739	Soybean	nucleus	48.27	69.74
VIT_17s0000g05020.t01	Wine grape	nucleus	61.38	60.5
Solyc12g038520.1.1	Tomato	nucleus	41.71	51.23
PGSC0003DMT400059813	Potato	nucleus	41.71	50.22
KRH21401	Soybean	nucleus	11.11	44.2
KRH10909	Soybean	nucleus	10.56	42.03
KRH20415	Soybean	nucleus	10.56	40.85
KRH50085	Soybean	nucleus	10.56	39.73
KRH28893	Soybean	nucleus	10.56	39.73
KRG88952	Soybean	nucleus	15.12	37.05
KRH22367	Soybean	nucleus	10.2	35.44
CDX95958	Canola	nucleus	19.13	35.12
Solyc03g114850.2.1	Tomato	nucleus	16.76	34.72
Bra004363.1-P	Field mustard	nucleus	18.94	34.55
KRH27270	Soybean	nucleus	11.66	34.22
KRH22053	Soybean	nucleus	11.48	33.69
KRG88838	Soybean	nucleus	11.48	33.16
KRH55227	Soybean	nucleus	11.11	32.97
Bra038324.1-P	Field mustard	nucleus	19.31	32.52
CDY50300	Canola	nucleus	19.31	32.32
CDX96251	Canola	nucleus	19.13	32.01
CDY69014	Canola	nucleus	18.58	31.97
CDX81606	Canola	nucleus	19.13	31.53
KRH70968	Soybean	nucleus	25.68	29.25
KRH75117	Soybean	nucleus	25.5	28.99
KRG94562	Soybean	nucleus	18.76	28.22
AT1G69170.1	Thale cress	nucleus	20.77	28.15
KRH06918	Soybean	nucleus	18.58	27.95
KRH75287	Soybean	nucleus	17.49	27.91
KRH66613	Soybean	nucleus	16.39	26.32
KRH48746	Soybean	nucleus	16.21	26.02
KRH71914	Soybean	nucleus, plastid	16.94	25.98
PGSC0003DMT400063046	Potato	nucleus	24.41	25.97
KRH59812	Soybean	nucleus	18.4	25.9
KRH41121	Soybean	nucleus	18.58	25.76
KRH38141	Soybean	nucleus, plastid	17.3	25.47
KRH48747	Soybean	nucleus	15.66	25.44
KRH63786	Soybean	nucleus	17.12	25.34
KRH75288	Soybean	nucleus	13.11	25.09
KRH66611	Soybean	nucleus	15.3	25.0
KRG95361	Soybean	nucleus	16.03	24.51
KRH54164	Soybean	nucleus	17.85	23.67
KRH67040	Soybean	nucleus	15.66	23.43
KRG97402	Soybean	nucleus	16.94	21.48
KRH31506	Soybean	nucleus	17.3	21.44
KRH07602	Soybean	nucleus	8.38	21.3

Protein Annotations

EntrezGene:100817547	MapMan:15.5.18	Gene3D:4.10.1100.10	EMBL:ACUP02002797	ncoils:Coil	EnsemblPlantsGene:GLYMA_05G019000
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0046872	InterPro:IPR004333	InterPro:IPR036893	UniProt:K7K0P9
EnsemblPlants:KRH56776	ProteinID:KRH56776	ProteinID:KRH56776.1	ProteinID:KRH56777.1	PFAM:PF03110	PFscan:PS51141
PANTHER:PTHR31251	PANTHER:PTHR31251:SF22	InterPro:SBP_dom	InterPro:SBP_sf	SUPFAM:SSF103612	UniParc:UPI00023C037E
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:1691393..1696849

Molecular Weight (calculated)

60059.8 Da

IEP (calculated)

6.980

GRAVY (calculated)

-0.566

Length

549 amino acids

Sequence
(BLAST)

001: MESWSYVPEE KECVSNEALS PPNTLGRSKN SFLGWELKTP CGFSNDMLGL GHHSIENQGF EELGFPEMLG KHMSDDLIGS VPTRKVNGNR QQQHSDRITG
101: TVVDAPSGFS QRGDSNSKLS NSNSLIDLKL GRFADHGDFT DRAFSKVLSS SESSTPPKRV RASGLHSQTA YCQVYGCNKD LSSCKDYHKR HKVCEVHSKT
201: AIVIVNGIEQ RFCQQCSRFH LLAEFDDGKR SCRKRLAGHN ERRRKPQMGI HPGKSGRLLQ PCGDSRFQGS MLTSSFICPE MLPSGVTCSE KYGMSDFWRP
301: IKAEHGTGFR NLSSMAATNG HPPSRSLFPS YNGNQFPFLH ENSATSTTGS IFCESNSPYP SALGAQNSGL RPLFQDTVGN ENFNVFDTSS TVQGLSGISD
401: SCCALSLLSS QSQNSSSQSS GIPLAHSLVI PSSHSHNYNM SQVSEKIGIS SQTSSSRVSD SFPSELNHAD GSHLSPVLIS DNNCIVNFDM ADGIFQASDY
501: LNVKDHLSGE DGATIDLLQL SSQLQRVEHE RQSLQVKQEN DSSCTLRIT

Best Arabidopsis Sequence Match ( AT1G69170.1 )
(BLAST)

001: MDSWSYGRSV FMSNETLLPC DTFAKNRRFE QRLSNNDDVL ISDMAGNSNG FSAVSITKVV PEEEDEENIS SSSKFSSQEL NRIDFKLRSF LDLGNDDDDT
101: SSRGFALPSK KSRASNLCSQ NPLCQVYGCS KDLSSSKDYH KRHRVCEAHS KTSVVIVNGL EQRFCQQCSR FHFLSEFDDG KRSCRRRLAG HNERRRKPAF
201: YFLPGKRHKL LRTSQDVVGN KFLENSSLVL PESFPGSLLY RVIDEDDHRT SRLVSFKDEP TCSMFPTNEQ NSSRTYESKP AIYSTEVSSI WDLHETAASR
301: STRALSLLSA QSQQHLSKFP NTTFSITQPN QNLNHSSSTD YHQMEQPLWI DPGKTNSAGS SSCKGKGTST VDLLQLSSHL QRIEQQRNYT GDVKQEYNEL
401: YFPGS

Arabidopsis Description

SPL6Squamosa promoter-binding-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q94JW8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.